Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LIPE Gene 0 19.48 11.72 37.86 19.78 7.34 21.39 9.44 25.11 12.24 30.43 36.07 4.85 9.16 36.09 43.63 37.05 33.87 44.93 27.01 27.35 13.85 4.60 6.60 2 244289 Transcript 0 26.94 17.89 56.21 25.68 9.73 31.34 13.28 36.83 15.84 43.41 57.40 5.87 14.24 53.21 58.34 55.10 49.94 68.36 37.61 37.91 17.23 6.04 7.85 3 ER1a ExonRegion 0 0.84 2.07 2.35 4.56 2.47 6.65 2.68 4.78 3.73 5.75 0.61 0.91 0.55 0.32 1.77 2.63 1.18 4.54 5.33 7.40 3.70 1.10 1.42 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 5.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.72 0.00 0.00 5 I1_AR3 ActiveIntronRegion 0 11.87 13.06 14.63 15.28 5.84 10.11 7.86 7.23 9.69 22.03 0.76 4.72 8.39 5.41 9.58 19.18 6.10 23.29 3.96 18.05 1.14 0.00 3.11 6 I1_SR3 SilentIntronRegion 0 16.92 8.37 20.85 10.76 8.29 5.34 7.74 13.07 7.14 19.25 5.11 3.24 4.73 3.64 10.93 12.80 7.35 22.88 12.55 19.62 6.01 1.85 5.08 7 E2_Aa NovelBoundary 0 7.56 3.35 21.67 8.42 16.81 5.62 4.33 13.76 8.30 20.68 0.00 0.00 0.00 4.77 13.35 6.32 0.00 21.10 4.80 18.73 9.39 2.45 0.00 8 ER2a ExonRegion 0 24.46 13.92 47.11 16.79 8.40 22.33 13.15 26.09 16.38 45.54 47.17 4.09 10.46 50.97 64.42 48.93 44.30 54.42 36.08 35.88 16.38 5.69 11.63 9 E2_Da NovelBoundary 0 10.08 15.39 8.54 3.50 8.57 5.28 8.08 4.27 6.51 17.97 0.00 6.30 6.33 0.00 9.02 3.42 4.11 22.76 8.85 14.64 0.00 0.00 4.01 10 E2a_E3a KnownJunction 0 16.52 9.93 52.22 21.74 7.05 19.99 8.61 37.91 11.89 42.28 77.34 0.00 6.66 44.74 52.41 58.62 29.45 86.47 46.40 26.59 15.26 8.14 6.91 11 I2 Intron 0 9.29 4.93 10.02 6.50 8.69 4.19 6.78 8.01 5.98 8.99 3.01 3.47 4.43 3.92 10.63 11.69 6.19 11.31 12.97 14.11 4.44 1.72 6.72 12 I2_SR1 SilentIntronRegion 0 9.86 4.50 8.64 6.82 7.97 5.18 6.77 6.69 5.20 10.31 2.80 2.68 2.02 3.32 8.05 10.89 4.03 11.08 14.35 14.13 4.38 1.91 7.85 13 I2_AR1 ActiveIntronRegion 0 9.82 6.57 13.35 6.53 10.99 3.24 7.70 11.33 7.54 7.26 3.12 6.01 7.40 3.60 11.82 12.16 9.15 11.61 10.78 13.61 3.48 1.80 5.19 14 I2_AR2 ActiveIntronRegion 0 3.64 2.33 8.37 4.66 6.13 1.05 3.79 5.88 6.33 6.86 4.43 0.00 11.54 10.02 26.47 17.00 11.35 13.16 12.78 17.07 8.84 0.00 5.05 15 E3_Aa NovelBoundary 0 12.52 15.79 21.50 27.80 7.39 6.98 11.48 12.40 21.47 16.76 9.16 0.00 6.82 7.18 8.90 22.73 21.60 16.50 11.95 30.23 26.75 3.12 0.00 16 ER3a ExonRegion 0 29.72 20.92 65.27 26.82 14.23 25.96 16.73 45.17 22.57 53.94 75.77 8.14 27.11 80.24 83.15 63.04 71.71 117.61 45.44 45.12 24.07 8.47 6.81 17 E3_Da NovelBoundary 0 11.11 6.05 17.86 11.52 0.00 0.00 4.50 13.14 9.32 24.87 7.74 0.00 0.00 4.77 4.45 4.36 17.39 23.38 13.46 23.52 8.34 0.00 3.41 18 E3a_E4a KnownJunction 0 30.89 21.71 76.40 19.68 7.30 28.51 16.56 61.20 26.48 79.19 96.60 5.85 25.32 81.52 80.97 105.96 96.77 131.57 64.66 59.38 9.45 8.33 20.49 19 I3 Intron 1 9.81 1.89 0.85 2.82 1.24 3.40 2.46 4.78 3.41 4.75 0.90 0.00 5.37 1.37 12.74 6.89 4.59 6.82 4.43 12.82 5.11 0.00 