Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 B9D2 Gene 0 21.92 11.58 17.21 7.89 9.84 5.60 5.07 11.47 13.53 13.72 26.22 6.05 4.81 39.90 61.05 21.54 33.84 20.21 24.90 21.15 22.02 22.55 20.07 2 243578 Transcript 0 18.92 11.50 23.08 6.75 8.01 6.71 4.17 11.66 12.57 13.04 24.15 5.46 3.17 34.79 55.35 22.65 38.21 18.48 25.82 19.97 20.94 22.93 17.09 3 IG9 Intergenic 0 25.50 28.34 37.87 29.47 36.30 23.28 9.07 36.84 43.08 33.21 11.60 12.15 17.51 26.96 31.38 38.14 23.46 44.08 78.44 40.90 23.35 8.38 32.01 4 IG9_SR2 SilentIntergenicRegion 0 19.90 21.31 26.33 15.35 44.89 38.86 10.06 26.77 32.75 22.37 9.59 12.76 16.13 30.05 25.98 51.80 23.62 26.17 79.65 23.35 24.08 8.08 37.11 5 IG9_AR2 ActiveIntergenicRegion 0 20.86 29.75 36.76 24.59 35.57 21.93 6.36 39.13 42.91 34.93 10.68 6.87 7.27 23.70 27.00 22.90 17.67 39.90 47.61 32.12 17.67 12.16 22.66 6 IG9_SR1 SilentIntergenicRegion 0 21.18 26.86 35.12 32.51 39.61 18.28 9.45 35.21 41.39 29.36 10.71 14.18 21.02 26.82 32.16 35.64 23.84 41.47 80.60 39.64 20.03 7.38 26.74 7 IG9_AR1 ActiveIntergenicRegion 0 46.39 37.49 57.23 41.27 20.59 21.29 10.03 48.51 57.75 51.58 16.74 12.13 21.03 27.66 39.48 46.41 28.40 72.66 104.12 70.57 36.59 7.22 49.42 8 ER1a ExonRegion 0 74.20 41.16 27.15 20.20 24.95 14.43 12.79 22.86 30.24 23.15 32.05 4.60 3.38 30.51 45.99 46.42 52.38 51.41 84.37 49.33 37.78 25.38 45.83 9 E1_Da NovelBoundary 0 15.11 9.14 1.15 3.43 0.00 5.79 0.00 2.18 4.66 1.58 4.79 0.00 0.00 7.36 4.45 7.78 12.53 4.02 13.46 5.56 8.83 3.06 3.41 10 E1a_E2a KnownJunction 1 3.56 6.18 30.57 7.39 0.00 0.00 1.72 8.21 12.09 8.89 37.22 6.30 0.00 19.42 87.03 14.78 66.11 10.11 21.65 11.89 27.55 25.53 12.55 11 E2_Aa NovelBoundary 0 10.67 6.05 4.58 5.83 3.99 2.16 0.00 6.94 1.79 9.24 0.00 0.00 0.00 0.00 4.45 3.93 9.54 0.00 16.19 2.62 8.71 2.39 8.45 12 ER2a ExonRegion 0 7.64 3.89 27.14 7.67 4.68 1.81 1.34 8.06 10.43 14.00 19.50 7.48 6.32 48.49 85.59 29.40 42.09 14.30 27.49 18.96 18.25 40.45 17.78 13 E2_Da NovelBoundary 0 17.93 2.89 8.22 3.13 18.59 0.00 0.00 4.35 12.93 5.67 0.00 0.00 0.00 9.36 5.56 4.36 8.42 7.50 0.00 3.20 16.43 5.57 29.54 14 E2a_E3a KnownJunction 0 3.41 6.38 17.21 0.00 8.06 4.32 0.00 7.68 5.50 9.83 7.26 0.00 0.00 16.13 27.07 26.92 12.81 9.12 18.17 15.08 8.22 11.27 4.35 15 I2 Intron 0 13.17 1.94 3.76 2.85 11.15 1.20 1.60 3.75 4.34 1.20 2.23 4.56 4.50 5.29 9.75 4.03 6.30 1.62 2.88 2.35 1.88 2.72 7.52 16 I2_SR1 SilentIntronRegion 0 12.19 2.79 6.51 1.11 8.07 2.51 2.18 7.06 7.07 3.75 2.12 1.96 3.38 8.83 12.07 6.52 8.15 1.51 4.37 4.67 4.83 3.43 7.25 17 I2_SR2 SilentIntronRegion 0 17.14 1.77 2.84 2.97 13.27 0.24 1.30 2.64 4.32 0.46 2.06 6.03 7.36 6.23 11.00 4.41 3.77 1.98 2.83 0.83 1.20 1.78 5.80 18 I2_AR2 ActiveIntronRegion 0 11.03 1.69 2.38 1.15 14.81 2.08 2.71 6.26 4.57 0.00 5.48 5.97 2.76 5.20 14.80 3.14 10.12 3.57 6.02 1.28 4.87 3.03 8.58 19 E3_Aa NovelBoundary 0 21.78 0.00 0.00 1.47 0.00 2.73 0.00 5.09 4.69 0.00 2.68 0.00 0.00 2.41 28.56 6.58 3.55 1.99 12.99 2.68 3.03 0.00 4.10 20 ER3a ExonRegion 0 13.35 12.96 20.61 5.26 12.83 13.10 9.16 9.15 9.55 12.29 21.89 8.18 8.23 34.94 59.20 15.54 24.47 16.38 11.86 12.95 18.49 14.09 13.40 21 E3_Da NovelBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.26 3.39 0.00 0.00 0.00 0.00 0.00 8.90 0.00 8.98 5.14 0.00 6.39 5.68 0.00 16.48 22 E3a_E4a KnownJunction 0 19.78 6.18 26.91 1.90 0.00 11.36 1.68 16.51 10.27 11.95 24.64 5.85 0.00 51.62 20.52 11.28 40.58 15.30 7.53 16.68 17.61 23.09 11.52 23 E4_Aa NovelBoundary 0 14.67 0.00 3.43 0.00 0.00 2.90 0.00 2.14 9.40 3.12 5.26 0.00 0.00 7.36 4.45 4.27 0.00 1.70 3.58 3.26 2.47 0.00 4.35 24 ER4a ExonRegion 0 10.50 3.74 12.00 4.84 5.53 1.99 2.50 9.13 9.92 11.19 26.47 5.81 4.28 42.40 62.08 14.24 29.07 12.73 9.70 14.91 18.69 20.73 14.23