Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF43 Gene 0 49.96 78.58 41.92 50.25 96.26 72.93 109.69 83.86 62.58 102.84 22.58 12.57 47.24 23.24 23.64 36.77 38.32 71.37 34.49 135.05 8.71 33.44 20.96 2 397148 Transcript 0 13.86 33.48 37.38 34.11 47.24 16.76 71.11 55.55 19.08 53.91 8.60 2.26 7.46 10.48 14.17 17.80 13.69 85.89 20.74 88.70 3.80 7.77 13.21 3 354959 Transcript 0 16.96 29.88 8.82 5.92 7.21 15.36 12.26 10.54 9.96 14.39 9.20 0.00 2.71 5.88 5.90 14.08 19.28 12.91 13.36 26.24 15.40 5.84 3.71 4 IG14_SR6 SilentIntergenicRegion 0 0.66 2.97 0.14 1.22 11.08 0.19 29.81 5.11 2.41 32.84 0.10 0.00 0.00 0.14 0.00 0.31 0.00 0.92 0.00 0.17 0.00 0.92 0.14 5 IG14_AR7 ActiveIntergenicRegion 0 0.00 4.94 0.00 2.78 21.14 0.00 37.94 9.30 4.20 50.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.37 0.04 6 IG14_SR5 SilentIntergenicRegion 0 0.26 2.21 0.09 1.51 5.91 0.16 13.19 3.59 1.52 19.20 0.00 0.00 0.00 0.07 0.00 0.00 0.00 0.50 0.00 0.00 0.00 0.50 0.08 7 IG14_AR6 ActiveIntergenicRegion 0 0.00 1.95 0.01 1.36 6.36 0.00 5.28 9.25 3.11 23.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 0.00 0.00 0.00 0.61 0.00 8 ER1a ExonRegion 0 19.15 20.91 17.37 10.10 36.32 23.38 70.84 19.07 3.81 31.47 8.70 0.00 4.65 8.26 8.21 24.42 5.43 80.82 14.41 65.92 1.71 3.43 13.29 9 E1_Da NovelBoundary 0 2.82 6.71 12.45 6.33 4.33 2.90 5.74 15.94 6.97 15.98 0.00 0.00 0.00 0.00 6.30 0.00 0.00 22.59 0.00 21.09 2.29 0.00 0.00 10 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.78 0.00 0.00 0.00 0.00 0.00 11 E1a_E3a NovelJunction 0 2.89 0.00 1.83 1.63 3.90 0.00 4.37 5.63 0.00 4.54 10.53 0.00 20.13 3.00 0.00 7.86 12.81 4.19 0.00 3.26 3.15 0.00 4.35 12 I1 Intron 0 1.82 9.35 11.80 6.13 8.84 1.84 14.84 20.72 5.29 24.06 1.11 0.00 0.00 2.31 6.23 6.40 3.32 35.37 11.90 36.37 1.27 0.60 5.91 13 I1_SR1 SilentIntronRegion 0 1.83 9.38 11.84 6.14 8.87 1.85 14.89 20.78 5.30 24.13 1.11 0.00 0.00 2.31 6.25 6.41 3.33 35.46 11.92 36.47 1.27 0.60 5.92 14 E2_Aa NovelBoundary 0 19.93 45.39 91.63 76.41 98.98 10.45 150.06 108.93 29.14 117.01 9.63 0.00 6.82 2.35 5.19 19.82 17.48 103.18 30.87 167.72 8.77 0.00 16.22 15 ER2a ExonRegion 0 17.45 62.72 85.49 62.34 67.67 20.24 128.07 109.00 28.17 95.68 5.99 0.81 12.15 5.81 16.96 23.42 12.48 124.23 39.91 187.20 1.56 5.57 15.86 16 E2_Da NovelBoundary 0 13.78 76.96 82.67 49.98 116.21 15.28 147.99 89.34 21.79 80.85 6.95 0.00 7.47 2.12 4.45 17.09 9.54 127.18 24.28 129.69 2.35 5.45 24.58 17 E2a_E3a