Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TM6SF2 Gene 0 1.44 3.85 17.45 15.68 1.42 7.05 2.86 3.81 7.46 7.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.71 10.74 7.62 2.02 18.31 23.98 2 431465 Transcript 0 0.34 2.34 12.57 8.15 0.00 2.41 1.03 2.47 5.06 6.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.37 3.72 6.65 2.41 6.61 14.00 3 269990 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 389363 Transcript 0 0.66 3.07 24.80 21.59 1.00 5.79 2.53 4.26 9.21 9.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.70 10.06 6.12 2.31 23.07 24.85 5 ER1a ExonRegion 0 0.00 0.00 1.62 2.18 0.00 0.00 0.00 0.91 2.23 2.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 3.36 2.25 0.78 3.76 9.74 6 E1a_E2a KnownJunction 0 0.00 0.00 3.08 0.00 0.00 0.00 0.00 0.00 2.69 2.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 2.68 0.00 4.90 7.85 7 E2_Aa NovelBoundary 0 3.63 0.00 17.71 10.49 0.00 11.70 6.45 0.00 5.15 7.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.62 18.64 9.46 0.00 5.69 20.49 8 ER2a ExonRegion 0 0.00 4.05 10.18 10.51 1.80 1.71 1.95 0.63 7.03 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.25 7.23 8.00 2.14 9.76 9.94 9 E2_Da NovelBoundary 0 0.00 0.00 12.12 8.96 0.00 0.00 4.28 1.73 1.42 6.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.18 0.00 3.26 0.00 0.00 16.82 10 E2a_E3a KnownJunction 0 0.00 0.00 5.17 4.10 4.24 2.27 4.50 4.72 7.38 2.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.89 7.44 3.00 0.00 2.88 12.46 11 E3_Aa NovelBoundary 0 0.00 5.13 3.43 1.47 0.00 5.39 2.12 2.55 1.59 1.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.50 0.00 0.00 0.00 11.51 0.00 12 ER3a ExonRegion 0 0.00 3.28 8.75 5.63 0.87 12.41 1.50 1.64 8.94 7.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.63 4.32 6.34 1.73 14.97 13.90 13 E3_Da KnownBoundary 0 0.00 6.58 19.54 9.56 0.00 0.00 1.77 2.14 6.94 8.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.03 4.05 12.59 3.15 10.84 8.02 14 E3a_E3b KnownJunction 0 0.00 0.00 3.67 1.30 0.00 0.00 0.00 0.00 2.55 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 9.19 8.71 15 ER3b ExonRegion 0 0.06 2.77 15.01 7.72 0.00 1.04 0.88 1.55 5.58 6.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.82 1.80 7.65 1.69 6.22 14.60 16 E3_Ab KnownBoundary 0 0.00 0.00 10.59 12.85 0.00 5.11 0.00 2.55 7.49 1.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 2.43 3.15 4.78 7.60 17 ER3c ExonRegion 0 1.01 1.93 19.24 10.24 0.00 4.84 1.26 3.83 11.97 6.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.28 7.21 8.30 1.80 18.77 23.07 18 E3_Db KnownBoundary 0 0.00 3.22 14.99 8.69 0.00 0.00 0.00 3.86 3.07 4.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.63 3.58 0.00 2.47 8.82 20.06 19 E3b_E4a KnownJunction 0 0.00 0.00 4.11 3.06 0.00 0.00 0.00 0.00 5.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.69 4.80 2.43 0.00 8.70 4.35 20 ER3d ExonRegion 0 0.62 1.92 10.14 8.58 0.00 3.78 1.17 3.39 4.53 5.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.92 5.63 5.65 3.13 7.00 13.41 21 I3 Intron 0 1.41 1.35 10.53 15.76 1.19 6.51 1.76 1.14 5.31 5.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.68 9.89 5.66 1.47 8.78 26.05 22 I3_AR1 ActiveIntronRegion 0 1.42 1.36 10.62 15.90 1.20 6.56 1.78 1.15 5.35 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.82 9.98 5.71 1.48 8.85 26.28 23 E4_Aa NovelBoundary 0 0.00 2.96 26.05 20.54 0.00 5.34 5.65 1.60 6.45 6.