Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C19orf61 Gene 0 100.61 82.20 117.78 87.60 50.63 43.68 34.18 99.43 77.31 95.95 150.49 44.67 62.09 164.85 224.83 125.10 126.06 190.02 130.56 123.64 112.02 82.78 79.69 2 270066 Transcript 0 132.22 102.79 140.90 98.06 68.63 51.72 42.77 128.09 98.59 119.93 185.94 64.04 87.07 208.88 267.42 154.70 155.31 234.02 158.25 154.51 137.06 109.42 103.80 3 IG24_AR2 ActiveIntergenicRegion 0 3.40 1.54 5.02 0.39 1.79 0.98 3.08 0.92 0.00 2.44 6.33 5.18 0.77 15.61 11.99 5.81 7.94 3.08 0.00 2.27 1.10 0.00 0.00 4 IG24_SR2 SilentIntergenicRegion 0 2.51 1.61 2.60 0.68 0.20 1.06 4.79 0.74 2.26 2.85 10.13 12.84 3.90 13.97 12.92 18.19 11.49 7.53 0.00 6.78 0.76 0.00 0.00 5 IG24_AR1 ActiveIntergenicRegion 0 2.12 0.00 3.68 1.36 0.00 0.00 1.32 0.00 3.50 1.34 9.99 7.22 4.69 16.78 15.96 18.82 8.25 4.31 0.00 6.03 0.00 0.00 0.00 6 IG24_SR1 SilentIntergenicRegion 0 3.51 0.35 1.68 0.24 1.36 0.94 3.21 0.44 2.04 2.65 8.81 4.79 2.78 8.56 11.00 10.64 9.62 3.47 0.54 2.40 0.00 0.00 0.00 7 ER1a ExonRegion 1 57.25 23.87 31.97 18.84 16.88 31.87 16.52 24.04 21.14 32.62 73.38 3.07 7.65 108.58 128.54 85.05 62.34 112.59 148.24 61.19 58.68 42.99 51.34 8 E1a_E2a KnownJunction 0 10.96 25.39 66.47 40.02 31.58 20.61 23.32 72.82 56.16 52.43 76.18 6.30 40.91 329.74 265.41 125.69 61.24 261.90 103.34 102.71 76.30 84.87 59.33 9 ER2a ExonRegion 0 16.77 43.73 66.98 39.94 30.36 53.66 28.13 71.28 64.33 79.02 134.99 17.62 39.23 130.82 181.79 97.97 136.31 154.63 87.13 103.30 117.69 60.62 53.84 10 E2a_E3a KnownJunction 1 123.73 79.06 110.52 66.23 42.78 59.68 26.72 125.60 99.22 142.72 189.57 25.21 101.29 183.94 182.95 135.01 194.76 285.61 159.06 181.40 139.31 95.28 61.97 11 ER3a ExonRegion 0 117.51 51.38 107.91 82.46 20.66 36.87 18.66 123.48 100.41 139.08 182.03 28.17 73.41 270.47 253.80 150.75 177.06 202.74 133.83 170.04 123.08 113.29 66.37 12 E3a_E4a KnownJunction 1 107.43 33.68 132.25 71.29 16.21 5.68 20.58 137.47 112.56 148.25 90.97 6.30 19.32 80.05 212.37 34.61 170.55 76.61 33.60 175.45 73.70 79.24 36.02 13 ER4a ExonRegion 0 38.62 36.57 39.51 27.07 17.90 18.10 12.82 46.66 44.27 58.92 77.99 10.24 33.38 95.90 128.62 51.60 72.71 79.25 56.88 94.20 66.88 40.86 32.14 14 E4a_E5a KnownJunction 0 102.39 88.08 62.27 48.81 39.05 37.65 35.29 93.94 53.53 75.80 119.56 17.26 33.93 155.10 209.16 96.38 147.26 196.03 99.67 138.64 128.19 70.11 68.46 15 ER5a ExonRegion 1 70.26 85.00 68.60 50.50 38.22 49.08 38.18 73.32 69.94 68.70 169.13 16.66 51.97 175.80 183.02 104.75 130.08 190.70 83.05 124.55 126.29 68.46 72.46 16 E5a_E6a KnownJunction 0 93.35 63.15 