Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF793 Gene 0 30.53 108.20 56.03 78.14 84.65 73.82 75.44 78.37 54.29 80.42 11.17 9.79 27.96 7.95 13.24 17.81 13.28 49.87 46.66 71.11 8.58 8.22 11.60 2 322299 Transcript 0 8.87 64.34 19.18 33.01 37.91 36.33 34.54 44.64 33.60 39.31 10.04 0.00 2.64 2.27 3.23 7.12 2.46 50.76 22.88 74.00 2.90 3.71 2.02 3 445217 Transcript 0 13.98 46.33 20.59 30.21 30.54 28.25 31.52 31.73 21.42 30.92 4.67 4.61 11.52 3.59 6.14 7.71 5.85 19.03 17.29 32.03 3.91 3.51 5.54 4 IG41_AR2 ActiveIntergenicRegion 0 20.88 39.83 24.39 24.35 35.33 23.38 30.75 31.28 19.00 42.55 4.69 5.76 12.48 7.44 9.58 13.98 3.51 7.97 10.15 35.52 2.68 12.02 6.24 5 IG41_AR3 ActiveIntergenicRegion 0 8.51 20.87 40.82 22.24 26.85 13.89 18.92 18.96 12.74 12.60 0.43 0.00 2.57 0.60 1.37 0.00 0.00 6.57 19.92 24.70 1.47 5.58 0.66 6 IG41_AR4 ActiveIntergenicRegion 0 2.54 6.10 4.34 2.39 12.37 0.00 4.64 3.09 1.09 1.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.11 15.14 4.73 0.00 1.08 0.00 7 IG41_AR5 ActiveIntergenicRegion 0 5.22 14.64 16.53 6.68 25.86 26.77 33.49 7.95 8.71 9.84 0.00 0.89 0.00 1.12 1.51 1.22 0.68 6.42 20.31 18.81 1.81 0.86 0.00 8 IG41_SR5 SilentIntergenicRegion 0 3.44 10.15 4.70 6.90 7.49 10.73 11.26 7.45 6.55 6.86 3.19 0.62 0.08 0.00 0.28 1.21 1.01 16.75 7.29 22.33 1.12 1.06 0.30 9 IG41_AR6 ActiveIntergenicRegion 0 2.18 7.19 13.78 5.82 3.35 0.41 4.29 3.37 4.69 5.70 2.73 1.84 1.56 0.00 0.70 1.53 3.40 13.46 12.26 19.41 1.14 0.00 0.00 10 ER1a ExonRegion 0 6.58 26.00 3.37 4.14 8.89 6.94 9.03 0.99 2.12 4.30 0.00 0.00 2.51 0.00 0.00 2.97 0.00 4.62 3.30 16.57 0.08 0.00 0.10 11 I1 Intron 0 7.90 20.45 10.83 11.33 17.24 16.36 21.64 8.40 9.55 9.40 1.44 0.00 0.76 1.22 0.56 3.50 1.95 17.08 13.52 18.64 1.04 0.33 1.38 12 I1_AR1 ActiveIntronRegion 0 17.67 57.80 12.24 13.12 43.55 52.93 47.07 8.12 8.46 11.91 8.60 0.00 0.00 0.85 1.27 5.16 4.62 32.61 53.28 48.46 2.81 0.00 1.87 13 I1_AR2 ActiveIntronRegion 0 2.41 23.20 12.62 15.98 27.01 35.58 33.16 20.13 14.23 23.05 1.79 0.00 2.10 0.00 0.58 6.61 1.31 41.54 24.58 33.78 0.00 0.00 1.67 14 I1_AR3 ActiveIntronRegion 0 8.20 16.77 12.72 11.19 14.12 11.02 19.81 6.57 10.01 6.17 0.94 0.00 0.63 1.63 0.64 2.90 2.02 13.58 9.60 15.68 0.97 0.17 1.67 15 I1_SR3 SilentIntronRegion 0 7.87 18.50 5.80 6.23 16.67 10.91 20.58 3.95 10.45 