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.65 3.67 10.99 0.00 14.45 38.24 24 ER4a ExonRegion 0 3.83 6.66 8.36 7.06 1.64 4.55 6.00 0.19 6.35 5.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.35 14.66 8.69 1.35 16.64 27.35 25 E4_Da NovelBoundary 0 0.00 0.00 10.38 7.66 0.00 13.91 2.12 0.00 4.22 5.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.07 4.14 0.00 0.00 4.96 11.69 26 E4a_E5a KnownJunction 0 0.00 3.35 10.61 1.73 0.00 0.00 2.25 1.64 6.63 1.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.96 7.91 3.00 0.00 20.27 30.05 27 E4a_E6a NovelJunction 0 0.00 0.00 13.28 5.69 0.00 9.77 0.00 2.55 0.00 3.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.36 9.04 0.00 0.00 2.82 0.00 28 E5_Aa NovelBoundary 0 3.19 2.43 18.30 19.24 0.00 10.90 10.55 4.35 8.36 12.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50.32 21.74 25.95 0.00 27.92 55.57 29 ER5a ExonRegion 0 0.05 3.01 12.92 4.61 2.18 8.46 1.42 4.08 4.20 3.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.32 14.19 3.74 0.95 23.39 29.55 30 E5a_E6a KnownJunction 0 0.00 0.00 15.85 12.09 0.00 15.84 0.00 2.30 9.46 2.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.61 13.46 2.62 0.00 19.47 15.62 31 ER6a ExonRegion 0 1.81 4.31 25.30 22.09 2.68 9.98 9.40 8.95 8.61 7.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.57 20.74 11.33 2.14 31.03 36.22 32 E6a_E7a KnownJunction 0 3.41 12.56 27.08 35.09 0.00 11.30 10.55 15.53 13.17 7.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.30 20.05 9.59 0.00 29.88 35.94 33 ER7a ExonRegion 0 2.98 7.22 30.12 32.99 1.47 28.61 8.91 7.47 9.99 10.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.87 18.19 18.42 1.40 32.06 32.18 34 E7a_E8a KnownJunction 0 3.33 12.23 38.64 31.73 0.00 37.82 2.25 9.86 14.64 10.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.96 36.99 21.86 2.41 32.15 37.39 35 ER8a ExonRegion 0 5.57 5.08 27.74 37.55 3.41 12.10 3.50 4.88 10.21 9.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.69 19.48 10.96 0.83 37.61 39.20 36 E8a_E9a KnownJunction 0 6.30 6.18 35.51 33.83 0.00 5.28 3.75 4.31 5.84 9.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.84 29.93 12.08 0.00 19.96 22.71 37 ER9a ExonRegion 0 4.62 11.54 31.64 26.42 2.34 6.27 7.94 4.68 4.06 12.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.15 17.84 17.76 3.45 22.99 27.71 38 E9_Da KnownBoundary 0 2.89 2.76 25.46 26.27 0.00 0.00 13.73 3.61 5.84 12.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.46 21.93 14.38 2.78 16.47 16.39 39 E9a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER9b ExonRegion 0 0.24 3.32 29.21 24.20 0.78 7.61 3.96 3.37 9.01 10.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.15 10.85 6.28 1.31 28.67 25.28 41 E9_Ab KnownBoundary 0 0.00 16.25 40.03 40.15 4.24 16.13 6.62 4.52 12.73 15.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.80 0.00 6.33 3.09 26.70 51.56 42 ER9c ExonRegion 0 2.84 10.33 26.25 25.91 5.25 11.12 2.94 4.48 9.13 13.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.83 16.68 4.82 2.29 16.37 48.03 43 E9_Db KnownBoundary 0 0.00 9.14 24.93 32.76 3.99 15.16 1.68 16.80 12.50 11.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.21 9.04 11.25 2.47 25.41 57.02 44 ER9d ExonRegion 0 1.08 2.82 20.39 18.98 1.23 3.96 1.11 5.15 9.41 8.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.24 9.28 5.96 3.31 17.48 24.42