Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF14 Gene 0 34.07 42.04 26.02 31.59 39.58 29.35 37.66 22.59 16.78 27.90 14.23 24.39 21.99 11.51 16.22 14.60 17.92 23.55 21.45 33.27 5.39 10.60 9.84 2 379428 Transcript 0 4.59 7.23 13.39 16.83 6.80 5.62 10.15 5.40 4.53 7.92 0.89 11.84 19.91 2.74 6.28 6.96 3.98 11.65 6.08 9.25 3.09 1.67 6.01 3 344099 Transcript 0 32.88 41.06 33.92 26.60 49.20 45.08 53.07 26.39 21.76 32.37 21.18 24.99 26.95 15.93 9.83 15.64 28.25 36.05 19.19 44.88 10.32 9.35 8.09 4 ER1a ExonRegion 0 24.10 37.80 13.99 10.89 26.94 36.97 40.66 9.56 13.63 14.60 18.82 0.11 1.28 5.78 6.54 16.41 20.65 49.61 19.19 42.24 10.93 4.06 7.63 5 E1_Da KnownBoundary 0 0.00 0.00 1.69 0.00 0.00 0.00 0.00 0.00 3.15 1.61 2.47 0.00 0.00 0.00 0.00 0.00 4.39 1.62 0.00 3.00 5.50 0.00 0.00 6 E1a_E3a KnownJunction 1 10.52 9.01 3.49 3.03 3.48 5.34 5.21 3.57 11.98 14.69 29.22 0.00 0.00 2.47 0.00 0.00 34.60 8.37 4.80 18.47 12.36 0.00 0.00 7 ER1b ExonRegion 0 3.04 2.73 8.30 7.02 5.53 2.38 6.99 3.09 2.57 3.09 1.51 1.79 5.85 2.10 4.53 4.50 5.92 8.67 9.07 8.30 1.86 1.10 4.23 8 E1_Db NovelBoundary 1 352.36 329.15 2798.87 2380.28 364.52 185.57 360.28 2288.85 2185.22 1877.30 107.50 77.73 213.95 103.66 134.37 232.67 326.88 2566.50 239.16 388.81 155.49 176.90 225.36 9 E1b_E2a KnownJunction 1 7.26 11.97 28.59 35.96 7.89 12.89 16.12 10.72 7.73 17.14 0.00 30.01 46.75 2.41 4.94 12.90 4.58 19.52 4.71 12.40 5.62 3.00 8.37 10 E2_Aa NovelBoundary 0 466.01 471.03 1557.51 1114.08 449.92 266.10 447.41 1105.59 1098.34 826.68 202.63 199.26 142.36 79.35 177.39 513.46 354.74 1656.89 405.00 396.54 242.11 202.32 411.79 11 ER2a ExonRegion 0 3.46 6.98 3.28 7.52 6.98 1.60 7.34 2.38 3.31 3.53 1.16 3.71 7.13 3.71 9.38 3.47 1.43 6.75 4.45 7.06 1.80 0.91 5.44 12 I2_AR1 ActiveIntronRegion 0 11.16 8.83 4.09 9.45 2.87 2.41 14.21 0.00 2.02 1.96 2.42 2.23 8.14 0.18 1.28 0.16 4.00 0.00 0.00 7.13 0.00 0.33 4.61 13 E3_Aa NovelBoundary 0 30.23 24.54 32.08 28.04 3.65 22.37 13.29 17.33 10.10 3.33 0.00 0.00 8.28 0.00 4.45 8.37 4.68 24.04 32.57 14.64 2.72 0.00 0.00 14 ER3a ExonRegion 0 34.91 40.22 40.42 26.47 27.28 18.96 31.34 31.77 28.42 31.15 24.29 12.10 19.65 16.28 9.91 19.82 33.76 59.99 23.28 59.89 15.88 10.43 12.97 15 E3_Da NovelBoundary 0 13.34 18.81 22.65 18.01 8.66 9.09 16.56 12.28 8.36 6.50 0.00 0.00 0.00 0.00 0.00 4.19 4.02 3.69 23.62 19.49 0.00 0.00 0.00 