Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DMPK Gene 0 65.09 48.82 184.10 47.54 51.44 53.85 32.16 139.04 194.83 168.86 35.11 14.05 11.72 54.43 66.41 74.80 50.12 103.40 79.76 47.52 194.28 95.10 137.98 2 291270 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 458663 Transcript 0 16.60 19.47 63.84 15.78 7.89 8.06 9.54 31.42 68.69 40.78 4.79 0.00 0.00 21.31 22.50 14.27 12.44 34.32 14.12 8.95 48.74 36.25 20.57 4 447742 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 342805 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 377750 Transcript 0 0.00 0.00 42.92 5.79 0.00 0.00 0.00 35.22 49.65 33.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.24 0.00 0.00 0.00 0.00 0.00 7 343373 Transcript 0 59.53 37.65 102.78 35.91 58.87 51.22 38.25 121.92 144.93 120.21 24.83 12.22 11.63 41.74 46.05 62.55 52.87 77.46 57.97 36.05 152.98 96.68 149.61 8 348168 Transcript 0 0.00 2.43 6.89 0.00 3.48 0.00 2.16 2.55 1.48 7.04 2.37 0.00 0.00 0.00 4.45 0.00 0.00 8.42 0.00 3.26 3.15 2.51 15.79 9 354227 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 IG31 Intergenic 0 15.33 12.96 47.31 13.83 16.28 15.94 7.29 44.84 62.83 64.14 15.97 12.80 13.35 24.98 12.31 27.20 26.86 24.21 45.69 16.95 58.74 28.07 49.47 11 IG31_AR1 ActiveIntergenicRegion 0 15.33 12.96 47.31 13.83 16.28 15.94 7.29 44.84 62.83 64.14 15.97 12.80 13.35 24.98 12.31 27.20 26.86 24.21 45.69 16.95 58.74 28.07 49.47 12 ER1a ExonRegion 0 15.74 16.14 28.03 4.26 30.30 16.50 11.88 30.20 42.35 52.18 7.92 2.22 2.46 23.29 19.40 30.98 20.75 37.39 28.75 17.58 69.80 45.32 46.25 13 E1_Ab KnownBoundary 0 24.97 36.77 64.81 15.92 46.77 29.13 12.63 76.15 107.26 121.25 19.37 0.00 0.00 22.60 43.88 30.42 20.57 106.78 26.07 26.08 115.15 55.48 71.96 14 ER1b ExonRegion 1 16.06 12.79 81.27 13.38 20.84 25.29 10.76 56.99 95.52 114.26 24.90 1.93 2.63 33.22 38.48 40.31 32.00 76.61 51.88 24.21 170.71 60.82 90.43 15 E1_Da NovelBoundary 0 0.00 2.43 37.17 20.88 19.61 15.67 12.41 25.51 66.75 58.18 16.95 0.00 0.00 14.19 22.25 21.53 35.06 44.48 40.57 33.30 92.54 46.54 63.34 16 E1a_E2c KnownJunction 0 0.00 12.89 101.68 9.52 24.11 22.20 2.21 55.45 48.67 74.06 12.85 0.00 0.00 22.43 28.56 46.91 8.79 47.46 87.53 11.25 87.60 32.27 31.07 17 I1 Intron 0 43.05 17.19 82.75 20.54 27.07 36.47 21.56 95.59 133.26 126.83 28.86 16.37 18.44 39.99 58.64 57.97 50.78 77.57 73.28 28.90 157.30 93.12 115.48 18 I1_AR1 ActiveIntronRegion 0 43.10 17.21 82.86 20.57 27.11 36.52 21.59 95.72 