Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC073534.1 Gene 0 1.53 0.74 0.00 0.00 9.94 0.67 1.90 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.36 0.00 0.44 0.76 2.54 0.00 0.25 0.35 2 430563 Transcript 0 0.47 0.00 0.00 0.00 6.68 0.00 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.03 1.02 0.00 0.00 0.00 3 441339 Transcript 0 0.90 0.42 0.00 0.00 3.67 0.48 0.78 0.00 0.00 0.00 0.00 0.00 0.00 0.06 0.00 0.13 0.00 0.21 0.34 1.03 0.00 0.09 0.13 4 IG41 Intergenic 0 3.25 13.47 4.20 14.28 18.48 6.20 20.34 7.88 9.91 8.94 0.36 0.82 0.47 0.39 0.37 1.33 0.86 6.64 3.60 25.76 0.17 2.33 2.06 5 IG41_AR1 ActiveIntergenicRegion 0 2.55 12.11 2.76 4.03 27.40 2.04 38.38 13.92 16.40 15.11 0.00 0.52 0.00 0.54 0.97 1.40 0.00 0.51 1.56 18.58 0.00 0.98 5.08 6 IG41_SR1 SilentIntergenicRegion 0 4.36 9.88 3.45 15.20 14.51 4.58 24.78 13.15 21.41 16.89 0.55 1.51 1.31 1.10 1.23 3.24 1.88 5.36 7.25 27.51 0.63 2.67 4.23 7 IG41_AR2 ActiveIntergenicRegion 0 1.47 16.66 2.23 14.03 6.18 2.88 19.90 5.38 9.44 10.09 0.27 4.62 1.86 0.00 0.58 2.15 0.46 2.14 1.79 24.79 0.00 0.71 0.83 8 IG41_SR2 SilentIntergenicRegion 0 3.60 16.91 3.69 16.20 15.90 6.53 29.85 8.94 11.45 10.77 0.54 1.40 0.81 0.60 0.51 2.04 1.42 7.44 4.55 31.79 0.24 2.69 3.15 9 IG41_AR3 ActiveIntergenicRegion 0 5.58 8.71 1.84 5.10 11.52 2.30 14.45 5.83 4.62 9.02 0.00 0.00 0.97 0.34 0.73 0.75 1.66 5.31 3.20 21.77 0.00 3.36 2.95 10 IG41_SR3 SilentIntergenicRegion 0 3.75 16.87 3.23 14.89 15.48 6.26 20.11 7.26 4.80 7.35 0.08 0.24 0.16 0.26 0.27 1.79 1.33 6.29 3.07 20.07 0.07 2.68 1.83 11 IG41_AR4 ActiveIntergenicRegion 0 4.57 10.44 2.50 9.85 12.31 4.59 13.03 5.16 3.60 4.48 0.71 0.00 0.00 0.35 0.00 1.00 0.67 13.74 3.87 21.63 0.74 1.76 2.06 12 IG41_AR5 ActiveIntergenicRegion 0 3.41 14.02 7.09 24.74 18.28 6.10 21.61 11.58 12.66 15.96 0.35 0.53 0.90 0.19 0.30 1.30 0.00 12.21 6.23 42.23 0.00 2.91 1.28 13 IG41_SR4 SilentIntergenicRegion 0 3.91 11.31 8.65 22.84 25.15 5.68 19.02 11.40 14.14 15.99 0.00 0.93 0.72 0.18 0.54 1.57 1.31 6.13 3.65 37.41 0.00 4.52 0.39 14 IG41_AR6 ActiveIntergenicRegion 0 3.47 13.53 4.10 14.12 20.97 7.32 20.61 9.98 7.15 11.85 0.56 1.03 0.00 0.26 0.20 0.57 0.64 3.81 0.31 25.98 0.00 3.39 0.28 15 IG41_SR5 SilentIntergenicRegion 0 0.00 4.41 0.00 10.94 15.62 4.51 18.28 4.12 4.98 8.69 0.00 0.00 0.00 0.00 0.71 0.00 0.00 3.73 0.99 26.90 0.00 2.97 0.00 16 IG41_SR6 SilentIntergenicRegion 0 1.20 9.51 2.16 7.52 14.22 4.43 10.58 3.98 5.63 4.08 0.30 0.36 0.16 0.15 0.18 0.07 0.15 2.80 2.10 20.81 0.00 1.28 0.93 17 IG41_AR8 ActiveIntergenicRegion 0 4.09 11.52 9.64 27.73 34.46 14.88 24.55 8.29 18.02 7.26 0.50 0.46 0.00 0.17 0.00 0.77 0.00 6.17 5.33 28.77 0.00 2.15 2.27 18 IG41_SR7 SilentIntergenicRegion 0 3.91 13.77 8.11 16.01 35.02 9.11 12.03 8.22 11.53 6.80 0.09 0.00 0.00 0.28 0.00 0.48 0.15 9.13 2.95 20.21 0.05 2.21 1.22 19 ER1a ExonRegion 0 1.37 0.00 0.00 0.00 19.99 0.00 3.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 2.88 0.00 0.00 0.00 20 E1_Da NovelBoundary 0 6.30 2.43 2.72 13.02 75.30 15.39 15.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.22 0.00 2.43 0.00 0.00 0.00 21 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 19.49 0.00 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 4.03 0.00 0.00 0.00 24 E2_Aa NovelBoundary 0 7.33 6.18 0.00 2.06 27.25 7.38 7.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 0.00 0.00 25 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 0.00 0.00 0.00 26 E2_Da NovelBoundary 0 14.74 2.50 0.00 2.06 47.79 5.22 1.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 3.00 0.00 0.00 0.00 27 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E3_Aa NovelBoundary 0 10.52 3.35 0.00 0.00 40.24 17.60 16.16 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.90 0.00 8.12 0.00 5.63 0.00 29 ER3a ExonRegion 0 1.69 1.40 0.00 0.00 8.82 0.03 4.