103.54 51.11 80.05 50.43 46.55 91.92 93.32 78.33 205.10 28.21 53.24 182.35 183.20 129.97 134.27 181.52 77.93 93.38 168.71 88.73 91.94 17 E5a_E7a NovelJunction 0 3.26 22.36 7.86 18.55 0.00 0.00 1.68 20.66 15.31 7.58 20.90 0.00 0.00 10.30 10.14 10.42 16.18 54.18 33.60 37.46 3.03 14.57 3.24 18 I5 Intron 0 20.40 7.72 6.23 5.98 6.96 3.36 6.32 3.62 4.32 4.23 1.73 3.69 5.65 1.64 8.04 8.24 8.59 14.34 8.56 9.35 3.94 1.15 4.88 19 I5_SR1 SilentIntronRegion 0 20.43 7.73 6.24 5.99 6.97 3.37 6.33 3.63 4.32 4.23 1.73 3.70 5.66 1.64 8.05 8.25 8.60 14.36 8.57 9.36 3.95 1.16 4.89 20 ER6a ExonRegion 0 87.26 80.25 114.43 80.11 47.41 28.68 24.03 137.08 91.61 117.81 216.35 62.30 67.11 209.48 282.17 169.31 153.68 279.76 184.27 166.41 154.51 131.26 137.55 21 E6_Da NovelBoundary 0 6.74 0.00 9.99 0.00 19.95 0.00 8.08 9.45 6.08 4.46 0.00 0.00 6.33 0.00 4.45 3.25 4.77 16.42 20.05 8.25 0.00 6.25 15.79 22 E6a_E7a KnownJunction 0 317.98 127.94 164.63 111.37 80.14 41.28 28.00 173.33 117.13 149.86 288.92 74.57 146.74 277.18 343.04 169.61 200.37 296.43 222.03 185.87 181.87 211.01 154.68 23 ER7a ExonRegion 0 134.80 154.01 177.69 121.53 118.14 75.51 52.56 175.02 130.84 179.94 290.63 95.09 124.91 242.39 306.50 180.11 209.81 315.98 206.57 209.16 201.38 168.62 124.60 24 E7a_E8a KnownJunction 0 80.76 136.16 182.73 137.21 142.95 109.48 92.61 206.64 173.35 157.25 268.38 139.55 143.01 259.52 410.66 265.49 136.89 387.96 339.49 239.50 186.07 186.39 187.03 25 E8_Aa NovelBoundary 0 3.04 10.06 23.24 21.58 4.16 21.12 20.23 17.05 3.30 14.45 2.00 0.00 6.82 2.47 5.81 25.04 21.51 18.65 4.14 15.60 4.82 13.53 7.34 26 ER8a ExonRegion 0 137.24 135.42 197.26 140.59 112.05 85.04 86.55 225.01 169.13 194.13 284.52 137.42 188.63 292.10 503.76 286.56 260.46 336.14 338.01 225.49 199.14 222.59 232.39 27 E8_Da NovelBoundary 1 44.97 27.96 33.41 45.58 25.38 0.00 15.72 12.40 20.05 22.35 9.53 11.25 6.82 12.01 34.74 55.80 13.18 102.39 54.97 47.23 20.51 21.55 16.30 28 E8a_E9a KnownJunction 0 116.47 118.73 151.50 87.23 84.80 46.00 32.33 197.85 128.73 164.72 257.85 133.69 170.93 223.50 457.88 196.27 220.66 271.77 349.75 241.86 202.57 181.56 142.56 29 I8 Intron 0 10.15 12.41 9.95 13.28 9.91 7.19 6.07 6.18 4.01 7.82 12.22 6.16 5.05 11.24 16.25 10.36 18.71 27.23 21.52 32.46 11.05 5.45 13.44 30 I8_AR1 ActiveIntronRegion 0 6.85 12.35 8.13 18.09 10.83 4.45 5.91 8.34 3.72 8.30 13.30 7.22 7.82 15.08 18.44 12.03 22.71 34.21 28.36 28.42 13.38 8.43 15.45 31 I8_SR1 SilentIntronRegion 0 14.26 12.72 12.30 7.82 9.01 10.59 6.36 3.72 4.43 7.40 11.16 5.02 1.86 6.89 13.96 8.58 14.29 19.45 13.79 37.88 8.48 2.00 11.30 32 