Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF30 Gene 0 37.39 45.46 29.77 36.37 36.78 13.46 20.77 23.09 33.37 22.98 14.55 4.74 8.33 3.00 6.75 1.55 14.73 30.76 20.64 44.14 5.72 4.86 8.45 2 439785 Transcript 0 2.10 7.12 4.31 7.28 6.92 5.49 3.73 1.72 12.52 2.85 3.26 5.32 0.69 0.41 2.99 2.43 2.07 6.93 11.67 15.21 4.88 0.00 2.01 3 426813 Transcript 0 14.22 14.09 15.88 13.34 13.25 5.86 8.10 5.03 12.71 14.18 10.55 6.42 12.14 1.10 10.00 0.00 8.22 26.60 16.34 34.76 2.06 0.00 6.25 4 303586 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 342559 Transcript 0 27.34 12.17 3.90 9.86 15.62 2.27 4.86 3.08 2.14 0.99 4.05 0.00 6.49 0.00 0.00 0.00 6.83 4.85 10.26 16.94 2.29 4.53 0.00 6 ER1a ExonRegion 0 3.44 7.86 5.87 3.86 3.21 5.29 4.09 1.67 7.43 6.97 4.86 0.00 0.04 1.10 0.72 0.48 10.05 18.84 10.29 10.08 4.15 0.92 0.48 7 E1_Da KnownBoundary 0 0.00 0.00 1.83 6.66 0.00 6.64 0.00 0.00 5.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.78 0.00 2.68 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 0.00 6.38 8.25 8.86 4.33 8.57 6.05 0.00 6.16 15.18 2.42 0.00 0.00 0.00 0.00 0.00 8.70 22.97 9.60 13.36 3.03 7.90 0.00 9 ER1b ExonRegion 0 0.00 0.80 0.61 4.44 0.00 3.58 4.53 0.00 5.48 0.05 0.00 0.00 2.77 0.00 0.00 0.00 0.15 5.63 0.39 2.00 4.01 0.00 0.00 10 E1b_E2a KnownJunction 0 0.00 6.71 0.00 1.43 0.00 0.00 4.50 0.00 3.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 3.15 0.00 0.00 11 E2_Aa NovelBoundary 0 10.67 0.00 8.63 21.34 17.74 0.00 9.85 4.15 7.96 2.58 0.00 5.70 0.00 0.00 0.00 4.36 4.30 2.57 4.80 9.08 0.00 0.00 0.00 12 ER2a ExonRegion 0 3.74 15.88 10.93 20.91 9.31 6.33 13.46 4.43 20.08 16.75 10.56 4.98 0.39 1.27 0.00 2.48 22.52 29.79 33.64 29.35 9.15 4.77 3.86 13 E2_Da NovelBoundary 0 0.00 18.68 15.55 14.62 7.47 0.00 8.04 0.00 3.44 4.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 9.22 9.14 0.00 0.00 0.00 14 E2a_E3a KnownJunction 0 6.37 11.51 12.92 21.58 12.99 6.93 3.97 7.56 17.04 11.79 14.37 0.00 0.00 4.77 0.00 8.03 12.81 29.89 34.82 33.17 8.46 0.00 3.16 15 ER3a ExonRegion 0 14.69 29.41 20.26 30.39 20.20 6.00 15.66 7.18 24.34 13.31 17.43 0.80 5.31 2.64 5.69 1.12 9.36 36.10 26.75 35.58 9.05 3.52 4.06 16 E3a_E4a KnownJunction 0 3.11 8.75 8.37 9.29 16.30 10.56 2.25 2.55 17.04 3.60 6.74 12.60 0.00 0.00 4.70 3.76 4.02 7.63 22.40 29.59 6.30 0.00 4.35 17 E3a_E4b KnownJunction 0 20.89 21.64 5.71 21.94 4.33 8.57 8.39 7.02 14.87 11.47 12.58 0.00 0.00 0.00 4.70 0.00 3.83 17.78 29.46 8.82 0.00 0.00 4.35 18 ER4a ExonRegion 0 5.29 12.20 8.27 13.97 11.37 7.79 3.64 4.32 24.39 7.74 6.28 8.66 0.00 1.62 7.25 5.94 4.13 12.01 23.89 29.26 6.06 0.00 3.67 19 ER4b ExonRegion 0 13.50 17.62 16.37 25.52 19.63 11.39 11.44 11.39 34.60 17.98 12.43 6.02 6.07 3.18 4.67 4.04 11.99 29.58 30.21 44.82 10.11 0.86 5.19 20 E4a_E5a KnownJunction 0 9.11 3.35 5.38 7.36 7.30 2.21 7.68 2.18 