0.00 20 I3_AR1 ActiveIntronRegion 1 9.96 1.90 0.86 2.86 1.26 3.46 2.50 4.85 3.48 4.84 0.91 0.00 5.43 1.40 12.98 7.02 4.62 6.95 4.51 13.04 5.20 0.00 0.00 21 E4_Aa NovelBoundary 0 6.74 5.00 21.26 11.89 4.33 10.45 2.21 5.63 5.99 13.32 7.00 0.00 6.49 2.18 8.90 8.29 0.00 5.93 14.31 17.90 0.00 3.00 3.24 22 ER4a ExonRegion 0 26.95 17.06 80.10 37.04 7.02 45.49 17.89 54.97 29.15 61.52 82.17 8.81 32.41 95.68 89.88 91.30 84.83 115.90 64.19 60.23 33.86 8.55 8.39 23 E4_Da NovelBoundary 0 3.48 5.79 11.92 12.62 12.31 2.90 4.24 15.53 5.64 9.40 2.68 0.00 12.66 4.71 4.45 4.36 4.77 19.61 12.42 30.55 0.00 3.12 11.35 24 E4a_E5a KnownJunction 0 23.34 15.13 87.11 41.89 4.24 40.72 14.88 43.87 16.44 57.54 61.86 5.70 26.78 63.87 44.75 52.46 84.34 90.53 30.59 52.99 26.81 11.88 0.00 25 E4a_E6a NovelJunction 0 0.00 6.71 1.66 0.00 0.00 0.00 0.00 2.51 0.00 4.22 0.00 0.00 0.00 0.00 4.45 0.00 13.56 0.00 0.00 0.00 3.15 0.00 0.00 26 I4_AR1 ActiveIntronRegion 0 2.12 0.68 7.30 6.77 0.00 0.61 1.32 5.15 3.07 5.70 1.29 1.19 0.00 0.00 8.87 12.88 7.70 7.34 6.37 8.51 2.94 2.78 2.94 27 E5_Aa NovelBoundary 0 7.11 6.31 26.05 3.80 0.00 0.00 0.00 11.09 8.25 10.99 0.00 0.00 0.00 0.00 4.45 14.78 3.83 21.93 17.51 22.56 13.78 2.63 0.00 28 ER5a ExonRegion 0 27.36 10.93 77.56 33.65 6.60 33.13 15.65 40.93 19.10 56.22 72.51 12.50 25.27 75.72 89.58 70.64 73.01 81.25 57.32 51.21 24.95 10.41 12.11 29 E5_Da NovelBoundary 0 0.00 3.22 23.06 1.83 0.00 0.00 5.92 7.48 3.04 5.29 0.00 0.00 0.00 9.06 9.77 4.36 4.77 15.71 9.51 21.41 2.35 0.00 0.00 30 E5a_E6a KnownJunction 0 26.23 31.77 74.57 31.60 4.16 24.93 10.64 35.53 16.87 56.41 83.34 0.00 12.66 80.11 61.07 45.54 61.62 79.05 56.47 43.46 17.30 13.59 7.26 31 E6_Aa NovelBoundary 0 0.00 0.00 14.58 6.19 0.00 0.00 2.03 13.68 1.24 7.74 0.00 0.00 0.00 6.71 18.67 6.92 7.76 6.55 4.05 7.93 0.00 0.00 3.50 32 ER6a ExonRegion 0 23.99 16.05 62.83 30.39 6.40 33.11 11.18 37.26 16.51 49.30 63.70 11.39 14.48 52.52 60.97 50.91 66.53 72.60 40.71 37.34 17.64 8.82 12.19 33 E6_Da NovelBoundary 0 3.48 3.22 13.31 9.09 0.00 2.38 6.58 3.61 3.91 14.02 2.26 6.30 0.00 2.35 21.63 11.19 8.70 18.20 8.66 12.53 4.88 2.45 7.60 34 E6a_E7a KnownJunction 0 23.93 16.18 63.75 29.10 3.31 65.81 10.64 38.53 19.21 29.74 41.22 12.45 19.64 33.73 30.29 65.62 38.15 85.64 9.04 36.24 10.44 3.12 0.00 35 E6a_E8a NovelJunction 0 10.52 2.96 15.05 4.93 0.00 7.78 10.42 10.02 0.00 8.62 7.69 6.30 0.00 17.01 19.53 16.15 17.20 5.84 0.00 0.00 0.00 3.00 0.00 36 I6 Intron 0 9.21 2.11 9.49 6.73 6.43 5.72 3.78 6.19 5.02 9.33 3.39 0.69 2.42 2.82 7.57 9.65 8.79 18.86 9.31 14.24 2.86 0.68 5.53 37 I6_SR1 SilentIntronRegion 0 9.24 2.12 9.52 6.75 6.45 5.74 3.79 6.21 5.04 9.35 3.40 0.70 2.43 2.83 7.59 9.68 8.82 18.90 9.34 14.27 2.87 0.68 5.55 38 E7_Aa NovelBoundary 0 13.34 0.00 8.25 14.62 28.01 31.63 2.12 9.28 10.33 3.33 0.00 0.00 0.00 0.00 8.90 3.67 4.77 14.30 3.48 11.51 2.97 0.00 0.00 39 ER7a ExonRegion 0 