Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC25A42 Gene 0 34.62 16.69 54.12 23.39 21.92 24.24 16.71 45.95 34.09 35.98 67.42 10.57 24.10 53.83 47.99 53.02 27.25 33.76 21.17 15.84 44.97 17.89 26.90 2 318596 Transcript 0 17.65 8.72 26.81 11.00 10.48 16.48 7.16 23.36 19.24 17.85 32.11 9.27 13.89 25.72 26.72 22.86 13.40 16.73 8.70 9.21 21.15 8.54 12.73 3 454460 Transcript 0 2.90 0.71 12.51 2.09 0.00 0.68 3.17 5.29 4.54 2.09 0.06 0.09 2.99 1.22 3.60 4.25 1.22 3.11 3.27 2.67 2.31 0.03 1.02 4 IG28_AR2 ActiveIntergenicRegion 0 7.83 8.31 15.85 6.46 4.40 4.35 3.87 6.33 3.71 10.24 3.57 0.35 5.36 2.80 10.91 6.01 7.38 19.45 4.19 17.76 3.43 1.01 3.30 5 ER1a ExonRegion 0 3.69 1.39 1.11 0.00 1.17 7.52 0.58 1.64 3.09 1.52 5.58 3.63 9.42 6.08 5.55 6.30 3.50 2.70 1.39 0.56 3.58 0.21 2.59 6 E1a_E2b KnownJunction 0 0.00 3.35 8.43 1.43 0.00 11.07 0.00 9.24 11.05 8.03 11.69 12.30 6.33 9.65 15.20 0.00 4.77 5.93 0.00 8.95 5.62 2.63 0.00 7 I1_AR3 ActiveIntronRegion 0 17.67 2.75 14.84 7.46 11.36 1.77 7.15 10.14 7.70 6.34 2.78 2.01 3.46 0.98 7.18 14.76 2.58 6.86 2.74 12.47 0.99 0.00 1.55 8 I1_AR4 ActiveIntronRegion 0 12.22 3.81 14.34 5.77 9.77 4.31 7.04 12.07 4.88 7.41 0.97 2.04 1.78 2.29 6.14 11.55 4.03 6.62 4.67 9.48 0.51 0.00 1.22 9 I1_AR5 ActiveIntronRegion 0 38.19 4.89 17.71 4.98 5.10 3.35 9.71 9.58 9.02 7.47 2.64 3.41 15.32 1.64 6.63 11.28 4.02 10.66 4.15 10.59 4.10 0.00 3.22 10 I1_SR5 SilentIntronRegion 0 13.64 3.89 9.45 3.49 4.04 1.75 5.19 8.00 5.18 4.23 2.15 2.28 6.50 0.91 6.33 8.92 2.60 8.31 3.52 9.64 2.61 0.15 2.53 11 ER2a ExonRegion 0 2.90 0.71 12.51 2.09 0.00 0.68 3.17 5.29 4.54 2.09 0.06 0.09 2.99 1.22 3.60 4.25 1.22 3.11 3.27 2.67 2.31 0.03 1.02 12 E2_Ab KnownBoundary 0 0.00 0.00 9.52 1.63 0.00 0.00 0.00 4.19 1.42 4.67 0.00 0.00 0.00 5.47 8.90 7.52 4.39 0.00 0.00 3.26 0.00 0.00 0.00 13 ER2b ExonRegion 0 3.84 1.48 21.94 7.02 4.25 1.24 0.85 23.82 15.56 23.46 51.36 5.85 7.49 29.06 25.04 30.92 12.97 15.66 13.47 15.01 22.56 7.16 5.90 14 E2a_E3a KnownJunction 0 6.67 14.73 24.48 10.92 4.33 0.00 2.25 25.92 26.19 25.12 40.64 0.00 0.00 30.37 43.64 86.13 21.97 21.27 8.00 24.99 18.41 5.69 11.69 15 E3_Aa NovelBoundary 0 3.19 0.00 12.80 5.76 0.00 5.45 0.00 8.05 8.97 8.30 7.16 0.00 0.00 2.47 0.00 3.25 17.02 10.36 0.00 12.27 5.56 0.00 7.26 16 ER3a ExonRegion 0 9.42 13.93 40.48 10.59 8.91 7.82 15.58 34.88 27.78 35.76 62.07 12.62 31.10 52.51 38.84 54.31 17.78 30.77 10.55 10.84 35.65 5.43 9.81 17 E3_Da NovelBoundary 0 7.26 0.00 11.15 7.92 3.57 0.00 0.00 3.45 6.92 3.36 0.00 7.05 0.00 0.00 0.00 8.03 3.55 17.24 0.00 3.26 2.72 0.00 3.76 18 E3a_E4a KnownJunction 0 3.70 5.59 24.87 9.42 24.53 30.44 46.68 27.68 32.06 27.67 68.91 31.81 25.97 79.58 36.71 28.45 13.00 29.72 22.97 14.64 37.50 8.51 15.19 19 E4a_E5a KnownJunction 1 17.71 6.12 23.48 19.74 27.67 71.95 26.98 28.34 34.52 18.08 105.50 18.61 6.66 41.62 49.57 40.33 54.14 32.71 36.80 22.24 34.84 12.19 0.00 20 ER4a ExonRegion 0 11.15 5.16 28.37 14.94 21.71 47.89 36.00 34.37 42.56 27.17 99.62 25.31 24.89 68.59 41.51 37.72 41.26 43.35 36.51 21.11 39.67 10.34 7.57 21 E5_Aa NovelBoundary 0 0.00 0.00 17.71 4.63 0.00 0.00 2.25 4.07 3.33 3.92 4.95 0.00 0.00 2.47 4.45 7.43 4.77 0.00 4.80 2.81 0.00 5.45 0.00 22 ER5a