7.03 14.61 14.95 0.00 0.00 0.00 8.90 0.00 4.39 36.98 16.85 26.46 2.29 0.00 8.37 21 E4a_E6a KnownJunction 0 11.19 3.35 1.21 20.54 8.66 2.61 6.18 10.19 16.81 11.66 0.00 0.00 0.00 2.12 0.00 0.00 8.60 8.66 9.32 5.82 5.99 5.88 0.00 22 E5_Aa NovelBoundary 0 18.97 36.18 5.12 18.01 27.59 2.90 10.73 8.63 11.17 21.79 5.26 0.00 0.00 0.00 0.00 0.00 0.00 6.30 13.55 10.87 0.00 2.76 7.34 23 ER5a ExonRegion 0 22.73 24.50 25.17 15.15 20.47 5.48 9.25 6.78 14.28 15.41 9.42 6.66 9.15 3.31 9.97 0.00 7.47 34.65 23.13 47.53 1.54 0.00 6.02 24 E5_Da NovelBoundary 0 23.93 11.58 12.74 6.56 3.57 2.61 0.00 9.04 12.21 10.07 7.90 0.00 20.29 0.00 5.32 0.00 0.00 3.73 7.15 13.49 0.00 0.00 0.00 25 E5a_E6a KnownJunction 0 10.82 14.41 17.09 17.51 11.97 9.88 7.38 6.12 16.81 12.52 7.26 12.60 27.27 0.00 11.13 0.00 12.81 8.17 9.04 30.30 2.35 0.00 4.35 26 I5 Intron 0 14.31 19.73 5.10 9.85 11.40 1.89 4.28 6.06 4.33 4.02 2.27 0.00 2.84 0.20 0.95 0.00 1.46 2.43 2.81 8.13 0.97 0.92 3.02 27 I5_AR1 ActiveIntronRegion 0 14.39 19.84 5.13 9.91 11.47 1.90 4.31 6.10 4.35 4.04 2.29 0.00 2.85 0.20 0.96 0.00 1.46 2.45 2.83 8.18 0.98 0.92 3.04 28 E6_Aa NovelBoundary 0 28.08 37.89 9.37 26.54 11.80 0.00 7.95 8.71 5.87 6.77 0.00 6.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.44 0.00 0.00 0.00 29 ER6a ExonRegion 0 45.04 56.28 24.90 36.32 40.51 16.17 25.14 28.05 38.68 28.84 17.91 5.54 14.80 3.16 8.87 0.63 17.10 25.91 17.29 47.00 4.73 4.41 8.99 30 E6_Ab KnownBoundary 0 51.79 55.45 23.62 37.42 48.98 18.00 43.59 42.80 42.45 33.50 28.27 12.60 0.00 2.47 4.45 0.00 7.95 25.00 50.07 63.60 8.03 11.27 4.35 31 ER6b ExonRegion 0 51.13 61.34 40.66 48.36 50.79 15.83 24.65 32.30 51.50 24.33 15.72 3.74 5.59 3.72 2.91 1.26 21.08 60.98 32.32 56.09 10.58 6.62 9.80 32 E6_Da KnownBoundary 0 190.55 262.39 158.36 335.89 226.06 142.36 156.78 169.35 208.33 250.57 93.02 131.44 156.32 44.26 16.81 41.36 135.20 140.07 109.56 257.01 34.29 64.11 63.60 33 E6a_E6c KnownJunction 0 27.34 12.17 3.90 9.86 15.62 2.27 4.86 3.08 2.14 0.99 4.05 0.00 6.49 0.00 0.00 0.00 6.83 4.85 10.26 16.94 2.29 4.53 0.00 34 ER6c ExonRegion 0 64.69 84.36 60.23 63.09 59.31 25.41 33.74 43.68 49.14 23.83 23.90 5.70 10.59 2.98 2.66 1.08 24.66 60.89 27.84 68.64 4.67 8.51 19.00 35 E6_Ac KnownBoundary 0 39.27 78.80 64.19 61.80 32.26 35.72 22.13 47.97 49.22 22.30 21.58 19.51 6.17 2.47 0.00 0.00 21.69 47.80 29.93 52.99 5.62 5.51 16.30 36 ER6d ExonRegion 0 56.50 63.68 44.22 48.13 57.46 19.62 28.67 30.23 40.95 31.55 18.33 7.68 10.86 4.64 9.40 3.09 17.47 34.58 24.73 60.77 5.48 6.40 12.47 37 E6_Db KnownBoundary 0 43.79 59.79 31.93 56.87 25.21 0.00 30.69 46.87 48.00 30.84 17.74 0.00 13.15 2.47 0.00 0.00 8.51 14.01 8.75 55.80 5.31 8.63 12.55 38 ER6e ExonRegion 0 33.12 37.42 29.55 44.21 29.65 8.28 18.91 29.90 30.17 23.12 11.61 4.12 7.91 1.48 10.96 0.88 8.04 9.13 9.50 33.87 2.99 7.20 8.66