Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF574 Gene 0 32.28 37.00 91.83 38.36 20.16 47.37 17.43 59.31 44.68 85.57 89.18 26.83 22.76 86.26 100.01 91.81 72.66 108.69 72.76 57.40 56.51 38.19 39.46 2 222339 Transcript 0 0.86 0.00 2.05 0.83 0.00 0.37 0.68 2.55 1.50 1.57 0.00 0.00 0.00 0.00 0.21 0.00 0.00 1.55 4.87 1.31 0.01 0.21 0.56 3 359044 Transcript 1 15.77 22.36 21.97 14.20 5.68 20.70 16.70 13.82 14.18 31.02 32.18 0.61 8.01 26.04 35.16 54.11 31.87 76.68 41.01 29.41 27.17 13.17 33.24 4 ER1a ExonRegion 0 1.73 0.00 4.10 1.66 0.00 0.75 1.35 3.01 3.00 3.14 0.01 0.00 0.00 0.00 0.42 0.00 0.00 1.44 9.75 2.61 0.03 0.43 1.13 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 6 I1_AR1 ActiveIntronRegion 0 4.12 16.82 14.37 3.84 1.07 19.71 9.76 20.04 21.07 32.67 0.00 0.00 0.00 0.42 0.82 0.00 7.89 26.50 56.19 69.36 4.61 5.45 6.95 7 I1_AR2 ActiveIntronRegion 0 0.00 10.17 2.45 1.36 0.00 5.50 0.00 3.46 3.88 16.22 0.00 0.00 0.00 1.62 0.00 0.00 9.90 3.70 31.85 32.22 2.20 2.68 0.00 8 I1_AR3 ActiveIntronRegion 0 0.00 6.49 2.33 0.92 0.00 3.79 0.00 1.23 1.83 9.80 0.00 0.00 0.00 0.00 0.00 0.00 7.67 1.91 18.19 15.44 1.99 0.60 0.00 9 I1_SR2 SilentIntronRegion 0 0.74 3.70 1.70 1.18 0.93 3.69 0.89 2.85 3.86 9.32 0.00 0.99 0.00 0.00 0.24 0.00 2.02 5.37 34.13 15.25 4.14 2.91 3.42 10 I1_AR6 ActiveIntronRegion 1 0.00 0.00 5.30 3.59 0.00 0.00 0.02 3.27 1.46 2.12 4.91 29.71 0.00 0.52 0.04 0.00 2.08 2.33 0.00 5.73 0.24 1.76 7.59 11 I1_SR4 SilentIntronRegion 1 0.89 0.44 6.94 10.54 3.01 0.89 2.78 6.97 7.47 11.38 6.36 40.29 2.29 0.40 2.04 0.00 2.92 3.48 5.13 7.98 3.28 2.10 1.84 12 I1_AR7 ActiveIntronRegion 1 1.76 6.95 4.19 10.55 9.42 7.50 12.28 11.20 10.09 10.23 6.78 46.84 1.52 2.15 2.45 0.42 3.43 4.42 12.87 10.11 2.86 2.11 5.22 13 I1_AR8 ActiveIntronRegion 1 4.23 16.27 5.58 13.63 30.62 15.49 74.14 19.01 7.55 12.23 7.52 62.06 0.00 2.71 5.80 2.97 6.60 6.36 35.04 19.86 11.26 0.00 9.14 14 I1_AR9 ActiveIntronRegion 1 0.58 3.26 12.10 20.68 8.70 6.10 11.41 15.50 9.04 10.57 6.84 32.86 2.66 1.89 6.27 5.50 10.79 5.42 47.15 19.17 10.07 0.02 12.04 15 ER2a ExonRegion 1 25.03 27.95 15.20 14.89 8.22 34.13 16.84 13.11 11.09 26.85 48.47 1.22 2.71 32.13 48.08 88.23 42.80 88.52 44.27 31.53 37.71 23.23 51.20 16 E2a_E3a KnownJunction 0 6.52 16.77 28.74 13.52 3.14 7.27 16.56 14.54 17.27 35.19 15.90 0.00 13.31 19.95 22.25 19.99 20.94 64.83 37.74 27.29 16.62 3.12 15.28 17 ER3a ExonRegion 0 35.20 40.55 103.03 42.61 22.45 51.95 18.81 66.34 49.86 95.42 98.70 30.36 25.67 96.20 110.97 99.69 80.25 118.70 79.48 63.30 62.19 42.11 42.09 18 IG29 Intergenic 0 97.28 41.25 90.69 117.84 227.59 95.50 53.26 295.84 100.99 209.63 209.39 119.71 195.90 172.03 253.14 187.09 207.64 26.44 42.83 68.79 39.55 48.87 87.43 19 IG29_AR3 ActiveIntergenicRegion 0 4.98 7.69 7.49 6.76 5.71 5.26 3.41 4.11 9.37 8.91 7.85 0.00 0.00 1.60 3.33 0.00 1.77 13.00 11.65 9.19 1.37 1.30 6.30 20 IG29_SR3 SilentIntergenicRegion 0 7.48 4.59 2.18 6.98 10.06 2.01 4.05 14.70 10.13 9.71 4.55 6.75 9.98 5.04 11.02 12.44 4.89 5.37 3.19 14.23 3.60 0.55 7.89 21 IG29_AR5 ActiveIntergenicRegion 0 158.65 63.33 161.83 208.58 396.56 161.96 89.76 533.16 177.55 370.99 370.01 207.66 352.52 292.85 437.65 325.51 358.24 42.76 72.82 116.03 66.50 88.58 153.97 22 IG29_SR4 SilentIntergenicRegion 0 164.40 72.30 90.53 133.13 298.35 141.72 78.14 306.47 112.11 239.45 266.84 168.78 208.87 274.03 369.11 255.50 304.82 28.77 45.84 81.61 63.91 50.92 99.50