Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TSHZ3 Gene 0 25.22 95.16 60.01 76.87 28.01 94.90 81.33 65.63 39.74 106.51 0.04 0.00 0.00 0.00 0.00 0.00 0.00 126.02 18.94 55.46 300.39 573.76 268.28 2 240587 Transcript 0 9.10 38.80 22.69 27.56 10.01 45.00 30.56 27.22 15.07 48.02 0.10 0.00 0.00 0.00 0.00 0.00 0.00 51.28 10.13 22.98 153.24 265.11 130.24 3 ER1a ExonRegion 0 0.29 3.04 0.87 0.30 0.00 11.14 2.84 2.10 0.92 4.55 0.28 0.00 0.00 0.00 0.00 0.00 0.00 6.90 1.13 4.03 53.55 35.52 27.52 4 E1a_E2a KnownJunction 0 0.00 11.58 2.93 0.00 0.00 22.94 1.85 9.36 1.77 25.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.35 9.04 5.75 88.03 147.33 77.60 5 I1_AR3 ActiveIntronRegion 0 3.19 17.42 7.61 21.48 3.84 2.33 15.28 7.07 6.51 13.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 6.07 8.62 8.48 3.71 22.43 6 I1_AR4 ActiveIntronRegion 0 4.45 17.47 9.31 18.23 4.35 2.71 20.73 12.05 7.08 15.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.67 2.48 9.86 4.69 6.44 19.08 7 I1_SR5 SilentIntronRegion 0 2.47 15.53 11.53 19.60 4.26 5.03 28.40 12.05 8.05 13.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.68 4.25 12.51 8.71 8.06 29.45 8 I1_AR5 ActiveIntronRegion 0 4.93 16.21 24.53 20.89 4.82 3.24 20.28 13.10 7.51 23.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.96 4.52 14.52 12.96 6.31 52.50 9 I1_SR6 SilentIntronRegion 0 16.68 31.04 27.29 34.42 8.61 6.59 24.85 18.61 6.42 21.09 0.00 0.13 0.00 0.00 0.00 0.00 0.00 15.10 6.37 8.39 10.85 8.23 47.45 10 I1_AR6 ActiveIntronRegion 0 26.32 68.79 58.66 77.57 15.05 12.35 49.89 37.94 11.58 32.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.17 5.89 14.49 11.26 10.95 60.43 11 I1_SR7 SilentIntronRegion 0 14.97 82.41 32.80 50.19 6.13 12.93 20.59 25.25 6.10 27.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.47 11.11 7.34 0.56 5.79 30.30 12 I1_AR7 ActiveIntronRegion 0 17.64 111.17 58.00 96.54 19.18 23.84 54.06 47.24 12.35 42.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.02 3.19 8.51 6.61 10.42 32.79 13 I1_SR8 SilentIntronRegion 0 11.23 88.33 71.82 105.05 27.92 16.62 55.03 50.74 14.84 48.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.89 3.49 14.62 8.10 31.92 66.83 14 I1_AR8 ActiveIntronRegion 0 40.20 71.64 63.30 87.76 12.47 6.65 41.25 34.38 13.84 39.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46.43 11.62 10.91 20.97 15.83 70.73 15 I1_SR9 SilentIntronRegion 0 9.31 79.49 24.98 51.25 7.45 4.03 24.13 19.86 8.46 21.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.30 9.38 12.08 14.02 6.15 59.56 16 I1_AR9 ActiveIntronRegion 0 5.71 69.48 28.42 52.43 7.72 8.10 33.17 26.73 9.07 26.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20.34 4.38 14.59 13.01 7.12 42.09 17 I1_SR10 SilentIntronRegion 0 1.91 14.25 8.60 19.05 3.33 5.29 19.61 9.22 5.18 13.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.70 5.16 12.33 13.60 6.28 43.16 18 ER2a ExonRegion 0 27.01 101.79 64.26 82.38 30.03 100.93 86.98 70.20 42.53 113.85 0.02 0.00 0.00 0.00 0.00 0.00 0.00 134.59 20.22 59.16 318.16 612.50 285.60 19 IG8_AR21 ActiveIntergenicRegion 0 4.14 2.70 1.23 1.46 0.00 17.33 5.79 1.24 1.95 5.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.65 3.57 1.62 5.39 38.62 15.95 20 IG8_AR20 ActiveIntergenicRegion 0 1.16 3.12 2.52 3.80 0.81 14.82 10.34 0.49 1.46 6.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.59 1.49 0.32 1.71 30.64 14.37 21 IG8_SR17 SilentIntergenicRegion 0 1.27 2.84 1.31 3.67 1.78 14.38 8.99 2.70 1.70 8.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.58 3.20 0.57 5.77 24.39 13.27 22 IG8_AR19 ActiveIntergenicRegion 0 1.63 0.59 1.25 2.77 0.26 8.20 5.77 4.28 0.23 2.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 3.03 0.00 3.04 20.20 9.12 23 IG8_AR6 ActiveIntergenicRegion 0 39.57 400.74 84.14 51.63 3.83 32.33 27.40 2.08 4.30 1.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.94 11.98 42.61 0.40 5.05 3.69 24 IG8_AR5 ActiveIntergenicRegion 0 30.42 200.93 73.10 53.33 5.64 69.84 39.74 1.99 9.19 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58.75 7.57 52.13 0.44 8.14 5.50 25 IG8_SR5 SilentIntergenicRegion 0 10.16 121.89 24.22 15.28 2.71 37.23 27.19 0.50 4.07 1.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.36 4.13 28.59 0.64 4.33 2.21 26 IG8_AR4 ActiveIntergenicRegion 0 9.99 92.96 19.73 21.81 2.97 41.41 24.75 0.71 7.20 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 106.36 15.45 53.35 1.22 9.79 4.82