Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLC3 Gene 0 4.12 3.83 3.92 3.99 3.53 2.38 4.00 4.28 4.48 4.67 3.37 3.56 3.84 4.23 6.78 6.09 5.28 5.17 4.91 5.17 4.07 2.11 5.78 2 494686 Transcript 0 7.23 5.89 5.34 7.11 5.21 4.84 7.04 8.68 8.27 9.38 3.85 5.28 7.03 2.76 5.55 10.03 7.42 8.81 4.96 6.16 6.01 2.79 8.77 3 391946 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 470402 Transcript 0 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 1.09 0.00 0.00 5 337446 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1a_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 0.00 0.00 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.06 1.09 0.00 0.00 10 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 0.00 0.00 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.06 0.00 0.00 12 E2_Ac KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 0.00 0.00 13 ER2c ExonRegion 0 0.41 0.00 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.20 0.61 0.52 0.00 0.80 0.00 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 0 0.47 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.43 0.34 0.00 0.00 0.45 0.00 0.00 0.99 0.00 0.00 0.95 0.92 0.65 16 E3_Da KnownBoundary 0 0.00 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 17 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3b ExonRegion 0 14.45 11.78 10.68 14.21 10.42 9.68 14.08 17.36 16.55 18.76 7.69 10.57 14.06 5.52 11.09 20.05 14.84 17.63 9.92 12.33 12.02 5.58 17.53 19 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.58 1.48 0.00 0.00 0.00 2.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 0.00 1.19 1.42 0.83 0.00 0.27 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.00 22 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.70 2.07 0.00 0.00 1.19 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER7a ExonRegion 0 2.12 0.00 0.90 1.02 0.00 0.00 0.00 0.00 0.23 0.80 1.93 1.78 0.00 0.00 2.05 1.49 0.00 0.00 0.00 0.00 0.00 0.00 1.15 26 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER8a ExonRegion 0 0.62 1.19 0.60 0.04 0.00 1.07 0.42 0.82 1.24 0.53 0.02 0.00 0.00 0.42 0.78 0.00 0.99 2.06 1.92 1.27 0.75 0.04 1.05 28 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 3.59 29 I8_AR1 ActiveIntronRegion 0 12.18 9.57 14.87 9.58 9.10 1.92 4.16 7.41 10.18 3.12 32.34 10.26 9.52 37.89 58.40 14.77 18.21 8.89 32.49 34.63 17.28 7.63 13.07 30 E9_Aa NovelBoundary 0 24.75 32.89 100.97 37.56 20.29 5.79 8.52 31.01 24.25 25.20 49.49 0.00 0.00 53.98 60.82 49.22 24.59 56.29 30.78 29.59 17.92 8.63 23.22 31 ER9a ExonRegion 0 6.91 11.29 15.01 8.99 16.17 0.00 9.38 2.75 8.66 0.00 15.04 5.76 0.00 45.78 57.67 16.66 18.46 3.63 33.81 23.80 14.65 7.88 16.43 32 E9_Da NovelBoundary 0 22.15 5.99 71.73 31.56 40.75 5.56 11.39 29.20 19.99 26.57 66.33 6.30 0.00 50.39 92.84 27.26 48.06 26.99 93.74 67.05 27.68 21.92 18.78 33 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 