E9_Aa NovelBoundary 0 3.19 15.52 31.93 31.20 7.47 10.79 2.16 26.33 18.32 18.56 34.11 12.60 6.82 14.42 38.57 18.29 21.22 150.43 44.99 39.25 26.50 13.84 56.43 33 ER9a ExonRegion 0 80.28 101.70 137.06 75.70 67.05 51.62 32.10 156.20 117.02 139.99 248.65 122.94 159.73 220.75 298.86 193.02 206.84 291.94 199.34 178.80 178.96 150.06 126.58 34 E9_Da NovelBoundary 1 14.15 15.13 56.62 43.12 4.16 5.51 21.86 61.28 57.38 51.52 47.64 18.61 13.64 53.03 33.75 31.96 101.54 132.07 95.91 69.61 65.61 37.54 27.83 35 E9a_E10a KnownJunction 0 143.66 130.83 131.96 69.85 94.91 97.33 35.73 107.04 101.16 101.19 195.26 154.10 120.93 234.98 272.58 262.07 213.74 261.74 149.93 105.34 132.82 137.90 151.69 36 I9 Intron 0 21.59 29.66 29.64 39.20 27.15 13.68 21.13 23.02 24.22 28.50 23.32 15.99 15.69 37.28 31.51 33.90 28.96 48.76 43.84 36.41 19.09 19.88 25.45 37 I9_SR1 SilentIntronRegion 0 19.72 27.08 28.25 39.64 31.07 11.75 24.72 25.03 25.39 27.01 24.39 13.75 20.62 40.91 35.49 34.77 35.93 62.17 38.42 44.38 22.48 19.15 29.07 38 I9_AR1 ActiveIntronRegion 0 27.48 42.34 40.45 49.93 28.94 19.82 21.49 26.59 29.46 39.12 27.23 21.87 11.96 40.60 30.51 41.04 24.98 42.03 64.09 32.91 19.02 26.49 26.75 39 E10_Aa NovelBoundary 1 221.45 239.63 186.57 207.53 105.77 33.62 46.33 98.00 64.67 71.69 30.06 24.76 39.28 68.34 55.01 91.94 29.64 116.82 52.99 67.11 39.48 58.17 43.11 40 ER10a ExonRegion 0 369.22 338.83 198.44 117.45 143.11 89.26 74.86 148.78 110.49 143.52 227.02 109.41 177.74 241.04 408.67 215.33 231.68 286.21 262.54 168.80 182.85 138.35 155.01 41 E10a_E11a KnownJunction 0 185.07 175.17 189.32 100.89 86.84 31.23 59.09 135.01 86.69 146.37 215.00 57.02 93.18 208.14 247.61 167.31 172.79 250.05 150.12 140.68 113.92 81.44 106.45 42 I10 Intron 0 10.79 10.19 12.65 19.61 8.29 4.84 5.91 11.26 9.39 12.30 6.16 0.97 4.72 4.90 5.28 4.87 8.12 9.79 5.80 6.98 10.03 5.50 10.17 43 I10_AR1 ActiveIntronRegion 0 10.98 10.15 13.89 21.52 8.42 5.06 5.75 12.38 10.00 12.90 6.50 0.75 4.21 4.67 5.77 5.02 8.76 10.62 6.36 7.52 10.07 6.18 10.66 44 E11_Aa NovelBoundary 0 7.56 9.41 5.32 34.03 6.79 13.91 2.08 14.13 13.72 14.94 10.53 6.30 0.00 7.30 11.50 32.13 13.28 25.66 8.66 6.01 14.09 5.69 15.62 45 ER11a ExonRegion 0 185.02 147.42 191.80 159.13 94.32 71.86 56.32 152.58 112.82 146.09 181.39 94.41 81.25 204.14 264.36 187.24 165.72 268.69 164.67 159.14 161.71 112.88 105.04 46 E11_Da NovelBoundary 0 53.19 16.44 26.64 35.13 16.55 16.58 11.22 17.46 12.09 14.26 20.27 0.00 6.82 19.72 10.75 37.26 14.03 66.91 17.98 11.63 12.11 14.21 16.22 47 E11a_E12a KnownJunction 0 203.67 107.55 181.84 152.66 110.78 67.80 72.21 