Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC074138.2 Gene 0 23.31 24.87 24.18 29.37 16.16 12.84 17.40 19.60 21.30 23.85 14.81 14.14 20.83 11.51 12.80 22.62 13.90 18.55 16.49 26.24 6.37 4.23 5.51 2 433232 Transcript 0 11.72 6.58 1.49 2.86 1.37 1.88 0.93 1.06 2.55 1.48 0.60 0.00 0.00 3.41 2.10 3.24 1.90 1.50 0.68 2.53 0.08 0.36 0.33 3 425254 Transcript 0 17.97 26.05 20.39 32.20 23.88 15.85 19.21 15.64 20.35 22.43 8.16 18.46 27.35 10.95 10.86 23.40 12.14 17.98 24.48 25.18 3.99 3.15 5.69 4 ER1a ExonRegion 0 23.44 13.17 1.29 3.65 2.74 3.76 1.85 2.12 5.09 2.95 1.21 0.00 0.00 6.82 4.21 2.97 3.80 3.00 1.35 5.05 0.17 0.73 0.66 5 E1_Ab KnownBoundary 0 89.42 49.60 7.24 9.39 7.47 18.91 12.72 5.30 16.09 7.49 2.11 0.00 0.00 17.07 13.35 7.60 15.33 12.73 7.91 14.19 0.00 2.69 6.57 6 ER1b ExonRegion 0 28.51 20.19 9.39 9.26 3.07 6.84 10.47 13.06 9.54 12.91 7.65 0.00 1.22 4.33 6.13 11.55 10.65 14.85 3.19 11.42 6.60 2.04 4.03 7 E1_Da NovelBoundary 0 0.00 0.00 1.42 1.93 0.00 2.16 0.00 0.00 14.61 18.21 5.16 6.30 0.00 2.71 0.00 0.00 0.00 6.59 13.18 12.08 5.19 0.00 0.00 8 E1a_E2a KnownJunction 0 3.04 2.89 11.97 9.22 0.00 0.00 0.00 17.70 3.99 9.89 9.48 0.00 12.99 4.89 11.37 24.35 21.88 15.79 0.00 5.88 3.15 0.00 0.00 9 I1 Intron 0 3.28 6.97 6.26 4.94 4.44 3.65 4.54 7.98 15.68 12.48 2.99 1.47 0.85 4.02 4.98 5.92 5.48 19.10 4.58 16.01 6.09 1.15 3.90 10 I1_AR1 ActiveIntronRegion 0 2.18 5.56 7.13 5.14 3.29 3.46 5.21 6.59 18.22 13.24 2.69 1.91 0.00 4.27 4.84 8.27 5.90 20.57 4.08 17.39 7.08 1.07 3.47 11 I1_SR1 SilentIntronRegion 0 5.33 9.65 4.76 4.64 6.61 4.04 3.37 10.63 11.22 11.24 3.59 0.67 2.43 3.60 5.32 1.69 4.77 16.63 5.56 13.65 4.35 1.31 4.73 12 E2_Aa NovelBoundary 0 21.71 18.02 16.23 8.22 21.22 0.00 22.30 19.18 13.37 15.34 5.00 0.00 0.00 2.47 19.78 35.12 8.70 17.24 13.27 26.08 6.30 2.69 3.76 13 ER2a ExonRegion 0 2.50 13.63 22.92 24.93 5.51 7.65 12.44 26.64 17.10 19.36 22.30 15.10 20.85 16.64 17.98 32.60 11.13 18.55 17.09 35.68 9.51 5.54 15.05 14 E2_Da NovelBoundary 0 11.34 11.18 12.39 13.92 23.77 7.04 5.61 12.49 1.16 13.97 2.05 6.30 0.00 9.42 9.77 7.95 4.49 14.34 0.00 12.21 3.09 0.00 11.01 15 E2a_E3a KnownJunction 0 0.00 8.16 38.85 24.07 0.00 2.67 8.66 17.70 16.20 18.40 24.64 18.46 20.13 7.59 0.00 34.78 4.30 17.95 12.89 11.89 2.72 8.21 17.07 16 I2 Intron 0 16.58 9.44 7.17 10.67 6.90 3.78 9.03 6.91 8.54 7.78 4.40 5.17 4.98 5.28 7.16 9.51 4.77 9.97 5.26 14.05 2.05 0.21 3.33 17 I2_AR2 ActiveIntronRegion 