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.05 1.83 0.00 0.00 0.00 30 E3_Da NovelBoundary 0 3.56 5.33 1.66 3.80 28.35 7.21 13.60 0.00 1.27 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 0.00 17.26 0.00 0.00 0.00 31 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E4_Aa NovelBoundary 0 10.89 2.89 3.52 5.09 16.04 5.34 3.75 2.14 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 4.80 9.65 0.00 0.00 0.00 33 ER4a ExonRegion 0 0.05 0.00 0.00 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.18 0.00 0.00 0.00 34 E4_Da NovelBoundary 0 3.33 3.35 4.97 5.43 24.53 8.63 8.44 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 35 E5_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 23.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER5a ExonRegion 0 6.63 2.61 0.00 0.00 10.70 1.83 2.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 4.26 0.00 0.00 0.00 37 E5_Da NovelBoundary 0 0.00 5.99 0.00 0.00 35.91 5.39 13.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 2.88 0.00 5.08 0.00 38 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER6a ExonRegion 0 1.32 0.00 0.00 0.00 2.17 0.46 0.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.80 0.53 0.00 0.00 0.00 41 ER7a ExonRegion 0 1.14 1.09 0.00 0.00 17.38 0.19 2.13 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.00 1.60 0.00 0.99 0.00 5.71 0.00 1.12 1.58 42 E7_Da NovelBoundary 0 7.48 3.29 9.46 9.89 21.22 16.64 8.35 2.34 3.01 0.00 0.00 0.00 0.00 2.24 0.00 0.00 0.00 4.23 0.00 6.01 0.00 0.00 0.00 43 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 E8_Aa NovelBoundary 0 0.00 0.00 0.00 1.50 26.40 2.90 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 10.10 0.00 2.39 0.00 45 ER8a ExonRegion 0 0.00 0.00 0.00 0.00 4.95 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 IG42_AR6 ActiveIntergenicRegion 0 52.11 34.28 14.69 11.77 60.04 8.56 22.16 9.14 6.88 8.94 1.81 15.15 7.27 3.25 12.08 5.94 3.70 9.11 21.01 25.32 1.24 1.93 4.94 47 IG42_AR11 ActiveIntergenicRegion 0 19.26 34.90 16.19 25.60 29.98 4.49 23.33 10.52 12.88 18.75 2.71 34.09 24.91 5.99 7.71 6.24 7.70 21.76 16.36 23.83 1.80 1.46 1.37 48 IG42_SR7 SilentIntergenicRegion 0 17.13 35.60 7.39 22.55 24.93 2.93 16.57 9.21 9.35 12.22 5.27 13.11 11.89 5.59 7.90 5.03 7.77 17.55 17.37 26.82 3.53 2.55 5.80 49 IG42_AR12 ActiveIntergenicRegion 0 20.34 29.62 11.93 26.47 21.15 5.90 18.56 9.73 8.24 11.39 4.66 21.51 22.56 6.71 5.89 8.42 5.19 17.84 11.78 24.85 2.53 2.29 4.41 50 IG42_SR8 SilentIntergenicRegion 0 7.42 17.11 6.23 14.67 19.24 3.86 11.54 5.63 4.37 7.61 4.12 14.36 15.08 4.25 7.02 4.83 5.07 13.66 5.81 16.85 1.55 0.80 3.95 51 IG42_AR13 ActiveIntergenicRegion 0 16.26 21.45 10.78 26.36 21.03 4.73 15.76 9.56 8.46 8.33 4.40 12.07 14.56 5.97 5.74 7.36 6.26 14.56 11.63 23.38 1.76 1.29 4.48 52 IG42_SR9 SilentIntergenicRegion 0 12.50 25.62 5.66 19.98 15.57 4.59 12.01 4.76 5.58 4.97 1.66 11.53 18.70 1.98 3.98 4.01 4.39 5.62 8.33 17.59 1.75 1.43 2.42 53 IG42_AR14 ActiveIntergenicRegion 0 10.68 20.27 4.01 13.00 12.55 1.09 10.31 3.17 4.60 2.30 1.46 10.25 19.94 2.34 4.29 5.68 3.31 3.89 4.80 14.79 0.96 1.55 2.28 54 IG42_AR15 ActiveIntergenicRegion 0 12.59 23.49 2.71 16.32 14.22 1.83 12.19 8.19 7.05 2.38 2.44 16.98 14.07 0.00 11.15 2.66 8.08 4.47 8.13 22.17 2.38 0.71 2.32 55 IG42_AR16 ActiveIntergenicRegion 0 9.79 28.22 2.45 18.57 5.35 0.69 6.12 5.19 4.94 5.73 3.87 8.66 8.79 0.00 3.63 8.17 7.84 0.00 9.56 25.53 4.96 0.00 2.94 56 IG42_SR10 SilentIntergenicRegion 0 11.78 21.06 3.85 13.62 8.90 3.83 13.70 3.00 7.00 5.31 3.28 12.68 20.35 2.34 2.95 5.48 2.59 4.48 8.51 16.21 2.15 0.16 1.87