KnownJunction 0 9.33 19.73 54.08 21.21 59.85 2.56 59.75 58.45 10.16 40.67 11.63 0.00 6.66 0.00 14.09 7.18 4.77 90.99 8.66 78.11 0.00 9.37 3.67 18 E3_Aa NovelBoundary 0 43.86 110.05 91.13 82.57 106.28 19.70 71.76 90.12 38.40 90.31 2.63 0.00 7.95 4.59 10.38 20.93 12.53 207.18 28.05 156.79 6.05 3.12 34.32 19 ER3a ExonRegion 0 18.70 50.75 66.47 61.95 44.88 22.60 96.48 133.48 29.20 102.16 13.43 1.58 8.89 18.66 27.70 38.56 33.27 207.86 46.48 197.04 5.61 15.02 32.81 20 E3_Da NovelBoundary 0 36.67 73.41 47.22 28.80 65.45 7.27 49.59 56.44 16.41 42.63 7.37 0.00 6.49 6.89 15.58 11.02 4.77 44.36 31.53 97.67 0.00 3.12 4.35 21 E3a_E4a KnownJunction 0 3.41 17.30 18.86 24.47 27.25 13.57 70.53 38.08 18.78 51.98 7.16 0.00 0.00 16.42 15.95 22.99 20.66 55.55 12.33 47.43 3.09 5.27 15.62 22 E3a_E7a NovelJunction 0 8.22 17.04 59.08 33.26 12.56 6.76 42.97 57.75 17.30 68.87 0.00 0.00 0.00 2.18 0.00 9.48 3.46 38.34 13.93 68.58 0.00 0.00 9.48 23 E4_Aa NovelBoundary 0 10.59 97.81 88.32 67.89 102.72 25.72 217.02 124.08 30.24 104.47 9.21 0.00 14.45 11.95 4.82 24.27 4.77 159.14 30.68 143.30 2.78 3.06 8.11 24 ER4a ExonRegion 0 18.56 66.50 79.00 80.08 81.60 30.86 127.91 107.70 40.32 103.68 17.36 3.43 10.82 24.90 17.71 31.66 30.51 156.63 39.29 158.84 10.27 11.18 23.85 25 E4_Da NovelBoundary 0 40.97 112.15 167.71 169.48 60.02 58.72 191.22 136.41 86.52 171.97 10.27 12.60 26.95 27.25 45.24 28.37 24.87 261.57 29.55 215.59 7.91 20.57 31.67 26 E4a_E6a KnownJunction 0 10.00 12.43 3.31 17.98 15.79 13.46 25.04 11.05 19.42 19.82 7.74 0.00 0.00 7.00 0.00 0.00 4.39 45.18 13.74 29.40 11.98 6.25 0.00 27 I4 Intron 0 18.45 43.89 27.36 19.60 31.48 4.73 41.35 33.47 8.88 28.79 0.90 0.28 3.49 1.47 5.61 3.90 2.10 14.95 9.03 37.73 0.37 1.94 2.49 28 I4_SR1 SilentIntronRegion 0 7.00 10.56 0.00 0.00 15.16 7.79 31.89 0.00 0.00 0.00 1.83 0.00 1.82 1.26 5.80 4.21 6.24 2.62 4.51 21.10 0.00 0.00 1.39 29 I4_SR2 SilentIntronRegion 0 19.80 47.68 30.35 21.77 33.46 4.48 42.75 37.13 9.86 31.97 0.82 0.31 3.70 1.51 5.65 3.89 1.71 16.31 9.56 39.78 0.41 2.15 2.60 30 E5_Aa NovelBoundary 0 7.26 42.82 14.13 2.06 20.03 8.18 22.08 12.61 4.08 27.53 11.74 0.00 0.00 7.18 4.45 20.59 4.68 47.67 17.51 44.74 15.20 3.06 11.61 31 ER5a ExonRegion 0 33.92 48.65 13.98 11.84 14.43 30.73 24.51 18.53 13.21 21.37 8.35 0.00 5.43 11.76 11.79 28.15 29.21 25.82 26.71 46.15 15.73 8.93 7.43 32 E5_Da NovelBoundary 0 7.04 9.60 20.22 3.60 16.04 2.90 7.73 23.04 5.90 24.10 0.00 0.00 0.00 2.47 4.45 