Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC020928.5 Gene 0 24.40 71.46 41.34 34.88 34.63 31.53 44.47 30.95 26.02 34.80 1.63 9.72 23.62 10.13 12.70 13.68 7.80 26.38 43.92 54.16 8.64 8.08 9.77 2 500219 Transcript 0 17.30 32.89 18.79 12.11 14.58 25.61 26.30 14.93 19.22 19.26 2.85 2.17 7.15 4.57 5.97 7.25 3.11 21.80 21.75 25.56 4.32 3.54 3.96 3 501367 Transcript 0 10.10 17.26 18.16 17.76 20.34 17.41 13.15 15.62 10.45 16.87 0.05 6.39 8.03 5.94 5.20 4.43 1.86 7.08 11.81 19.08 5.70 4.42 3.17 4 ER1a ExonRegion 0 33.22 32.23 16.33 5.93 19.60 82.32 36.75 3.83 8.86 10.62 0.00 0.00 0.00 6.36 16.21 12.15 2.87 38.88 46.12 40.61 6.47 4.21 8.24 5 E1_Ab KnownBoundary 0 117.43 90.31 80.75 26.27 55.26 222.43 141.59 36.56 36.60 72.74 0.00 0.00 0.00 15.54 14.71 32.56 7.95 168.30 138.45 108.47 13.65 11.88 28.08 6 ER1b ExonRegion 0 13.47 21.24 26.03 13.24 15.02 29.85 20.72 16.24 20.94 25.70 0.00 0.73 0.00 7.34 9.66 14.23 6.23 50.74 49.99 53.02 8.19 4.17 8.17 7 E1_Da NovelBoundary 0 14.52 12.76 0.00 0.00 4.33 9.71 9.98 0.00 6.51 2.53 0.00 0.00 0.00 0.00 4.45 4.36 0.00 6.72 0.00 8.82 2.97 0.00 4.01 8 E1a_E2a KnownJunction 0 2.96 18.88 8.57 5.39 7.64 14.65 4.20 0.00 10.13 7.47 0.00 0.00 0.00 2.47 0.00 6.66 0.00 14.18 15.53 17.77 2.97 3.12 0.00 9 E2_Aa NovelBoundary 0 3.04 13.16 21.85 24.61 10.44 2.90 5.87 21.73 18.78 21.03 0.00 0.00 0.00 0.00 0.00 4.36 0.00 13.22 0.00 16.30 3.03 0.00 0.00 10 ER2a ExonRegion 0 8.21 17.85 8.47 4.14 27.91 81.64 49.56 5.16 8.54 7.59 1.27 4.03 9.78 6.86 7.90 5.33 0.11 8.79 29.60 36.13 5.85 3.56 4.96 11 E2_Da NovelBoundary 0 21.86 67.49 43.85 44.65 22.92 24.76 23.76 44.65 42.04 54.88 5.05 0.00 13.64 14.54 8.90 12.22 38.62 27.90 18.92 107.44 22.30 13.84 18.35 12 E2a_E3a KnownJunction 0 21.26 36.38 28.21 11.19 11.63 20.05 40.32 35.49 58.30 46.71 11.74 0.00 0.00 5.12 0.00 8.54 3.46 43.11 12.80 26.53 6.30 5.39 0.00 13 E2a_E5a KnownJunction 0 0.00 9.27 8.46 3.26 16.89 7.67 1.77 9.98 6.57 10.45 0.00 0.00 0.00 7.36 4.45 0.00 0.00 0.00 3.95 6.39 5.62 0.00 0.00 14 E2a_E6a NovelJunction 0 0.00 22.56 8.13 11.75 27.59 67.01 15.99 16.96 6.74 17.62 0.00 0.00 0.00 12.83 0.00 3.16 0.00 12.52 9.60 27.29 2.59 2.27 0.00 15 I2 Intron 0 14.00 28.77 19.88 21.71 18.79 10.27 26.55 22.29 14.80 20.36 2.56 3.79 9.63 5.03 3.42 11.80 6.38 13.66 19.13 27.94 4.49 2.76 6.58 16 I2_AR1 ActiveIntronRegion 0 20.27 33.65 21.40 26.26 16.02 8.56 24.87 20.36 14.95 18.81 2.62 4.93 8.82 5.19 3.22 11.97 6.56 9.52 13.81 32.03 6.85 3.60 7.34 17 I2_SR1 SilentIntronRegion 0 6.95 23.35 18.24 16.62 22.00 12.26 28.57 24.58 14.69 22.20 2.49 2.50 10.58 4.87 3.67 11.66 6.21 18.42 25.27 23.39 1.81 1.82 5.74 18 E3_Aa NovelBoundary 0 16.23 18.09 13.90 10.59 11.04 14.99 21.02 13.18 10.73 8.11 7.00 12.90 6.17 0.00 5.56 7.35 28.99 20.77 25.22 10.10 10.63 11.02 4.18 19 ER3a ExonRegion 0 26.45 95.68 46.60 38.59 37.49 25.59 53.98 34.96 28.63 38.61 2.49 10.86 29.64 11.40 13.66 15.54 9.23 27.02 49.85 59.79 8.83 8.11 11.58 20 E3_Da NovelBoundary 0 151.36 229.37 224.71 303.52 168.76 130.72 299.38 262.09 233.24 214.63 45.85 34.06 41.88 18.60 40.55 215.58 151.38 242.42 179.30 250.68 98.53 40.66 149.56 21 E3a_E4a KnownJunction 0 3.33 0.00 1.83 3.83 3.