133.45 127.00 28.90 16.39 18.46 40.04 58.72 58.05 50.85 77.67 73.38 28.94 157.51 93.25 115.64 19 E2_Aa NovelBoundary 0 118.69 36.31 79.51 26.34 27.50 49.57 35.11 103.71 108.53 113.79 9.69 24.61 33.93 29.55 70.21 42.81 38.80 93.81 72.66 30.10 139.86 114.08 176.19 20 ER2a ExonRegion 0 59.53 37.65 102.78 35.91 58.87 51.22 38.25 121.92 144.93 120.21 24.83 12.22 11.63 41.74 46.05 62.55 52.87 77.46 57.97 36.05 152.98 96.68 149.61 21 E2_Ab KnownBoundary 0 107.65 43.74 98.43 46.21 92.95 51.05 64.04 121.00 150.72 138.18 27.64 11.55 13.47 43.68 56.99 78.95 69.85 96.09 69.18 24.93 173.29 153.51 166.20 22 ER2b ExonRegion 0 69.39 32.86 92.86 32.52 56.19 52.04 38.25 91.98 135.98 122.47 30.41 9.32 9.01 45.14 40.48 59.83 49.01 77.28 67.35 29.94 133.19 84.15 132.55 23 E2_Ac KnownBoundary 0 67.42 30.98 85.15 33.23 55.43 55.25 21.15 84.04 120.83 95.92 16.58 18.16 0.00 39.73 37.95 42.98 38.62 40.38 63.53 23.01 102.92 50.40 96.29 24 ER2c ExonRegion 0 58.68 47.89 213.01 42.61 82.24 73.57 51.46 173.15 227.40 205.02 44.05 12.08 9.59 62.06 71.57 75.12 54.95 116.51 127.03 78.56 246.40 110.06 175.75 25 E2a_E3a KnownJunction 0 58.23 33.88 224.42 49.08 78.69 86.31 52.82 183.60 273.17 235.07 34.32 21.31 20.94 47.97 65.64 83.65 56.76 129.54 73.70 93.51 286.59 93.93 199.41 26 ER3a ExonRegion 0 75.04 46.24 244.93 55.21 85.27 74.97 48.84 193.28 296.94 262.22 41.37 13.81 12.73 73.18 86.24 111.49 56.31 146.08 122.14 92.20 297.00 92.27 208.61 27 E3a_E4a KnownJunction 0 116.09 58.02 263.09 80.58 99.92 70.47 51.98 213.26 313.54 272.11 58.01 13.95 12.99 78.76 103.71 136.12 43.29 152.88 135.44 70.82 295.23 103.06 266.08 28 ER4a ExonRegion 0 58.07 37.26 209.23 49.26 44.57 46.28 28.91 139.77 240.04 215.24 41.58 18.45 16.27 59.82 82.78 83.03 56.29 101.45 116.66 78.61 223.61 84.64 181.95 29 E4_Da NovelBoundary 0 26.38 2.63 55.56 22.14 28.10 14.54 22.21 70.69 75.11 75.62 7.58 0.00 5.68 16.72 23.73 21.19 22.44 27.03 20.42 14.89 27.86 17.27 42.34 30 E4a_E5a KnownJunction 0 98.02 26.64 210.19 56.77 46.60 44.24 47.83 147.17 218.31 213.36 55.75 21.31 19.80 79.64 87.52 95.10 57.04 130.33 66.83 86.10 294.12 113.28 177.13 31 I4 Intron 0 9.73 5.37 42.13 11.59 15.04 9.21 16.12 38.38 57.98 45.11 7.73 5.46 4.28 11.45 14.70 26.82 17.42 25.74 18.98 9.78 34.51 20.40 47.76 32 I4_AR1 ActiveIntronRegion 0 9.76 5.39 42.27 11.62 15.09 9.24 16.17 38.50 58.18 45.26 7.76 5.48 4.29 11.49 14.75 26.91 17.48 25.82 19.05 9.81 34.62 20.47 47.92 33 E5_Aa