Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF829 Gene 0 5.75 18.94 13.69 27.59 20.07 13.39 30.39 15.96 13.39 27.96 13.24 12.63 10.39 8.30 8.44 14.81 15.60 22.09 14.33 26.37 3.37 7.54 5.40 2 330692 Transcript 0 3.91 8.49 6.43 10.12 13.14 12.43 15.50 8.38 8.37 13.41 10.99 4.16 5.25 4.88 6.16 11.48 11.42 21.58 11.41 18.55 8.12 6.23 5.83 3 391711 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ER1a ExonRegion 0 1.16 3.18 0.48 2.25 3.01 8.74 3.28 2.00 3.48 6.15 4.69 0.00 1.48 2.06 4.03 5.00 6.23 9.90 2.96 7.52 1.17 2.71 4.34 5 E1_Da NovelBoundary 0 9.11 34.34 2.45 13.15 29.37 26.01 38.64 7.97 5.99 9.03 5.05 0.00 0.00 2.47 0.00 21.36 0.00 40.00 30.31 23.71 5.13 5.88 21.94 6 E1a_E2a KnownJunction 0 2.82 3.35 2.81 0.00 10.70 8.12 8.61 1.85 4.40 5.24 11.48 0.00 0.00 4.94 6.30 7.95 8.42 25.70 13.74 17.26 11.43 8.57 8.62 7 ER2a ExonRegion 0 4.03 5.80 3.59 4.45 14.29 18.74 10.04 12.39 10.57 10.01 13.81 0.00 7.32 3.72 5.59 17.18 15.38 34.21 16.94 17.33 18.33 4.78 5.37 8 E2_Ab KnownBoundary 0 6.52 14.67 6.65 13.42 21.14 23.28 12.59 25.10 17.59 21.89 8.00 0.00 12.99 4.83 9.64 26.83 17.02 64.21 19.01 26.08 22.43 2.27 8.71 9 ER2b ExonRegion 0 0.84 8.03 9.53 19.69 22.23 31.63 14.66 18.44 16.09 18.68 14.13 0.00 1.97 8.44 5.16 16.37 13.00 51.19 28.79 39.85 6.45 3.45 6.78 10 E2_Da NovelBoundary 0 0.00 3.16 0.00 3.13 4.33 7.44 6.71 2.22 2.37 1.53 0.00 0.00 0.00 0.00 0.00 3.67 4.11 4.81 4.52 20.52 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 0.00 21.38 17.62 30.30 3.57 12.72 26.32 16.27 11.28 23.67 9.95 0.00 6.49 17.13 11.37 26.23 8.51 80.67 27.67 57.85 11.37 6.00 0.00 12 ER3a ExonRegion 0 8.83 26.58 12.08 29.14 13.19 22.48 34.33 18.83 12.07 28.99 18.73 5.37 9.78 8.74 8.75 21.83 25.21 84.87 18.01 44.35 21.35 8.15 12.10 13 E3a_E4a KnownJunction 0 2.74 21.90 13.63 21.98 15.20 0.00 14.49 22.80 8.01 26.51 7.84 7.05 18.99 7.30 4.45 10.08 34.88 43.57 30.49 24.42 11.37 10.84 0.00 14 E4_Aa NovelBoundary 0 3.33 5.85 13.28 16.22 6.79 16.75 12.76 2.42 7.96 7.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.75 0.00 14.64 0.00 0.00 0.00 15 ER4a ExonRegion 0 4.87 25.83 19.57 38.00 22.71 10.84 36.98 33.63 21.28 39.72 17.02 4.60 13.59 12.72 11.65 18.30 27.42 43.60 37.20 27.27 8.59 9.65 3.86 16 E4_Da NovelBoundary 0 3.41 12.56 6.62 24.11 7.81 26.63 11.00 7.60 22.11 8.73 0.00 0.00 6.82 2.41 0.00 3.67 0.00 21.93 7.81 8.50 0.00 0.00 0.00 17 E4a_E5a KnownJunction 0 3.70 34.07 11.71 44.38 7.89 7.33 20.67 25.96 6.28 51.49 5.16 11.10 6.66 11.95 4.45 18.80 19.73 33.78 17.04 18.41 6.30 8.27 3.33 18 E5_Aa NovelBoundary 0 3.78 14.54 8.96 13.82 8.40 28.73 2.03 3.61 11.95 6.07 0.00 0.00 0.00 0.00 0.00 0.00 4.77 20.81 4.52 8.95 0.00 0.00 0.00 19 ER5a ExonRegion 0 5.49 27.07 13.03 35.25 18.45 10.85 26.31 18.58 12.17 37.25 20.80 10.28 17.29 9.85 7.37 19.85 28.71 29.99 22.00 18.35 7.05 9.92 6.97 20 E5_Da NovelBoundary 0 3.04 14.60 9.37 19.18 12.56 16.41 4.24 2.55 16.44 11.58 0.00 0.00 0.00 0.00 0.00 7.01 0.00 10.16 4.80 14.32 0.00 0.00 3.76 21 E5a_E6a KnownJunction 0 11.19 24.14 4.88 16.98 8.15 7.61 14.31 13.43 2.98 27.78 11.85 0.00 6.49 16.60 21.51 25.12 21.79 22.84 12.52 8.88 0.00 8.63 4.27 22 I5_AR1 ActiveIntronRegion 0 3.41 8.58 3.63 17.38 11.62 12.06 12.16 6.39 13.70 9.33 0.48 0.00 1.92 0.00 0.76 1.84 0.82 5.25 5.93 9.50 0.27 1.03 2.19 23 I5 Intron 0 6.81 25.78 8.81 16.44 7.83 17.44 12.14 13.94 33.11 14.25 1.60 2.17 3.59 2.99 1.22 1.88 1.61 8.51 8.70 27.91 0.21 2.34 4.30 24 I5_SR1 SilentIntronRegion 0 7.19 28.43 10.69 19.32 8.24 18.23 13.60 15.00 33.85 14.54 1.41 1.86 3.66 2.67 1.26 1.90 1.87 7.60 8.48 29.49 0.28 2.36 3.97 25 I5_AR1 ActiveIntronRegion 0 5.55 16.72 2.34 6.49 6.44 14.79 7.13 10.36 30.81 13.34 2.28 3.30 3.40 4.12 1.09 1.84 0.73 11.75 9.54 22.62 0.00 2.29 5.46 26 E6_Aa NovelBoundary 0 0.00 2.63 0.00 3.43 4.33 2.78 11.31 9.90 16.67 5.45 0.00 5.40 6.82 0.00 0.00 0.00 0.00 0.00 4.71 12.59 0.00 0.00 0.00 27 ER6a ExonRegion 0 6.02 24.42 10.95 31.88 24.53 9.33 32.36 16.09 14.97 33.45 13.61 25.68 13.19 11.30 12.72 16.05 13.42 15.18 14.60 22.78 0.46 7.93 6.25 28 E6_Da KnownBoundary 0 10.00 16.77 22.47 42.69 46.52 7.38 38.77 16.02 14.38 34.79 10.06 51.02 6.82 17.25 5.19 15.30 13.37 13.18 8.38 40.33 0.00 11.45 4.01 29 ER6b ExonRegion 0 7.62 21.63 18.83 33.79 24.55 14.10 40.07 17.26 15.05 32.25 14.00 16.66 12.18 8.79 8.72 15.79 15.65 16.49 12.02 32.09 1.54 8.87 4.98