I9 Intron 0 2.63 10.12 6.81 0.00 18.31 0.00 4.12 0.00 0.00 5.31 15.63 8.87 0.00 35.18 46.38 16.64 10.26 8.00 21.79 13.23 2.74 3.89 16.44 35 I9_AR1 ActiveIntronRegion 0 2.70 10.37 6.98 0.00 18.76 0.00 4.22 0.00 0.00 5.45 15.97 9.09 0.00 36.06 47.47 17.05 10.52 8.15 22.30 13.54 2.81 3.98 16.81 36 E10_Aa NovelBoundary 0 21.93 33.55 84.44 16.68 27.67 5.34 4.37 22.63 19.70 12.09 17.06 0.00 6.82 46.97 64.53 27.34 17.77 41.91 21.65 42.63 26.32 0.00 31.76 37 ER10a ExonRegion 0 0.39 0.43 0.87 0.22 0.77 0.00 0.94 0.00 0.39 0.00 0.20 0.57 0.00 6.75 8.32 0.31 0.43 0.68 0.00 0.00 0.41 2.14 0.08 38 E10_Da NovelBoundary 0 17.63 15.92 62.80 14.65 15.20 5.17 16.21 18.85 7.64 6.80 28.74 0.00 6.33 52.21 66.14 19.57 22.35 35.53 24.38 35.28 23.48 16.78 30.82 39 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 40 I10 Intron 0 4.85 3.50 4.19 3.49 4.60 1.05 1.52 1.48 2.11 5.88 8.86 0.00 0.00 38.38 40.10 10.22 9.46 1.06 25.55 19.51 8.81 4.78 15.15 41 I10_AR1 ActiveIntronRegion 0 4.94 3.58 4.25 3.57 4.71 1.07 1.55 1.51 2.16 5.99 9.04 0.00 0.00 39.26 41.02 10.45 9.68 1.08 26.14 19.96 9.02 4.89 15.49 42 E11_Aa NovelBoundary 0 21.26 21.77 45.12 11.45 12.82 0.00 4.33 14.66 16.23 10.21 41.01 0.00 0.00 26.37 30.90 6.92 21.60 31.55 4.80 49.66 25.33 6.00 3.84 43 ER11a ExonRegion 0 3.36 8.76 12.93 5.77 10.20 0.87 6.82 1.23 3.42 0.81 11.09 0.12 1.84 16.86 32.32 11.22 18.73 11.69 24.29 13.26 9.35 4.44 15.42 44 E11_Da NovelBoundary 0 59.71 19.73 87.61 13.15 31.07 2.27 16.12 22.30 17.51 21.54 29.69 0.00 6.66 45.15 60.57 37.43 16.64 62.55 131.20 56.06 17.67 15.61 33.29 45 E11a_E12a KnownJunction 0 3.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 46 I11 Intron 0 7.59 11.76 15.10 3.36 5.90 1.01 1.82 2.84 8.63 4.24 19.72 8.00 5.32 24.88 37.73 7.37 16.38 10.88 22.83 19.36 8.49 3.46 8.91 47 I11_AR1 ActiveIntronRegion 0 7.66 11.89 15.27 3.40 5.97 1.01 1.84 2.87 8.72 4.29 19.91 8.09 5.38 25.15 38.13 7.45 16.54 10.99 23.05 19.54 8.59 3.50 9.00 48 E12_Aa NovelBoundary 0 13.78 11.31 63.33 18.48 39.73 0.00 9.72 10.88 19.01 10.02 38.43 11.85 27.27 46.27 72.07 14.78 39.93 34.78 20.42 30.81 24.53 8.21 28.77 49 ER12a ExonRegion 0 4.50 6.32 0.02 0.00 2.13 0.00 0.99 0.00 0.00 0.38 7.64 22.26 18.47 15.63 14.69 2.37 10.42 3.29 5.08 25.20 5.16 4.07 9.27 50 E12_Da NovelBoundary 0 14.37 15.79 84.15 32.56 31.32 0.00 4.06 9.82 22.14 14.32 21.95 6.30 0.00 40.20 57.61 27.69 28.99 51.03 31.25 38.22 28.17 8.33 33.38 51 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.82 0.00 0.00 0.00 3.12 0.00 52 E13_Aa NovelBoundary 0 23.49 28.28 120.87 29.47 0.00 5.51 1.85 42.22 32.78 31.13 62.59 17.26 18.51 94.00 143.64 55.80 44.60 83.57 99.67 66.35 30.58 20.45 23.99 53 ER13a ExonRegion 0 0.00 0.46 0.00 0.46 0.00 0.00 0.00 0.00 0.41 0.66 0.00 0.08 0.00 0.08 0.03 0.67 0.03 0.72 0.00 0.03 0.00 0.24 0.01 54 ER13b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00