Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRAPPC6A Gene 0 43.91 18.94 101.22 38.87 24.06 22.97 8.08 26.80 24.95 9.00 83.81 15.55 19.24 106.39 203.48 141.66 89.90 40.48 109.05 41.82 31.42 17.00 26.97 2 6275 Transcript 0 42.37 21.26 114.87 45.80 26.66 27.29 9.55 30.37 26.52 8.76 93.24 17.08 17.58 112.97 225.80 141.10 100.99 45.86 130.10 42.34 36.83 18.58 29.01 3 ER1a ExonRegion 0 125.34 43.79 88.03 37.64 45.35 54.04 20.51 18.01 23.17 9.21 92.25 11.74 10.21 58.87 147.38 226.48 83.28 52.94 163.75 33.49 35.06 21.25 32.30 4 E1a_E2a KnownJunction 0 3.19 0.00 24.75 6.06 3.23 0.00 0.00 8.34 3.27 1.37 19.06 11.40 5.84 14.01 8.90 23.67 31.79 2.45 9.22 3.26 8.96 2.76 0.00 5 I1 Intron 0 10.60 3.33 7.59 5.19 5.00 2.71 1.92 4.35 4.26 1.61 2.15 3.08 4.67 5.52 12.48 11.02 7.22 5.73 12.95 8.46 3.39 1.04 4.35 6 I1_AR2 ActiveIntronRegion 0 14.63 4.87 14.79 8.55 2.38 3.51 2.12 6.99 5.95 2.79 2.25 6.57 6.64 7.32 19.01 17.21 11.16 10.68 15.83 8.67 4.41 0.93 1.04 7 I1_SR2 SilentIntronRegion 0 14.49 3.67 13.97 9.79 4.55 2.39 0.66 4.89 7.21 1.93 0.98 0.80 3.59 7.96 12.20 7.36 6.11 6.53 11.47 6.53 4.53 1.41 2.51 8 I1_SR3 SilentIntronRegion 0 10.61 3.22 7.57 4.51 4.92 3.06 1.74 5.52 3.51 1.09 1.29 2.76 5.54 4.47 11.63 9.43 6.33 7.56 12.95 8.63 2.87 0.70 3.48 9 I1_AR5 ActiveIntronRegion 0 12.65 1.42 3.61 4.64 6.30 2.96 1.54 5.18 5.87 3.47 2.50 2.85 4.37 5.64 7.68 14.62 8.85 3.68 11.87 4.64 3.99 1.84 6.92 10 I1_SR4 SilentIntronRegion 0 13.24 4.05 7.17 6.65 5.04 3.51 2.10 4.94 1.87 2.35 2.44 6.03 3.76 4.35 15.32 9.97 6.93 7.42 16.90 13.69 3.69 1.55 4.64 11 E2_Aa NovelBoundary 0 13.56 0.00 6.15 5.13 15.03 0.00 0.00 5.87 2.95 1.58 0.00 0.00 8.28 3.00 4.45 11.11 0.00 21.35 18.26 15.85 5.13 0.00 0.00 12 ER2a ExonRegion 1 3.74 1.67 71.32 27.06 0.28 1.35 0.00 21.50 7.99 4.08 104.89 7.32 11.66 62.36 120.83 41.83 108.06 17.85 72.79 23.53 29.62 8.21 17.40 13 E2a_E3a KnownJunction 1 10.52 0.00 138.17 51.21 0.00 0.00 0.00 28.96 20.37 9.62 141.88 13.65 6.33 100.77 317.70 115.95 139.41 38.47 191.44 31.58 52.94 21.98 30.73 14 ER3a ExonRegion 0 18.08 6.48 157.07 69.76 20.50 4.80 0.55 35.57 33.79 14.44 118.96 21.35 24.05 148.46 339.32 295.17 123.59 73.25 203.22 61.79 46.97 24.05 58.91 15 E3a_E4a KnownJunction 0 12.22 3.35 177.46 88.40 63.50 25.72 9.67 49.54 47.16 9.29 86.55 12.60 12.50 141.50 314.48 273.09 110.33 91.53 273.23 72.55 34.16 40.23 59.07 16 I3 Intron 0 13.02 2.40 13.08 5.82 5.19 2.32 0.45 6.73 4.50 1.01 6.84 2.40 6.00 8.33 15.65 10.52 10.30 5.04 12.35 2.87 3.72 1.76 4.70 17 I3_AR1 ActiveIntronRegion 0 10.90 0.21 3.60 2.37 7.52 0.74 1.06 2.49 1.95 0.69 1.72 0.24 1.55 5.47 10.26 2.67 3.48 0.80 2.41 2.61 3.04 0.84 1.87 18 I3_SR1 SilentIntronRegion 0 16.52 6.16 10.82 1.78 0.53 2.17 0.58 5.37 5.00 1.15 4.98 2.30 2.91 9.92 15.56 13.55 9.30 3.92 6.61 4.06 2.10 2.15 4.58 19 I3_AR2 ActiveIntronRegion 0 13.18 2.48 16.45 7.57 5.24 2.84 0.24 8.30 5.23 1.09 8.76 3.10 7.90 9.00 17.41 12.52 12.62 6.55 16.42 2.77 4.20 1.99 5.62 20 ER4a ExonRegion 0 27.36 24.31 152.12 54.71 70.27 63.20 19.92 44.10 35.69 10.83 107.48 27.27 22.61 165.10 287.95 163.11 107.51 57.74 152.94 54.20 40.90 21.33 28.56 21 E4_Da NovelBoundary 0 3.70 0.00 4.41 1.43 0.00 0.00 0.00 6.24 0.00 1.45 0.00 0.00 0.00 4.83 4.45 8.46 4.68 5.93 13.74 3.26 3.15 5.82 12.38 22 E4a_E5a KnownJunction 0 56.60 69.72 158.42 54.97 43.97 91.14 34.09 45.76 31.48 15.37 114.34 36.76 32.95 182.41 323.26 144.41 137.82 65.04 132.62 49.15 58.81 19.29 36.79 23 ER5a ExonRegion 0 54.40 31.74 114.17 41.38 16.31 27.47 12.00 36.65 35.11 10.32 100.08 21.51 19.41 142.91 247.81 87.55 108.02 33.02 66.79 56.86 31.67 19.44 18.24 24 E5_Da NovelBoundary 0 8.89 2.96 9.85 7.13 4.33 6.81 0.00 2.55 2.84 0.00 4.63 0.00 19.97 6.83 9.64 7.86 15.90 0.00 9.32 2.94 3.15 2.82 0.00 25 E5a_E6a KnownJunction 0 126.99 41.83 108.90 48.08 19.35 24.36 5.65 25.14 33.88 4.92 91.02 12.60 25.65 133.15 220.53 105.27 96.59 47.88 109.37 45.83 44.85 13.66 20.83 26 E6_Aa NovelBoundary 0 22.89 6.12 7.60 12.09 8.40 0.00 3.80 9.86 2.75 1.10 2.68 0.00 0.00 2.35 20.52 3.59 4.39 2.57 17.60 2.81 2.47 0.00 0.00 27 ER6a ExonRegion 0 27.61 10.93 73.19 24.50 10.54 8.11 2.64 20.48 19.83 6.92 49.11 11.64 22.19 93.11 155.67 75.58 64.47 24.33 55.68 33.54 21.17 12.24 16.30