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4_Aa NovelBoundary 1 121.28 143.33 408.77 500.54 134.55 85.18 109.66 447.54 351.76 395.33 12.58 5.25 20.94 13.60 67.00 80.49 99.49 480.82 53.65 84.63 75.80 92.95 216.22 23 ER4a ExonRegion 0 2.23 0.16 0.99 1.03 0.80 0.10 0.47 0.37 0.30 0.34 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.86 0.00 0.00 0.00 24 E4_Da NovelBoundary 0 208.11 121.82 39.32 62.76 179.80 83.47 156.07 52.16 39.38 31.83 14.85 33.31 28.24 12.66 14.34 83.14 78.54 40.29 95.44 84.82 24.59 42.56 38.41 25 I4 Intron 0 11.74 30.45 17.15 20.59 18.90 16.75 30.10 13.65 13.78 14.61 0.09 4.11 14.06 3.24 4.64 9.17 3.77 16.80 21.37 32.21 3.16 3.36 6.26 26 I4_SR1 SilentIntronRegion 0 10.51 25.62 15.03 20.29 24.28 16.69 26.94 15.66 11.71 13.20 0.00 3.93 9.88 2.48 3.71 6.84 3.45 14.24 20.16 24.61 2.27 2.55 4.05 27 I4_AR1 ActiveIntronRegion 0 10.20 21.08 19.16 25.77 17.76 25.66 46.14 18.77 19.77 15.07 0.00 3.18 21.34 3.14 4.21 10.44 3.58 20.82 29.13 37.45 2.49 3.92 7.52 28 I4_SR2 SilentIntronRegion 0 20.54 45.04 22.35 14.70 14.14 16.05 26.97 11.83 11.60 16.86 0.00 1.71 10.03 4.72 4.48 19.33 5.80 27.62 29.82 40.14 9.81 5.18 6.59 29 I4_AR2 ActiveIntronRegion 0 19.03 44.87 29.71 24.22 15.86 16.67 28.39 17.89 20.70 19.12 0.00 0.76 8.97 2.86 6.09 13.63 6.75 29.38 40.17 40.94 5.75 2.75 8.85 30 I4_SR3 SilentIntronRegion 0 9.05 19.75 12.06 20.52 17.94 17.64 42.06 13.51 13.41 16.28 0.00 5.52 13.29 2.87 1.99 11.55 3.85 16.53 17.63 43.60 3.43 3.04 5.13 31 I4_SR4 SilentIntronRegion 0 10.27 33.70 15.98 18.37 19.61 10.26 19.21 8.59 11.48 11.95 0.32 6.14 14.24 4.44 6.72 6.45 3.06 12.20 13.47 25.65 1.80 3.24 7.17 32 I4_AR4 ActiveIntronRegion 0 11.73 42.60 13.25 18.65 14.26 15.08 25.69 9.01 10.32 19.04 0.00 6.81 20.65 0.94 4.48 4.60 2.20 7.96 10.48 29.68 1.84 4.02 6.55 33 I4_AR5 ActiveIntronRegion 0 5.84 27.03 9.68 20.87 12.77 21.06 26.90 10.36 9.84 5.53 0.79 0.00 22.92 5.85 6.67 2.30 1.36 4.86 8.73 26.36 0.91 5.07 5.75 34 Ix Intron 0 12.14 19.55 11.18 14.39 20.87 11.17 21.97 7.80 7.87 10.29 0.41 5.22 12.12 1.79 7.14 4.97 4.00 5.47 12.82 21.97 1.41 3.56 3.45 35 Ix_SR1 SilentIntronRegion 0 12.15 19.58 11.20 14.41 20.90 11.18 22.00 7.81 7.88 10.30 0.41 5.23 12.14 1.80 7.15 4.98 4.00 5.48 12.84 22.01 1.41 3.57 3.46 36 Ix Intron 0 17.86 28.36 15.41 20.49 20.62 14.13 16.52 7.09 9.79 12.23 0.00 0.65 14.37 1.93 2.41 8.17 5.45 9.27 14.61 25.37 2.43 2.29 3.77 37 