7.28 0.00 0.00 0.00 1.56 0.00 2.26 0.57 4.52 3.85 8.59 2.52 2.38 2.24 16 E2_Aa NovelBoundary 0 16.37 21.51 9.31 7.09 29.88 5.51 7.99 7.80 12.85 12.09 0.00 0.00 0.00 0.00 0.00 0.00 4.02 15.96 12.89 17.07 0.00 0.00 4.18 17 ER2a ExonRegion 0 11.10 46.27 23.83 47.14 26.60 30.03 27.77 43.63 44.53 56.29 14.91 0.00 2.33 2.20 4.63 6.16 3.25 88.04 44.92 117.04 5.49 3.70 5.26 18 E2_Da NovelBoundary 0 6.82 5.92 1.45 3.83 0.00 2.61 10.69 4.15 3.50 5.88 0.00 0.00 0.00 0.00 0.00 0.00 3.55 1.66 19.86 12.14 0.00 0.00 3.76 19 E2a_E3a KnownJunction 0 0.00 24.27 12.86 26.87 48.47 4.66 18.06 42.51 33.04 55.15 9.69 0.00 0.00 4.36 8.90 18.29 8.60 65.99 29.74 58.48 2.53 8.63 0.00 20 E2a_E4a NovelJunction 0 3.78 32.82 15.67 47.35 24.28 30.21 22.35 31.96 36.81 39.89 12.90 6.30 6.82 0.00 0.00 8.03 0.00 79.38 38.87 86.99 8.22 0.00 0.00 21 ER3a ExonRegion 0 3.46 38.50 13.28 28.02 31.45 54.22 44.36 43.77 37.59 45.27 15.12 0.00 1.42 2.92 2.99 3.76 2.51 47.04 14.17 57.48 4.19 4.01 3.60 22 E3_Da NovelBoundary 0 0.00 2.50 7.86 0.00 0.00 7.10 2.21 2.09 0.00 6.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.21 0.00 3.26 0.00 0.00 0.00 23 E3a_E4a KnownJunction 0 6.67 53.08 9.22 31.43 62.65 61.67 19.96 54.79 25.78 27.26 4.42 0.00 0.00 2.41 4.45 4.36 4.77 40.79 13.37 45.51 3.15 6.00 0.00 24 ER4a ExonRegion 0 18.96 144.95 31.66 53.47 53.61 64.72 73.11 77.21 57.13 61.67 17.28 0.00 8.21 3.84 4.88 10.45 0.57 83.72 45.69 122.62 2.47 4.60 3.59 25 E4a_E5b KnownJunction 0 24.23 181.68 59.25 73.05 71.65 68.43 84.04 94.22 68.60 64.52 18.90 0.00 6.66 2.47 0.00 10.94 0.00 75.86 31.81 174.30 5.31 2.76 3.59 26 ER5a ExonRegion 0 3.88 29.15 7.35 12.95 8.92 12.53 16.99 17.00 12.76 11.09 3.22 0.00 0.78 0.54 0.97 1.49 0.00 14.17 5.84 26.24 0.73 0.35 0.49 27 ER5b ExonRegion 0 18.57 150.16 44.81 79.85 51.99 63.85 80.43 104.38 68.30 73.12 19.11 4.13 1.49 5.46 1.12 10.47 1.05 92.18 40.98 123.07 5.61 2.23 0.67 28 E5a_E6a KnownJunction 0 23.19 154.51 35.54 81.28 66.04 58.77 91.33 103.42 62.30 62.91 11.79 0.00 0.00 9.36 8.90 11.19 0.00 91.90 36.61 118.31 9.02 5.88 0.00 29 ER6a ExonRegion 0 22.03 106.47 47.31 69.36 52.21 59.33 71.24 95.81 68.81 87.16 17.26 2.32 8.31 3.95 4.25 11.40 9.64 114.85 65.44 136.61 5.66 3.94 1.97 30 E6a_E7a KnownJunction 0 13.85 126.75 69.69 82.64 72.75 87.00 64.21 98.37 80.47 95.60 