0 17.46 10.73 9.24 12.15 7.61 1.80 15.63 12.98 7.35 10.75 5.23 9.70 6.43 5.67 6.21 10.48 4.80 15.89 5.78 13.42 1.84 0.62 3.18 18 I2_SR1 SilentIntronRegion 0 21.49 10.40 7.39 8.92 7.85 4.70 6.91 5.51 10.40 6.98 4.34 2.29 4.45 3.62 8.35 10.13 3.13 6.08 4.90 13.43 1.04 0.00 3.30 19 E3_Aa NovelBoundary 0 10.82 17.96 18.07 26.17 15.87 5.22 10.16 14.79 22.45 22.78 4.05 6.90 6.82 18.89 0.00 25.89 3.65 18.99 16.75 29.72 7.17 3.12 11.18 20 ER3a ExonRegion 0 47.00 33.30 45.41 32.70 12.57 16.63 20.49 29.56 28.20 39.08 35.26 14.78 18.45 14.55 21.62 30.35 21.04 27.70 17.87 35.62 13.48 7.12 5.56 21 E3_Da KnownBoundary 0 234.04 92.35 63.19 51.08 24.53 25.44 20.71 42.55 34.00 70.67 54.91 37.21 60.06 17.42 21.51 96.38 61.34 50.37 60.24 55.42 18.16 17.94 29.54 22 E3a_E3b KnownJunction 0 0.00 0.00 1.69 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER3b ExonRegion 0 23.65 28.08 26.21 43.31 25.80 15.70 22.63 20.39 26.68 27.22 10.67 17.78 26.60 11.26 11.99 23.49 10.84 15.23 16.14 27.59 3.38 5.76 3.05 24 E3_Ab KnownBoundary 1 13.56 34.93 39.38 62.23 41.26 17.49 36.66 36.06 34.72 29.20 4.69 31.96 6.17 11.77 19.16 28.28 17.02 15.50 54.03 32.41 0.00 0.00 4.35 25 ER3c ExonRegion 1 6.50 25.49 23.09 34.00 22.61 10.54 19.60 17.33 31.92 22.26 7.76 21.53 38.38 14.82 9.07 14.15 27.71 23.08 19.74 27.99 3.04 0.56 1.16 26 E3_Db KnownBoundary 0 13.93 17.50 19.48 20.98 36.08 15.16 5.34 11.46 23.35 27.29 12.53 18.76 40.42 4.59 19.53 4.36 32.73 25.04 8.38 28.83 2.41 3.06 0.00 27 ER3d ExonRegion 1 12.30 24.03 14.58 21.09 21.96 15.99 15.79 10.89 14.02 17.65 5.66 19.14 28.10 10.63 9.74 23.31 13.44 20.74 32.81 22.76 4.60 0.53 8.32 28 IG26 Intergenic 0 15.89 17.53 15.37 27.51 21.24 11.51 17.65 14.19 18.79 18.10 3.79 7.54 8.52 5.72 7.43 7.28 4.93 10.83 11.70 16.44 2.99 2.81 4.83 29 IG26_SR3 SilentIntergenicRegion 0 11.90 19.09 23.46 33.54 20.88 10.17 22.74 11.48 23.28 23.94 8.28 8.15 10.66 11.14 5.96 9.28 9.87 7.03 10.53 20.30 1.61 2.34 2.87 30 IG26_AR3 ActiveIntergenicRegion 0 19.11 30.30 22.95 43.96 21.95 14.52 20.10 18.87 29.51 28.80 7.07 19.89 18.27 10.20 9.33 9.89 7.49 5.45 9.68 22.53 1.99 3.70 2.41 31 IG26_SR2 SilentIntergenicRegion 0 18.87 18.01 14.89 28.42 25.61 12.54 19.92 15.75 18.30 17.31 3.13 6.97 8.77 4.72 7.77 6.90 4.15 8.52 11.28 15.42 2.45 2.85 4.30 32 IG26_AR2 ActiveIntergenicRegion 0 10.05 13.22 13.77 20.34 11.39 7.99 13.68 10.89 18.06 19.34 4.53 3.11 2.78 6.90 8.37 7.89 6.98 28.11 17.79 25.08 6.81 2.46 9.63