NovelBoundary 0 16.67 12.50 104.99 24.27 26.15 18.97 22.21 66.29 108.22 70.51 2.63 7.20 6.82 16.48 25.47 36.83 8.70 43.77 42.35 21.35 47.88 11.27 54.72 34 ER5a ExonRegion 0 72.42 41.00 283.74 64.64 69.80 64.47 39.39 189.36 263.36 231.01 51.94 18.36 14.23 61.26 81.18 104.42 45.86 163.57 92.40 83.79 297.81 110.24 176.08 35 E5a_E6a KnownJunction 0 104.83 47.36 317.46 88.70 71.14 75.81 62.31 244.92 291.03 257.47 52.01 24.76 21.91 64.45 114.59 97.58 60.12 134.47 120.66 62.70 245.44 119.28 215.54 36 ER6a ExonRegion 0 68.47 50.69 287.84 64.82 41.76 88.47 36.48 182.89 252.19 202.81 46.97 14.28 15.52 59.35 84.14 72.63 51.30 113.97 74.31 86.22 262.99 101.72 122.53 37 E6a_E7a KnownJunction 1 65.42 58.94 368.76 73.72 17.91 97.56 26.76 154.81 237.56 216.96 49.07 6.30 0.00 45.09 70.71 100.23 25.90 133.94 65.41 102.08 216.78 86.65 113.11 38 ER7a ExonRegion 0 75.85 51.85 275.57 74.10 48.60 60.98 36.24 164.35 254.65 204.81 45.57 10.83 4.64 61.91 85.27 93.57 58.81 138.83 93.96 61.20 231.16 106.80 140.48 39 E7a_E8a KnownJunction 1 107.87 70.71 292.21 78.91 65.79 85.52 21.90 227.84 356.45 264.91 41.96 0.00 0.00 80.11 104.09 127.06 37.49 169.13 151.44 66.86 207.20 192.89 231.33 40 E8_Aa NovelBoundary 0 3.41 5.92 33.06 8.19 3.57 7.15 8.17 10.27 11.37 14.83 4.95 0.00 0.00 5.36 20.40 8.54 21.13 17.66 3.86 6.01 29.34 9.00 24.41 41 ER8a ExonRegion 0 82.59 66.25 300.00 86.11 72.51 74.65 36.17 209.87 294.55 257.79 50.17 11.34 9.91 76.14 90.44 100.99 74.12 135.90 109.75 60.28 238.53 126.92 183.44 42 E8_Da NovelBoundary 0 42.67 20.98 177.67 33.80 44.31 23.34 9.58 91.27 144.36 144.19 9.16 6.15 12.82 39.97 62.43 22.47 21.32 56.00 38.59 24.22 96.25 42.92 77.42 43 E8a_E9a KnownJunction 0 6.74 18.09 62.77 32.43 7.72 17.77 11.48 62.31 57.18 62.94 17.06 0.00 0.00 13.89 22.25 27.69 17.30 23.75 20.14 17.90 53.62 60.93 41.91 44 E8_Db NovelBoundary 0 0.00 2.57 21.32 7.19 10.87 9.71 0.00 11.67 10.97 22.54 0.00 0.00 0.00 2.47 4.45 20.93 18.33 13.35 8.38 9.65 11.55 9.37 8.62 45 E8b_E9a KnownJunction 0 52.53 46.50 171.55 42.55 70.54 50.65 32.37 134.68 250.23 180.19 31.17 0.00 0.00 36.97 58.72 41.19 27.58 67.49 76.80 50.24 210.97 62.34 74.27 46 ER8b ExonRegion 0 40.35 44.06 169.75 36.62 59.76 35.58 26.83 132.51 215.32 176.47 26.42 3.17 3.13 45.04 61.12 45.97 29.27 55.68 68.80 47.38 179.09 61.26 75.57 47 E9_Aa NovelBoundary 0 27.86 15.52 39.00 3.60 11.71 0.00 19.39 25.71 6.28 26.54 5.11 0.00 0.00 2.35 10.75 0.00 9.54 15.25 16.75 9.40 