Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC006504.1 Gene 0 12.38 34.45 9.91 20.51 22.04 18.89 30.44 25.57 22.48 23.43 21.74 20.27 27.58 9.23 13.17 11.68 12.07 25.10 19.02 33.14 10.58 9.23 9.72 2 500569 Transcript 0 8.19 22.58 11.85 14.38 19.79 25.41 31.56 19.57 24.03 20.50 28.96 12.85 14.41 8.32 11.71 13.11 12.48 39.50 18.91 37.29 16.92 10.16 8.52 3 ER1a ExonRegion 0 6.23 12.02 6.17 7.22 8.68 14.42 14.91 6.55 11.34 15.42 15.43 4.33 0.68 5.94 7.60 8.89 8.21 33.22 12.27 28.74 11.90 6.72 6.99 4 E1_Da NovelBoundary 0 34.82 29.21 11.74 24.47 15.62 65.36 66.11 26.78 44.65 26.11 56.33 6.30 25.81 4.77 0.00 46.14 33.38 43.73 43.01 44.74 23.78 27.25 25.27 5 E1a_E2a KnownJunction 0 7.19 6.31 12.27 5.36 20.29 26.41 48.23 9.41 21.18 22.48 32.43 12.30 12.99 4.71 8.90 12.05 8.42 33.91 14.12 33.68 24.65 12.37 0.00 6 I1 Intron 0 10.75 15.10 10.35 5.16 9.93 25.80 19.15 5.54 7.91 8.68 7.93 2.24 3.94 3.14 2.17 6.39 1.94 33.01 11.20 18.71 10.33 3.26 5.74 7 I1_AR1 ActiveIntronRegion 0 10.84 15.22 10.43 5.20 10.01 26.00 19.30 5.58 7.97 8.75 7.99 2.26 3.97 3.16 2.18 6.44 1.95 33.27 11.29 18.85 10.41 3.28 5.77 8 E2_Aa NovelBoundary 0 3.56 19.14 22.44 12.39 17.15 2.38 8.66 9.20 23.44 14.02 22.22 0.00 13.80 10.30 8.78 28.71 13.28 21.76 18.92 36.24 29.78 5.02 4.35 9 ER2a ExonRegion 0 13.58 45.59 31.70 30.25 44.05 72.31 53.68 31.14 45.91 35.87 50.26 15.26 14.47 20.36 19.54 30.96 31.59 97.97 42.98 88.33 43.25 24.25 28.18 10 E2_Da NovelBoundary 0 0.00 25.13 2.96 17.65 20.29 5.51 39.57 28.22 10.68 22.81 11.79 6.30 13.15 4.89 5.93 4.36 16.08 19.81 3.67 35.35 0.00 2.45 13.06 11 E2a_E3a KnownJunction 0 0.00 9.87 1.74 6.33 3.65 2.56 9.89 20.58 19.88 5.05 27.85 6.60 6.33 2.24 8.78 4.36 4.21 21.72 8.19 10.42 0.00 0.00 0.00 12 E3_Aa NovelBoundary 0 0.00 0.00 0.00 9.62 0.00 2.61 11.00 16.02 5.30 3.49 9.58 24.91 19.48 2.12 4.45 0.00 0.00 2.57 4.80 20.52 0.00 0.00 3.59 13 ER3a ExonRegion 0 13.96 39.13 7.38 22.76 22.27 11.35 31.10 30.17 21.84 23.69 18.85 25.74 37.56 8.35 13.73 9.30 9.96 10.68 17.01 25.28 4.79 7.47 7.46 14 IG42_SR10 SilentIntergenicRegion 0 11.78 21.06 3.85 13.62 8.90 3.83 13.70 3.00 7.00 5.31 3.28 12.68 20.35 2.34 2.95 5.48 2.59 4.48 8.51 16.21 2.15 0.16 1.87 15 IG42_AR16 ActiveIntergenicRegion 0 9.79 28.22 2.45 18.57 5.35 0.69 6.12 5.19 4.94 5.73 3.87 8.66 8.79 0.00 3.63 8.17 7.84 0.00 9.56 25.53 4.96 0.00 2.94 16 IG42_AR15 ActiveIntergenicRegion 0 12.59 23.49 2.71 16.32 14.22 1.83 12.19 8.19 7.05 2.38 2.44 16.98 14.07 0.00 11.15 2.66 8.08 4.47 8.13 22.17 2.38 0.71 2.32 17 IG42_AR14 ActiveIntergenicRegion 0 10.68 20.27 4.01 13.00 12.55 1.09 10.31 3.17 4.60 2.30 1.46 10.25 19.94 2.34 4.29 5.68 3.31 3.89 4.80 14.79 0.96 1.55 2.28 18 IG42_SR9 SilentIntergenicRegion 0 12.50 25.62 5.66 19.98 15.57 4.59 12.01 4.76 5.58 4.97 1.66 11.53 18.70 1.98 3.98 4.01 4.39 5.62 8.33 17.59 1.75 1.43 2.42 19 IG42_AR13 ActiveIntergenicRegion 0 16.26 21.45 10.78 26.36 21.03 4.73 15.76 9.56 8.46 8.33 4.40 12.07 14.56 5.97 5.74 7.36 6.26 14.56 11.63 23.38 1.76 1.29 4.48 20 IG42_SR8 SilentIntergenicRegion 0 7.42 17.11 6.23 14.67 19.24 3.86 11.54 5.63 4.37 7.61 4.12 14.36 15.08 4.25 7.02 4.83 5.07 13.66 5.81 16.85 1.55 0.80 3.95 21 IG42_AR12 ActiveIntergenicRegion 0 20.34 29.62 11.93 26.47 21.15 5.90 18.56 9.73 8.24 11.39 4.66 21.51 22.56 6.71 5.89 8.42 5.19 17.84 11.78 24.85 2.53 2.29 4.41 22 IG42_SR7 SilentIntergenicRegion 0 17.13 35.60 7.39 22.55 24.93 2.93 16.57 9.21 9.35 12.22 5.27 13.11 11.89 5.59 7.90 5.03 7.77 17.55 17.37 26.82 3.53 2.55 5.80 23 IG42_AR11 ActiveIntergenicRegion 0 19.26 34.90 16.19 25.60 29.98 4.49 23.33 10.52 12.88 18.75 2.71 34.09 24.91 5.99 7.71 6.24 7.70 21.76 16.36 23.83 1.80 1.46 1.37 24 IG42_AR6 ActiveIntergenicRegion 0 52.11 34.28 14.69 11.77 60.04 8.56 22.16 9.14 6.88 8.94 1.81 15.15 7.27 3.25 12.08 5.94 3.70 9.11 21.01 25.32 1.24 1.93 4.94