128.48 108.77 135.89 148.09 57.02 80.68 219.97 208.30 128.68 89.85 193.55 111.34 155.19 116.57 95.83 120.96 48 I11_SR1 SilentIntronRegion 0 18.92 12.13 15.79 17.56 18.35 3.28 5.13 12.29 10.97 8.16 12.68 3.19 9.30 7.18 10.79 11.52 11.81 33.41 21.85 12.06 13.14 9.33 5.26 49 ER12a ExonRegion 0 188.98 128.65 223.67 191.12 92.88 74.60 56.07 136.35 123.58 149.63 204.89 79.54 106.38 239.29 281.26 178.21 147.52 322.90 173.02 184.97 149.03 109.57 127.46 50 E12_Da NovelBoundary 0 10.37 25.00 13.01 23.24 7.98 5.00 8.79 35.49 15.68 18.56 12.00 0.00 13.64 10.07 9.64 7.69 24.96 51.65 12.24 14.76 21.00 8.21 0.00 51 E12a_E13a KnownJunction 0 208.70 136.49 217.59 156.69 86.76 65.93 76.53 149.47 103.38 144.11 204.16 103.53 74.18 280.95 288.77 198.32 136.98 214.19 191.53 186.25 156.98 108.63 133.34 52 I12 Intron 0 18.16 14.86 22.34 30.01 6.80 2.62 5.05 19.64 11.70 8.69 6.76 3.88 4.56 3.42 13.94 13.22 14.68 45.83 22.27 15.89 7.36 6.62 7.00 53 I12_SR1 SilentIntronRegion 0 18.27 14.96 22.48 30.19 6.84 2.63 5.08 19.76 11.77 8.74 6.80 3.91 4.59 3.44 14.02 13.30 14.77 46.11 22.41 15.99 7.41 6.66 7.04 54 E13_Aa NovelBoundary 0 33.34 28.02 21.73 24.44 12.39 8.46 10.55 32.57 12.64 15.71 8.74 0.00 0.00 7.12 8.90 20.25 17.67 45.56 57.32 27.42 5.62 6.18 7.85 55 ER13a ExonRegion 0 122.45 83.42 205.15 172.87 63.90 50.94 43.01 124.99 108.60 109.80 186.72 73.66 70.09 213.67 268.18 149.22 135.52 273.44 114.87 154.66 115.23 74.63 73.54 56 E13_Da NovelBoundary 0 23.04 17.30 20.58 17.85 10.44 19.25 9.49 24.85 15.94 13.65 21.85 6.30 6.82 7.24 24.35 30.42 4.02 40.67 25.04 48.83 11.00 16.23 18.78 57 E13a_E14a KnownJunction 0 189.81 90.18 222.67 176.10 61.21 22.20 38.02 153.41 103.64 107.50 180.31 55.67 66.72 245.04 261.45 134.84 140.63 203.04 71.72 142.09 114.84 51.80 85.19 58 I13_SR1 SilentIntronRegion 0 19.93 11.11 20.86 19.52 10.86 4.03 6.18 12.71 10.20 8.77 9.07 1.84 3.81 7.08 12.71 9.75 11.99 31.82 9.19 15.94 5.72 8.36 13.74 59 ER14a ExonRegion 0 80.28 52.76 126.49 100.93 31.96 24.11 27.93 90.67 60.16 74.45 103.30 20.10 24.44 114.89 187.38 83.42 83.71 123.23 60.85 82.65 73.47 47.27 44.66 60 IG23_SR4 SilentIntergenicRegion 0 4.61 4.06 3.65 6.27 3.40 2.33 4.81 16.36 7.68 7.75 5.61 3.24 8.31 3.54 8.33 9.17 5.39 18.16 8.67 11.97 2.00 6.05 11.19 61 IG23_SR3 SilentIntergenicRegion 0 15.20 6.07 14.49 11.39 6.44 3.40 8.91 13.28 12.92 10.15 8.17 12.99 1.78 9.26 14.81 8.35 16.64 15.54 10.18 17.14 4.55 11.94 14.31 62 IG23_AR1 ActiveIntergenicRegion 0 14.91 5.95 12.22 9.33 7.42 2.94 5.23 17.74 10.30 4.80 8.45 4.93 7.41 5.41 6.59 11.28 12.62 15.40 10.90 13.43 4.82 7.18 17.23