19.15 12.43 28.00 48 ER9a ExonRegion 1 107.23 73.66 240.16 65.28 99.50 85.53 46.97 173.61 258.31 223.42 41.69 2.11 8.13 55.33 101.91 97.77 64.02 123.71 92.23 65.14 251.48 118.71 131.77 49 E9_Da NovelBoundary 0 6.82 21.51 14.64 1.80 4.33 5.62 2.21 0.00 4.72 3.20 7.69 5.55 0.00 2.47 15.95 3.67 8.42 22.34 16.00 8.44 11.98 10.84 12.38 50 E9a_E10a KnownJunction 0 201.89 85.58 323.50 79.51 112.65 67.63 42.44 175.59 248.90 251.13 31.90 0.00 31.82 74.17 42.15 125.44 61.06 156.20 79.63 55.35 227.28 74.64 171.75 51 I9 Intron 0 9.52 8.54 16.75 4.93 9.02 3.36 9.87 8.54 12.52 9.91 4.80 6.58 6.98 7.64 13.48 10.73 8.20 11.96 11.68 7.80 17.99 8.38 14.25 52 I9_SR1 SilentIntronRegion 0 9.03 10.71 16.09 3.99 12.07 3.34 10.23 9.14 11.79 10.11 5.53 5.59 8.78 7.78 14.23 10.18 7.13 9.87 11.23 8.35 16.46 6.57 13.29 53 E10_Aa NovelBoundary 0 9.48 0.00 22.38 1.86 3.74 2.33 17.58 6.04 7.09 3.22 4.79 0.00 0.00 4.83 15.20 11.71 13.00 5.93 13.93 3.26 28.66 11.33 8.28 54 ER10a ExonRegion 0 74.72 55.60 244.65 55.36 25.47 50.09 30.55 136.44 200.35 173.84 26.35 3.02 14.66 40.53 65.43 74.60 32.07 115.14 56.20 38.53 152.15 65.26 107.29 55 E10_Da NovelBoundary 0 23.12 9.67 5.94 0.00 3.99 4.77 11.61 12.28 8.19 20.93 12.69 6.00 0.00 17.72 13.35 19.05 8.42 37.97 8.09 8.69 28.48 5.76 4.01 56 E10a_E11a KnownJunction 0 101.50 57.88 311.55 85.74 25.47 56.62 46.50 182.62 237.76 221.64 51.96 0.00 20.13 43.73 37.95 50.50 41.98 93.85 59.95 50.62 173.90 80.89 103.20 57 Ix Intron 0 7.88 3.79 5.44 0.76 1.99 1.37 1.97 0.96 2.74 1.27 7.20 1.33 4.62 12.10 17.85 9.96 2.46 3.78 3.56 6.34 10.66 6.98 6.56 58 Ix_SR1 SilentIntronRegion 0 4.94 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.63 4.33 4.84 4.95 0.00 0.00 4.25 12.06 5.14 0.00 5.87 59 Ix_AR1 ActiveIntronRegion 0 7.99 3.90 5.60 0.78 1.99 1.41 2.03 0.99 2.82 1.31 7.41 1.37 4.41 12.36 18.28 10.15 2.53 3.89 3.57 6.25 10.87 7.19 6.62 60 E11_Aa NovelBoundary 0 9.93 2.50 23.03 4.03 7.72 5.45 4.11 14.21 26.22 15.07 6.79 0.00 0.00 15.01 26.95 22.99 12.16 29.97 8.85 6.14 36.76 2.88 11.52 61 ER11a ExonRegion 0 49.07 38.95 202.53 40.65 24.08 41.78 23.72 124.10 181.61 156.33 21.19 2.79 5.64 34.22 49.96 55.04 25.78 104.84 54.64 32.09 123.94 79.67 90.22 62 E11a_E12a KnownJunction 0 155.36 58.34 354.01 88.53 79.88 89.27 64.21 236.01 353.61 289.46 57.96 5.85 21.59 78.52 139.81 141.67 89.39 168.96 102.97 65.13 345.34 138.27 175.76 63 ER12a ExonRegion 0 52.50 40.86 225.09 50.05 37.05 44.31 32.50 