Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 THAP8 Gene 0 15.14 12.62 35.11 19.12 11.89 24.19 10.62 25.77 24.12 26.87 16.64 8.93 8.33 23.32 31.13 26.74 20.85 37.98 33.76 21.95 19.60 9.61 22.89 2 292894 Transcript 0 1.34 0.97 1.56 0.85 1.40 2.01 0.94 2.33 0.68 1.53 1.81 0.00 0.45 1.29 4.01 5.65 1.51 2.18 4.02 1.50 1.53 0.79 2.33 3 392182 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.72 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.37 0.00 0.00 5 ER1b ExonRegion 0 1.10 0.00 1.56 0.68 0.00 0.00 0.44 2.59 1.85 4.01 1.65 0.00 0.00 1.80 0.69 3.28 2.78 0.98 2.56 0.71 1.44 0.00 0.00 6 E1_Da KnownBoundary 0 3.78 0.00 3.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 3.59 4.11 0.00 12.05 0.00 0.00 0.00 0.00 7 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1c ExonRegion 0 0.38 0.00 1.37 0.81 0.00 0.53 0.55 2.05 0.63 1.14 0.12 0.00 0.00 0.61 0.00 6.76 1.01 2.86 2.04 0.85 1.39 0.00 0.28 9 E1_Ac KnownBoundary 0 0.00 2.96 3.67 0.00 0.00 2.90 4.50 0.00 1.24 1.53 0.00 0.00 0.00 4.94 0.00 0.00 4.77 0.00 0.00 0.00 3.15 0.00 0.00 10 ER1d ExonRegion 0 7.91 6.09 11.52 6.13 5.89 21.24 7.36 7.28 8.34 9.77 3.73 2.31 1.92 6.13 16.04 12.96 8.26 19.45 21.34 8.91 10.22 4.93 15.98 11 E1b_E2a KnownJunction 0 0.00 8.95 23.15 17.28 3.74 2.56 0.00 13.55 13.69 15.93 19.85 25.06 0.00 9.36 22.87 26.57 22.44 28.11 26.45 8.95 14.15 3.12 12.89 12 E1b_E3a NovelJunction 0 0.00 0.00 4.38 1.30 0.00 0.00 0.00 1.77 5.38 13.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.56 13.84 3.26 0.00 0.00 0.00 13 Ix Intron 0 6.21 2.42 3.04 2.26 2.12 0.44 4.20 1.43 1.31 3.93 7.82 6.41 4.42 6.57 7.93 9.67 5.76 4.66 1.01 5.23 0.17 0.00 1.63 14 Ix_SR1 SilentIntronRegion 0 6.22 2.42 3.05 2.26 2.13 0.44 4.21 1.43 1.32 3.94 7.83 6.42 4.43 6.58 7.94 9.68 5.77 4.67 1.01 5.24 0.18 0.00 1.63 15 E2_Aa NovelBoundary 0 3.78 0.00 1.21 3.10 0.00 4.32 0.00 0.00 0.00 1.42 0.00 0.00 0.00 9.95 11.00 3.85 14.12 3.73 0.00 8.12 0.00 0.00 7.60 16 ER2a ExonRegion 0 3.30 3.87 30.01 12.42 6.13 14.92 5.65 21.76 25.02 23.57 30.24 11.87 6.27 25.08 42.86 29.29 28.60 57.54 33.88 25.55 19.55 10.39 22.70 17 E2a_E3a KnownJunction 0 9.71 6.45 44.97 16.41 11.54 48.49 7.60 20.66 39.44 31.59 18.90 17.86 0.00 19.42 33.25 16.24 15.99 40.58 47.53 17.90 17.79 8.94 18.27 18 Ix Intron 0 2.40 0.00 2.90 0.46 0.61 1.25 3.00 2.92 0.42 3.49 5.26 0.98 0.88 7.62 10.68 6.06 3.76 8.74 1.44 9.16 0.50 0.00 0.00 19 Ix_SR1 SilentIntronRegion 0 2.42 0.00 2.92 0.46 0.61 1.26 3.03 2.94 0.42 3.52 5.30 0.99 0.88 7.69 10.77 6.12 3.79 8.82 1.46 9.25 0.50 0.00 0.00 20 E3_Aa NovelBoundary 0 2.82 0.00 4.38 3.63 0.00 5.11 0.00 9.57 1.07 3.20 0.00 0.00 6.33 9.83 17.80 18.11 8.70 8.95 4.24 11.31 2.66 0.00 0.00 21 ER3a ExonRegion 0 19.30 15.63 48.77 16.70 9.52 32.02 11.60 26.84 29.44 32.93 20.23 10.81 9.13 32.90 41.29 22.61 22.96 52.27 36.96 28.30 27.50 8.09 22.45 22 E3_Da NovelBoundary 0 13.71 0.00 2.84 0.00 0.00 0.00 4.24 0.00 1.71 4.62 2.68 0.00 6.33 2.12 4.45 4.02 4.77 5.26 0.00 5.31 0.00 0.00 0.00 23 E3a_E4a KnownJunction 0 19.78 14.60 67.56 27.77 7.56 46.34 20.89 55.94 31.13 30.81 19.27 12.60 6.82 39.61 26.70 29.31 15.52 62.88 38.78 29.40 19.77 10.53 28.85 24 Ix Intron 0 11.34 4.84 8.85 4.32 6.83 3.90 7.10 8.55 3.91 7.49 8.80 7.05 9.31 11.75 11.15 15.17 11.66 11.05 8.81 13.85 2.34 1.24 4.62 25 Ix_SR1 SilentIntronRegion 0 5.80 3.89 4.54 2.40 5.41 2.75 4.33 7.26 3.49 5.77 8.22 6.76 8.67 9.82 8.86 11.71 9.31 8.28 8.08 9.33 1.93 1.03 3.27 26 Ix_AR1 ActiveIntronRegion 0 22.61 6.79 17.62 8.22 9.73 6.23 12.72 11.19 4.78 11.00 10.01 7.69 10.64 15.70 15.84 22.25 16.46 16.72 10.32 23.04 3.18 1.67 7.37 27 E4_Aa NovelBoundary 0 19.41 6.38 12.83 10.62 3.14 11.24 17.67 8.71 3.41 8.76 12.63 0.00 15.10 12.48 27.44 16.32 16.64 10.28 8.38 21.09 0.00 0.00 0.00 28 ER4a ExonRegion 0 27.45 23.39 57.79 39.35 24.58 35.73 18.51 48.43 40.63 45.68 24.90 14.92 16.18 37.09 44.43 47.40 33.48 50.85 54.37 34.50 28.81 17.77 38.52 29 ER4b ExonRegion 0 3.63 2.91 3.33 1.75 4.20 5.50 2.27 4.94 1.41 3.44 3.59 0.00 1.34 3.25 12.02 10.19 0.94 3.70 10.01 3.65 2.83 2.38 6.71