15.12 0.00 49.21 4.14 21.60 3.15 2.88 3.93 33 E5a_E6a KnownJunction 0 0.00 11.12 3.67 0.00 0.00 0.00 0.00 2.55 6.71 7.41 10.06 0.00 0.00 0.00 0.00 0.00 9.35 0.00 0.00 6.33 15.07 2.76 0.00 34 I5 Intron 0 12.42 23.30 17.43 18.30 23.67 4.41 27.80 26.64 13.01 19.56 0.90 0.51 3.14 1.53 5.55 6.29 4.26 14.95 6.53 34.85 1.38 2.81 6.51 35 I5_SR1 SilentIntronRegion 0 11.45 16.19 16.74 12.74 16.97 4.23 21.17 22.55 10.65 17.55 0.67 0.12 1.06 1.85 5.22 6.86 2.84 16.25 6.59 24.34 1.37 1.51 6.27 36 I5_AR1 ActiveIntronRegion 0 9.43 13.75 25.53 24.65 39.05 4.23 39.05 33.63 13.86 24.15 0.30 0.00 3.69 2.14 4.27 2.28 0.51 8.34 4.40 32.02 0.34 0.00 2.71 37 I5_SR2 SilentIntronRegion 0 13.10 27.08 16.98 20.00 25.00 4.50 29.48 27.68 13.89 19.97 1.06 0.71 3.94 1.34 5.80 6.42 5.19 15.04 6.70 39.40 1.48 3.60 6.96 38 E6_Aa NovelBoundary 0 13.85 55.12 12.18 12.45 7.64 11.02 46.55 19.30 3.12 15.37 2.68 0.00 0.00 0.00 4.45 0.00 8.98 7.75 9.22 47.43 3.03 0.00 11.61 39 ER6a ExonRegion 0 25.33 72.26 20.69 31.45 31.33 30.47 54.73 44.46 48.40 68.86 27.46 0.00 20.94 35.69 15.08 43.72 46.71 90.60 29.72 127.88 20.86 30.17 20.46 40 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER7a ExonRegion 0 13.58 85.27 33.49 35.67 52.73 71.57 93.32 54.86 74.84 85.29 25.85 2.67 19.28 26.84 13.95 39.60 42.08 112.86 41.41 147.11 22.79 26.18 24.32 42 E7_Da NovelBoundary 0 17.48 11.38 7.84 15.15 4.24 5.11 32.99 6.33 6.31 2.98 5.11 0.00 6.82 2.30 0.00 7.18 0.00 10.61 0.00 31.58 3.15 2.88 12.89 43 E7a_E8a KnownJunction 0 10.96 116.62 28.56 15.68 55.86 34.47 36.92 40.62 66.17 74.52 23.01 6.30 13.64 44.50 10.01 38.02 35.16 82.12 16.19 111.47 3.15 36.13 12.55 44 E8_Aa NovelBoundary 0 6.96 5.39 15.55 3.76 23.01 0.00 23.54 13.10 9.66 6.77 0.00 0.00 6.82 2.47 4.45 0.00 0.00 4.68 0.00 8.95 3.15 5.02 0.00 45 ER8a ExonRegion 0 62.19 87.30 38.85 52.51 115.06 91.05 118.35 88.69 75.54 115.20 26.30 17.15 62.21 25.71 26.70 39.34 43.50 54.53 34.90 135.80 8.30 42.12 21.82 46 E8_Da KnownBoundary 0 102.83 136.88 55.70 99.72 217.40 59.23 153.95 92.62 90.02 131.95 12.21 40.66 40.42 25.78 22.25 22.99 26.83 27.07 37.27 92.04 0.00 40.11 28.08 47 ER8b ExonRegion 0 28.15 50.93 11.83 28.84 91.78 24.14 61.39 23.11 21.83 36.94 5.35 14.50 24.00 13.22 26.92 11.96 11.67 9.97 11.85 34.34 0.00 13.86 13.80 48 IG13_AR1 ActiveIntergenicRegion 0 81.71 147.93 57.96 59.97 137.78 72.34 112.37 87.97 57.88 90.63 8.38 7.28 42.78 17.84 31.85 17.72 12.84 19.64 20.85 73.38 2.86 32.38 8.81