160.39 203.98 179.30 23.57 4.77 11.15 31.69 65.66 46.19 43.11 73.85 65.46 35.39 159.21 84.51 85.19 64 E12_Da NovelBoundary 0 17.34 0.00 30.66 0.00 4.33 2.78 0.00 20.70 22.19 18.32 15.42 5.40 0.00 12.60 10.75 19.82 4.02 13.18 0.00 0.00 22.98 9.00 20.06 65 E12a_E13a KnownJunction 0 66.16 53.87 271.19 66.66 47.71 58.15 22.96 216.50 245.11 218.31 36.54 18.01 6.82 21.43 57.48 51.87 63.96 155.91 86.21 42.63 193.55 124.92 91.34 66 E12a_E15a NovelJunction 1 10.00 0.00 27.35 8.32 3.65 2.21 1.85 3.94 18.40 5.67 0.00 0.00 0.00 7.00 38.82 24.10 11.97 2.28 0.00 0.00 75.74 28.41 27.91 67 ER13a ExonRegion 0 63.00 32.23 199.66 39.61 52.66 48.93 22.96 143.09 198.80 167.47 39.81 6.63 4.29 52.63 57.90 71.39 46.49 98.01 103.56 40.97 175.12 109.10 95.28 68 E13_Da NovelBoundary 0 20.52 26.05 65.11 31.13 22.16 16.41 11.35 43.91 46.70 38.60 7.63 12.45 0.00 16.72 45.00 39.73 35.90 65.29 49.04 5.43 42.94 50.76 65.05 69 E13a_E14a KnownJunction 0 42.01 6.31 80.45 13.68 47.45 26.29 7.38 53.36 90.51 63.05 20.53 0.00 6.33 39.79 27.32 45.54 12.44 51.65 50.54 35.54 82.97 49.54 41.83 70 E13a_E14b KnownJunction 0 16.60 19.47 63.84 15.78 7.89 8.06 9.54 31.42 68.69 40.78 4.79 0.00 0.00 21.31 22.50 14.27 12.44 34.32 14.12 8.95 48.74 36.25 20.57 71 E13a_E15a KnownJunction 0 0.00 2.43 6.89 0.00 3.48 0.00 2.16 2.55 1.48 7.04 2.37 0.00 0.00 0.00 4.45 0.00 0.00 8.42 0.00 3.26 3.15 2.51 15.79 72 Ix Intron 0 17.55 4.31 37.38 13.26 18.42 4.53 8.41 32.73 30.54 36.80 18.42 8.85 6.04 11.31 24.24 25.18 22.72 39.55 32.63 12.39 37.33 31.62 34.72 73 Ix_AR1 ActiveIntronRegion 0 17.68 4.34 37.64 13.35 18.54 4.56 8.47 32.96 30.74 37.05 18.55 8.89 6.08 11.39 24.41 25.35 22.88 39.82 32.85 12.48 37.58 31.83 34.95 74 E14a_E14c KnownJunction 0 0.00 0.00 23.62 3.70 0.00 0.00 0.00 11.91 21.47 10.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 75 E14_Ac NovelBoundary 0 27.63 11.45 71.76 8.46 17.66 34.41 16.38 44.52 76.62 59.12 6.63 6.30 6.49 16.25 23.36 22.64 30.20 28.77 21.55 16.49 55.54 28.11 27.49 76 ER14a ExonRegion 0 31.32 10.17 130.13 20.44 32.64 32.27 9.00 84.69 135.12 88.08 20.88 2.60 4.69 36.71 26.11 43.99 14.52 36.22 40.14 29.36 83.30 44.17 41.70 77 ER14b ExonRegion 0 34.92 20.13 172.04 26.30 25.15 31.91 13.77 107.68 166.25 119.62 21.84 4.33 8.91 52.78 41.49 44.88 34.00 51.92 50.33 37.23 102.91 62.71 50.22 78 ER14c ExonRegion 0 29.63 18.30 146.55 19.90 16.05 31.17 10.59 98.87 153.15 115.15 9.66 8.66 10.32 47.10 29.01 37.45 29.71 