30.41 12.47 46.14 18.60 9.39 35.03 8.73 33.34 11.58 31.49 39.73 4.10 7.73 36.06 43.81 41.15 37.86 38.88 27.42 36.33 15.74 3.50 4.89 40 E7_Da NovelBoundary 0 17.63 11.71 16.06 17.18 7.39 2.44 8.21 7.72 2.75 6.50 2.16 0.00 0.00 2.41 8.78 7.18 4.77 20.69 4.80 15.60 8.83 0.00 0.00 41 E7a_E8a KnownJunction 0 48.08 33.22 45.95 25.30 23.26 62.18 31.40 43.05 19.30 45.42 56.07 6.15 6.49 50.44 59.95 34.86 44.13 49.70 8.94 49.86 5.13 0.00 11.44 42 E8_Aa NovelBoundary 0 27.49 11.45 24.33 16.58 14.77 17.83 14.22 16.14 10.30 25.87 4.84 10.65 0.00 0.00 5.32 18.54 8.13 28.02 16.66 11.12 3.03 2.88 4.18 43 ER8a ExonRegion 0 58.26 36.57 64.58 32.13 15.06 48.29 21.36 53.24 19.37 53.96 70.05 8.63 18.04 66.10 82.23 73.97 53.84 77.61 38.80 43.83 17.63 5.69 11.23 44 E8_Da NovelBoundary 0 27.49 18.62 15.43 27.50 3.90 5.05 8.30 15.94 4.02 8.49 0.00 0.00 6.82 12.01 18.91 26.66 3.55 29.56 0.00 29.66 0.00 0.00 3.93 45 E8a_E9a KnownJunction 0 42.67 37.82 78.15 35.63 35.14 48.38 20.84 47.97 16.09 73.04 89.71 6.00 20.78 86.70 103.84 95.19 63.02 59.82 63.81 44.74 31.88 3.12 15.71 46 I8 Intron 0 11.31 9.41 6.12 6.32 10.67 5.42 6.55 5.14 4.85 7.09 2.47 3.98 6.77 3.90 9.12 10.92 7.38 10.92 8.14 14.94 2.11 1.50 4.69 47 I8_SR1 SilentIntronRegion 0 11.77 9.72 6.36 6.45 11.00 5.58 6.73 5.32 4.94 7.36 2.50 4.15 6.83 4.06 9.37 11.08 7.61 11.26 8.38 15.41 2.13 1.56 4.88 48 E9_Aa NovelBoundary 0 7.48 2.63 34.56 19.11 11.88 9.71 17.14 8.58 9.11 10.10 4.32 0.00 19.64 9.30 4.45 21.28 11.59 17.70 9.51 37.71 3.03 0.00 7.17 49 ER9a ExonRegion 0 45.58 27.77 89.52 57.95 22.00 41.33 18.78 59.21 25.48 60.11 72.34 9.03 11.72 76.51 93.73 89.46 65.54 105.71 48.62 51.98 29.04 10.38 11.84 50 E9_Da NovelBoundary 0 7.11 5.79 7.66 11.75 3.23 5.39 0.00 15.12 5.47 20.60 4.79 0.00 6.82 9.48 19.41 3.33 20.20 4.68 0.00 12.27 5.81 2.82 0.00 51 E9a_E10a KnownJunction 0 24.23 11.97 44.26 18.98 7.13 2.90 9.54 30.89 7.38 16.68 46.17 5.70 0.00 24.13 47.96 49.05 22.16 38.47 57.51 29.08 18.84 3.12 4.35 52 I9 Intron 0 7.02 5.95 11.40 6.34 8.35 6.44 4.91 10.05 3.77 10.17 4.90 3.35 2.80 7.53 10.80 13.91 9.98 13.26 8.08 11.62 3.87 1.22 4.01 53 I9_SR1 SilentIntronRegion 0 7.04 5.97 11.44 6.36 8.38 6.46 4.92 10.09 3.78 10.21 4.92 3.37 2.81 7.56 10.84 13.96 10.02 13.31 8.11 11.66 3.88 1.22 4.02 54 E10_Aa NovelBoundary 0 3.56 2.43 15.88 6.89 0.00 2.16 0.00 7.76 0.00 8.84 8.05 11.55 0.00 4.83 8.90 15.81 4.77 25.12 4.33 9.40 3.09 0.00 8.02 55 ER10a ExonRegion 0 8.37 4.49 10.14 6.13 1.78 5.00 3.06 5.81 3.37 6.63 14.34 2.16 4.52 11.65 17.66 7.52 10.33 9.12 13.20 8.59 6.51 0.75 2.54 56 IG41_SR2 SilentIntergenicRegion 0 22.04 9.86 29.74 16.64 13.57 6.30 8.46 19.28 12.44 16.67 4.76 12.31 8.57 5.75 16.48 19.78 10.31 25.85 16.08 22.89 6.66 2.54 8.52 57 IG41_AR1 ActiveIntergenicRegion 0 6.74 4.57 19.24 7.94 17.51 10.36 10.99 12.19 6.74 7.08 5.40 3.52 1.09 4.68 15.68 10.56 6.78 13.77 11.50 11.21 3.64 1.73 6.40