Ix_AR1 ActiveIntronRegion 0 17.99 28.57 15.52 20.63 20.77 14.23 16.64 7.14 9.86 12.32 0.00 0.66 14.48 1.94 2.43 8.23 5.49 9.34 14.71 25.55 2.44 2.31 3.80 38 E5_Aa NovelBoundary 0 32.01 47.89 42.58 49.88 18.68 40.54 26.67 35.12 28.15 44.40 5.37 0.00 6.33 12.54 24.72 37.17 31.60 39.75 50.92 68.58 23.85 12.98 31.93 39 ER5a ExonRegion 0 4.12 9.41 6.46 11.62 16.11 4.31 11.20 10.18 3.47 9.82 0.00 5.09 6.70 6.75 1.79 3.14 0.00 5.73 5.25 8.28 3.49 1.99 1.87 40 E5_Da NovelBoundary 0 3.70 10.06 22.68 20.18 17.15 7.89 11.22 9.28 15.83 14.64 0.00 0.00 6.82 2.12 0.00 4.36 0.00 10.69 28.14 36.37 3.15 0.00 11.27 41 E5a_E6a KnownJunction 0 5.85 5.26 8.93 7.79 3.90 8.40 4.37 4.31 1.24 6.74 0.00 6.30 0.00 0.00 0.00 3.16 0.00 4.44 4.80 8.88 3.15 2.69 3.24 42 Ix Intron 0 18.58 25.71 23.24 26.20 26.27 23.82 24.85 20.47 14.55 25.24 0.00 4.59 17.99 3.16 6.56 8.91 2.29 17.02 29.89 40.02 7.17 5.34 8.67 43 Ix_SR1 SilentIntronRegion 0 21.90 28.72 25.65 27.53 29.67 25.20 26.40 22.80 16.98 27.71 0.00 4.88 18.24 3.32 7.03 9.89 2.56 18.13 32.02 44.07 7.85 5.54 9.50 44 Ix_AR2 ActiveIntronRegion 0 8.03 18.72 20.68 27.66 18.86 23.58 25.07 15.76 8.49 21.45 0.00 5.54 21.93 2.95 5.02 6.18 2.05 13.59 33.02 35.61 6.30 6.68 3.08 45 Ix Intron 0 10.10 15.75 18.85 18.75 16.95 21.52 18.85 16.12 10.80 15.64 0.00 7.33 15.30 3.77 3.43 10.23 2.84 18.47 28.40 28.13 7.41 4.56 8.96 46 Ix_AR1 ActiveIntronRegion 0 9.24 6.55 5.35 7.51 20.62 11.49 18.47 8.47 5.12 4.81 0.00 3.38 27.23 2.50 0.00 12.18 0.00 9.28 26.80 16.87 4.73 0.00 4.44 47 Ix_AR2 ActiveIntronRegion 0 16.67 23.68 33.02 25.19 14.08 12.21 26.21 13.99 16.29 22.37 0.00 17.79 19.08 6.27 2.94 15.59 2.44 22.86 55.85 42.00 9.99 5.91 11.67 48 Ix_SR1 SilentIntronRegion 0 15.91 13.31 29.74 18.30 29.27 31.12 19.34 13.36 14.26 21.20 0.00 4.07 21.60 5.46 2.90 13.06 4.90 26.54 21.14 29.59 8.61 8.08 13.35 49 Ix_AR3 ActiveIntronRegion 0 11.61 22.68 20.51 27.44 21.00 33.44 24.97 24.43 15.29 19.15 0.00 7.44 18.18 3.87 3.84 14.19 4.28 23.65 27.57 34.38 6.44 6.76 9.12 50 Ix_AR4 ActiveIntronRegion 0 10.19 17.95 17.90 22.25 15.14 22.51 17.07 19.15 11.21 14.89 0.00 13.27 10.31 4.98 4.54 6.77 0.87 19.30 33.74 33.03 6.81 4.08 13.02 51 Ix_AR5 ActiveIntronRegion 0 2.49 6.17 15.71 17.43 17.11 15.72 13.43 17.84 6.09 23.55 0.00 5.88 6.53 4.99 1.24 6.37 3.89 18.15 21.84 31.84 10.39 6.25 6.71 52 Ix_SR2 SilentIntronRegion 0 5.86 7.20 13.12 6.74 10.67 11.77 9.81 7.42 4.26 9.12 0.00 2.15 9.70 1.89 3.88 4.23 2.20 10.63 18.66 14.28 7.77 1.66 6.52 53 E6_Aa NovelBoundary 0 38.23 97.42 37.61 35.86 46.43 59.74 32.42 28.79 34.72 17.49 0.00 18.91 6.01 2.47 9.89 24.18 4.77 18.94 17.04 56.57 13.90 12.19 21.77 54 ER6a ExonRegion 0 30.43 45.11 48.78 48.35 44.45 49.27 35.28 38.01 30.50 40.49 0.22 14.15 25.43 9.65 14.56 11.44 7.45 18.15 33.23 52.78 10.55 13.00 7.58