34.74 50.33 30.64 96.96 46.67 44.64 79 ER14d ExonRegion 0 20.57 13.41 145.32 22.83 9.78 25.50 9.89 101.22 163.42 123.47 7.25 10.82 9.97 36.64 47.78 29.26 36.21 32.68 46.88 28.79 98.62 35.75 39.92 80 E14_Db KnownBoundary 0 9.71 5.92 82.14 13.75 4.16 13.23 1.90 68.76 70.60 61.46 2.32 0.00 6.49 7.24 9.27 7.52 9.54 9.70 28.71 5.75 44.79 23.51 12.46 81 E14b_E14d KnownJunction 0 0.00 0.00 62.21 7.89 0.00 0.00 0.00 58.53 77.83 56.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.95 0.00 0.00 0.00 0.00 0.00 82 E14_Ad KnownBoundary 0 12.82 13.42 80.25 14.52 0.00 5.11 8.97 58.04 94.56 56.95 4.95 0.00 6.82 17.07 26.95 23.41 16.18 28.23 25.51 19.37 50.35 24.62 29.79 83 ER14e ExonRegion 0 17.28 15.25 177.47 29.07 5.35 24.45 8.39 112.64 169.21 125.39 4.51 4.33 4.69 36.54 73.01 27.24 38.51 29.26 62.11 39.01 114.23 40.98 44.54 84 ER14f ExonRegion 0 24.01 20.53 164.05 25.17 8.61 22.92 7.61 116.40 175.89 127.27 17.21 1.49 2.49 40.65 63.65 39.47 46.83 40.13 76.25 48.27 123.55 54.04 72.50 85 E14_Dc NovelBoundary 0 46.67 2.83 9.58 5.56 11.97 0.00 2.25 11.17 6.08 10.96 2.53 6.30 0.00 6.89 12.49 4.27 3.83 20.77 13.65 3.26 22.86 5.69 7.60 86 E14c_E15a KnownJunction 0 66.53 36.84 201.74 30.73 20.29 33.50 12.23 141.79 209.60 131.06 33.69 6.75 6.82 35.49 67.25 64.60 67.23 84.19 119.91 61.42 139.93 77.40 103.63 87 E15_Aa NovelBoundary 0 9.85 3.22 20.61 5.29 6.71 0.00 1.81 14.42 13.14 15.79 7.05 6.30 6.82 7.42 8.90 11.28 0.00 21.47 16.66 18.34 25.82 5.27 20.40 88 ER15a ExonRegion 0 58.38 37.56 116.88 26.61 23.86 38.75 19.20 85.50 128.61 117.44 29.14 6.32 9.06 59.28 69.00 57.54 45.64 78.31 62.80 33.95 171.83 66.75 108.92 89 E15_Da KnownBoundary 0 39.41 12.89 27.73 6.89 18.51 4.94 5.56 18.11 16.46 21.79 26.95 18.91 6.66 25.25 22.62 27.77 20.01 14.01 16.00 21.73 51.77 32.51 51.05 90 E15a_E15b KnownJunction 0 41.93 106.89 32.55 32.90 35.31 29.24 28.18 28.22 116.35 105.94 31.69 11.25 5.68 46.62 49.82 35.55 28.24 83.53 51.95 38.93 193.73 30.07 97.23 91 ER15b ExonRegion 0 12.14 4.61 11.83 2.06 12.89 3.18 3.51 10.23 15.40 9.90 9.15 6.18 1.24 9.41 8.53 9.16 8.15 9.43 9.17 8.81 19.97 8.16 13.90 92 E15_Ab KnownBoundary 0 26.15 29.14 22.35 16.88 35.40 24.19 10.95 16.63 58.16 43.11 11.63 12.00 0.00 35.61 23.49 26.06 17.39 44.23 26.92 26.59 60.67 14.08 25.78 93 ER15c ExonRegion 0 107.80 108.14 262.65 76.19 80.55 75.01 44.79 210.99 279.38 229.90 54.01 47.33 28.48 84.50 94.18 120.16 66.66 149.79 122.42 58.57 264.50 147.55 199.97