ExonRegion 0 9.96 11.88 35.52 15.30 14.10 21.73 9.59 33.54 27.38 25.64 76.36 10.81 46.76 63.04 46.09 60.40 43.60 39.84 23.40 15.52 34.56 16.43 8.07 23 E5a_E6a KnownJunction 0 10.22 12.50 23.06 20.38 7.64 12.38 18.59 24.07 21.04 33.63 54.80 11.70 5.84 66.51 26.95 55.63 31.51 22.18 39.25 5.88 24.83 31.90 10.67 24 I5 Intron 0 1.28 0.74 5.53 1.23 4.21 2.22 2.25 3.74 4.68 5.59 1.64 1.39 1.87 1.50 2.27 1.80 0.80 3.00 1.54 2.32 7.47 2.78 12.81 25 I5_SR2 SilentIntronRegion 0 0.00 0.00 1.02 0.00 0.00 1.99 0.00 0.00 1.54 5.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.52 15.66 26 I5_AR2 ActiveIntronRegion 0 1.33 0.77 5.72 1.28 4.38 2.25 2.33 3.89 4.82 5.66 1.70 1.44 1.95 1.56 2.36 1.87 0.83 3.12 1.60 2.41 7.68 2.87 12.85 27 ER6a ExonRegion 0 5.84 8.71 25.07 11.49 11.37 8.53 15.19 22.77 17.26 20.32 46.59 11.25 19.68 53.32 37.22 38.00 17.72 14.01 18.08 15.26 28.20 17.43 12.42 28 E6_Da NovelBoundary 0 13.93 0.00 24.27 9.09 8.49 5.51 3.89 18.32 5.53 10.29 6.42 0.00 6.82 6.71 18.42 15.64 4.58 21.39 13.55 11.89 17.73 3.06 20.83 29 E6a_E7a KnownJunction 0 6.00 9.60 20.76 18.61 16.13 12.32 31.18 25.51 19.91 33.17 76.60 17.41 27.60 72.11 65.52 41.53 22.81 27.90 12.99 5.24 28.60 22.84 23.22 30 I6 Intron 0 14.29 8.10 13.60 7.21 9.27 7.30 7.80 14.27 9.24 9.18 9.21 3.15 8.17 14.88 11.32 18.52 7.72 12.17 11.86 6.26 11.26 4.33 6.87 31 I6_AR1 ActiveIntronRegion 0 10.26 6.31 14.16 6.30 4.67 6.05 6.68 19.98 9.99 12.93 8.25 2.77 9.31 12.86 11.75 20.16 4.48 16.56 9.88 7.84 15.38 4.44 5.13 32 I6_SR1 SilentIntronRegion 0 13.34 8.16 0.00 1.16 19.93 7.36 9.10 4.43 2.11 0.98 8.86 4.52 4.43 11.44 7.04 15.33 7.57 4.73 5.48 2.44 3.79 3.58 10.10 33 I6_AR2 ActiveIntronRegion 0 19.29 10.15 18.23 10.58 10.45 8.76 8.62 11.74 11.18 8.16 10.49 3.10 8.38 18.58 12.56 18.05 11.46 10.17 16.59 6.00 9.57 4.52 7.65 34 E7_Aa NovelBoundary 0 17.41 15.72 31.96 16.98 7.47 18.57 18.55 23.33 17.33 5.32 7.05 0.00 12.82 21.01 0.00 22.56 9.54 18.70 9.51 15.08 11.18 0.00 23.65 35 ER7a ExonRegion 0 28.25 10.57 35.78 20.30 15.72 29.79 18.89 41.88 27.73 41.82 73.35 13.59 31.07 69.41 35.44 68.42 31.64 32.15 41.16 18.39 50.41 17.38 22.89 36 E7_Da NovelBoundary 0 36.30 5.99 26.67 7.29 8.66 2.73 6.32 16.39 16.00 7.84 7.26 0.00 0.00 14.24 0.00 19.82 4.39 6.34 0.00 15.53 19.95 0.00 3.16 37 E7a_E8a KnownJunction 0 6.22 9.80 16.11 16.71 4.07 21.92 12.06 21.85 24.31 15.23 49.75 5.85 47.72 33.67 22.25 26.75 18.51 8.42 3.48 4.99 38.86 14.27 23.39 38 I7 Intron 0 17.75 10.17 13.17 5.79 8.62 4.98 7.33 10.54 7.78 6.08 8.50 5.19 11.55 9.52 7.39 14.26 4.32 11.00 5.13 5.50 4.07 2.31 3.55 39 I7_SR1 SilentIntronRegion 0 17.78 10.18 13.19 5.80 8.63 4.99 7.34 10.56 7.79 6.09 8.51 5.19 11.57 9.53 7.40 14.28 4.33 11.02 5.14 5.50 4.07 2.31 3.55 40 ER8a ExonRegion 0 15.56 15.56 33.74 10.79 8.19 15.49 10.12 26.40 19.76 27.18 52.62 7.70 17.65 43.73 34.44 36.94 18.28 21.39 9.47 13.76 41.98 11.37 24.70 41 E8_Da KnownBoundary 0 34.45 24.80 64.46 10.95 15.28 16.24 12.41 63.66 39.38 40.00 58.54 6.30 20.78 47.91 45.99 41.95 13.65 44.23 17.98 39.37 49.61 11.27 31.67 42 ER8b ExonRegion 0 49.25 21.42 70.89 31.57 30.28 30.86 20.89 59.20 43.57 44.00 79.06 11.87 25.91 61.41 59.41 62.28 31.93 41.55 24.73 18.13 54.25 22.78 35.62