16 E3a_E4a KnownJunction 0 32.38 40.52 50.80 23.14 27.76 33.39 32.11 18.94 23.58 30.38 14.53 18.46 41.23 17.25 8.90 15.72 30.48 51.90 12.89 43.40 11.61 3.12 0.00 17 I3 Intron 0 12.91 5.95 9.36 14.87 4.57 1.79 7.43 11.34 4.94 3.75 1.41 3.67 6.60 0.72 0.50 2.18 5.64 3.36 7.77 7.27 1.08 0.00 0.00 18 I3_SR1 SilentIntronRegion 0 13.04 6.01 9.44 15.00 4.61 1.81 7.50 11.45 4.99 3.79 1.43 3.70 6.66 0.73 0.50 2.20 5.69 3.39 7.85 7.34 1.09 0.00 0.00 19 E4_Aa NovelBoundary 0 16.97 15.19 16.06 30.87 26.66 2.61 7.15 16.06 6.45 8.89 5.16 0.00 6.01 0.00 0.00 0.00 0.00 6.76 8.28 23.84 2.35 2.33 0.00 20 ER4a ExonRegion 0 37.13 48.84 38.49 24.78 79.04 73.98 68.43 28.19 20.03 32.49 14.86 33.86 38.75 19.60 6.75 15.98 28.84 39.62 14.78 48.31 15.03 7.79 10.11 21 E4_Da NovelBoundary 0 11.26 18.75 16.32 23.41 8.40 5.79 13.20 22.51 1.48 13.43 0.00 0.00 19.15 0.00 0.00 0.00 8.98 9.66 8.47 3.00 0.00 3.00 0.00 22 E4a_E5a KnownJunction 0 24.23 37.03 29.24 30.37 92.11 89.55 120.96 37.91 19.65 38.25 20.90 42.76 27.27 21.96 8.90 19.99 14.31 24.50 26.64 48.58 0.00 16.35 11.78 23 I4_SR2 SilentIntronRegion 0 13.60 14.45 9.72 13.41 22.42 10.18 9.68 8.90 4.77 6.39 0.00 2.09 11.97 1.57 6.50 1.23 0.00 5.97 9.23 7.43 0.00 2.39 1.72 24 E5_Aa NovelBoundary 0 13.48 12.10 9.52 18.18 21.56 8.86 7.99 8.71 6.22 2.34 2.05 6.30 0.00 0.00 0.00 0.00 0.00 2.24 7.62 5.69 0.00 0.00 0.00 25 ER5a ExonRegion 0 58.11 70.73 41.08 51.83 65.50 49.24 60.37 37.94 26.93 47.23 23.29 42.79 34.83 18.04 24.53 22.30 27.50 31.91 32.76 50.60 7.04 18.40 13.67 26 IG43 Intergenic 0 20.55 18.20 15.58 15.48 29.72 7.99 16.23 9.84 7.72 8.84 4.96 7.13 8.44 6.95 12.24 8.45 5.66 13.10 12.59 15.10 1.92 2.13 1.83 27 IG43_AR5 ActiveIntergenicRegion 0 87.85 36.44 34.61 40.07 117.99 20.28 44.54 42.02 32.91 32.76 22.08 20.69 24.72 23.27 66.93 28.28 20.96 14.99 20.19 31.77 3.21 11.84 5.42 28 IG43_SR3 SilentIntergenicRegion 0 46.15 31.13 13.60 20.40 64.37 10.35 29.10 16.69 11.27 15.35 7.63 22.09 12.95 20.65 35.36 18.56 12.73 8.40 13.30 12.46 1.68 3.35 3.89 29 IG43_SR2 SilentIntergenicRegion 0 32.79 18.38 12.38 11.80 56.14 13.02 30.77 14.97 5.35 10.48 6.86 6.00 19.06 21.43 25.12 29.74 6.39 14.84 16.45 7.55 2.13 2.69 2.84 30 IG43_AR1 ActiveIntergenicRegion 0 88.33 35.19 50.44 35.45 156.80 26.72 61.30 35.58 19.00 25.68 30.51 38.15 38.99 41.87 51.17 29.32 26.55 17.17 23.21 21.31 1.67 7.59 4.90