19.95 6.30 6.82 7.24 4.45 15.12 18.14 121.33 111.16 152.57 6.12 3.12 3.67 31 ER7a ExonRegion 0 4.83 131.27 48.59 54.08 49.92 61.34 54.01 73.32 49.02 63.96 16.25 0.72 11.77 9.61 5.47 13.28 10.66 81.84 61.88 98.43 10.79 4.02 3.64 32 E7_Da NovelBoundary 0 14.22 38.15 24.63 25.80 29.63 4.77 29.28 42.55 32.38 66.56 2.58 0.00 6.82 7.24 14.59 4.36 0.00 50.49 9.51 38.22 2.29 5.82 0.00 33 E7a_E8a KnownJunction 0 6.52 139.05 31.37 32.93 56.45 56.62 27.07 53.85 23.81 40.78 6.90 0.00 0.00 0.00 0.00 4.36 4.68 34.28 29.84 56.95 0.00 0.00 0.00 34 I7 Intron 0 13.11 54.56 25.38 36.86 32.17 21.44 40.56 34.54 22.57 40.11 7.76 2.37 16.70 2.11 2.91 5.48 2.89 37.72 21.94 45.76 2.59 2.58 1.51 35 I7_SR1 SilentIntronRegion 0 9.90 47.27 14.36 31.48 28.38 7.58 36.30 27.27 16.00 29.85 8.66 2.83 0.00 0.92 0.86 2.39 0.49 37.94 16.08 35.30 4.22 2.62 0.00 36 I7_AR1 ActiveIntronRegion 0 11.31 58.88 26.51 41.11 41.04 22.37 51.89 41.30 26.46 48.65 8.70 1.21 11.30 3.02 3.68 6.19 1.92 33.39 30.90 58.47 3.91 3.30 0.00 37 I7_SR2 SilentIntronRegion 0 13.56 54.46 25.90 36.65 31.22 22.14 39.31 34.08 22.44 39.59 7.60 2.51 18.42 2.06 2.93 5.56 3.17 38.35 21.08 44.68 2.33 2.48 1.80 38 E8_Aa NovelBoundary 0 16.23 121.03 33.14 58.63 48.64 21.24 128.78 47.24 31.92 48.11 7.84 7.05 5.84 2.47 0.00 0.00 0.00 12.15 13.93 47.75 3.15 6.00 0.00 39 ER8a ExonRegion 0 20.88 151.09 74.22 103.11 116.62 114.35 91.96 100.92 74.47 116.62 13.02 4.03 25.13 5.19 5.27 17.18 9.83 103.02 78.21 95.18 6.49 4.80 4.38 40 E8_Da KnownBoundary 0 23.86 113.20 85.45 87.20 124.87 47.25 81.57 78.70 58.82 88.32 12.48 0.00 18.83 10.54 5.32 18.54 9.26 72.34 58.73 78.55 5.13 5.88 3.93 41 E8a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER8b ExonRegion 0 33.31 101.70 53.50 75.30 80.71 70.83 76.56 75.18 51.51 76.80 10.80 13.83 33.77 10.22 17.45 21.65 17.54 42.91 46.02 65.60 11.00 10.19 16.12 43 E8_Ab KnownBoundary 0 34.45 170.89 70.02 90.56 85.57 68.88 74.19 43.33 67.13 75.08 11.69 6.15 13.47 2.47 8.90 0.00 0.00 5.84 26.92 22.82 0.00 5.63 0.00 44 ER8c ExonRegion 0 39.14 116.16 71.46 91.73 109.36 68.70 71.52 84.41 53.41 80.86 8.03 0.83 17.31 1.60 5.70 5.27 0.76 13.13 22.85 52.84 0.38 4.54 1.01 45 ER8d ExonRegion 0 4.76 8.13 0.92 2.39 2.01 1.38 0.99 3.02 0.00 4.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.26 0.00 0.00 0.00