Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ARMC6 Gene 0 35.77 97.79 222.25 95.98 32.14 95.75 45.34 96.87 56.74 134.98 173.65 30.60 27.95 204.83 236.04 158.59 145.40 197.30 86.00 139.40 96.90 50.94 56.75 2 392335 Transcript 0 14.35 20.49 39.40 15.09 9.89 32.18 20.06 18.16 12.33 24.10 34.64 8.28 7.82 59.82 71.64 37.54 37.70 49.14 31.38 25.48 21.55 13.33 17.35 3 269932 Transcript 0 7.27 18.75 30.68 7.27 3.11 39.81 12.30 5.13 1.79 16.09 17.19 0.00 0.00 10.88 24.04 11.33 20.45 4.88 4.51 14.02 14.36 2.41 6.99 4 392336 Transcript 0 0.95 5.68 1.31 1.60 3.69 2.02 0.82 1.79 0.04 2.25 6.67 0.00 5.34 28.06 23.11 12.20 9.90 2.48 0.55 8.88 10.71 0.00 3.65 5 379532 Transcript 0 0.00 0.00 133.79 60.00 0.00 0.00 0.00 58.20 29.77 79.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 100.73 0.00 0.00 0.00 0.00 0.00 6 IG27 Intergenic 0 2.16 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.23 9.05 0.00 3.37 0.00 0.00 6.51 2.25 0.00 3.00 7 IG27_AR1 ActiveIntergenicRegion 0 2.20 0.00 0.00 0.00 0.00 1.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.52 9.24 0.00 3.44 0.00 0.00 6.64 2.29 0.00 3.00 8 ER1a ExonRegion 0 13.10 18.52 19.22 10.51 3.61 16.49 12.34 12.98 8.40 20.28 32.45 1.34 1.60 56.96 55.45 36.38 32.73 39.45 29.64 25.07 27.44 14.50 20.53 9 E1_Ab NovelBoundary 0 9.11 28.88 18.12 20.18 15.62 34.01 17.49 16.22 10.21 33.17 40.64 6.15 0.00 42.91 62.80 59.64 35.53 64.13 3.76 47.87 29.34 12.74 28.43 10 E1_Da NovelBoundary 0 9.11 78.08 58.37 9.06 4.33 181.43 56.53 4.11 8.22 11.36 47.64 0.00 0.00 13.54 56.62 32.64 54.42 27.32 24.00 47.30 22.55 8.27 30.05 11 E1a_E3a KnownJunction 0 21.26 31.77 91.98 32.43 25.81 67.57 41.20 38.20 24.13 47.79 61.23 7.05 20.45 95.06 116.82 63.74 72.46 102.97 59.39 39.88 32.80 25.47 26.80 12 ER1b ExonRegion 0 19.05 58.60 80.43 24.28 21.65 141.70 55.73 34.57 18.08 48.59 74.86 7.87 14.07 102.32 126.34 77.01 88.82 75.25 46.04 57.06 52.29 28.41 46.72 13 ER1c ExonRegion 0 7.65 34.20 31.83 7.45 6.22 68.27 22.87 3.94 1.90 12.77 19.42 0.00 0.00 14.17 28.80 15.15 27.16 5.50 9.02 22.61 20.87 4.82 10.23 14 E1b_E3a KnownJunction 0 6.89 3.29 29.54 7.09 0.00 11.36 1.72 6.33 1.68 19.42 14.95 0.00 0.00 7.59 19.28 7.52 13.74 4.27 0.00 5.43 7.85 0.00 3.76 15 ER2a ExonRegion 0 0.95 5.68 1.31 1.60 3.69 2.02 0.82 1.79 0.04 2.25 6.67 0.00 5.34 28.06 23.11 12.20 9.90 2.48 0.55 8.88 10.71 0.00 3.65 16 ER3a ExonRegion 0 21.08 71.70 230.99 91.88 25.11 73.49 48.86 100.29 56.16 137.86 225.04 47.36 37.07 218.13 209.90 181.51 197.03 228.03 116.03 157.90 111.23 57.00 65.26 17 E3a_E4a KnownJunction 0 43.49 138.33 301.62 106.01 24.62 97.27 54.76 148.65 95.83 240.33 326.24 64.67 51.46 328.98 294.70 346.23 261.71 291.33 140.71 182.74 130.35 62.89 82.03 18 ER4a ExonRegion 0 50.97 97.39 275.10 131.05 39.65 146.33 53.25 154.58 81.55 183.89 296.25 60.14 42.15 279.97 248.88 246.87 235.04 305.26 128.37 177.80 127.50 65.49 76.42 19 E4a_E5a KnownJunction 0 64.31 77.55 306.08 168.74 54.58 233.10 86.87 161.63 93.37 199.85 315.87 59.87 39.12 226.38 228.57 249.34 300.89 371.75 164.05 161.39 129.36 84.38 84.34 20 ER5a ExonRegion 0 41.36 100.92 268.02 139.75 48.30 189.04 71.09 147.77 82.19 195.15 317.32 87.91 58.43 250.00 226.79 225.03 243.32 311.80 151.17 167.80 154.00 71.69 83.07 21 E5_Ac KnownBoundary 0 58.08 144.25 295.61 117.67 39.64 116.18 69.73 132.05 80.79 159.83 277.02 60.02 44.96 334.51 291.12 315.81 240.49 237.11 146.36 201.15 158.95 80.46 79.56 22 ER5b ExonRegion 0 42.95 123.09 265.18 105.66 36.67 116.07 59.11 124.45 75.12 170.55 278.34 86.59 54.35 318.81 275.28 257.53 234.75 235.64 129.66 177.22 145.32 79.91 62.19 23 ER5c ExonRegion 0 40.92 113.20 285.51 99.49 34.78 111.86 56.49 119.84 71.22 162.86 249.99 70.71 46.90 311.29 286.26 260.56 213.46 232.20 106.18 173.76 141.04 70.84 57.75 24 ER5d ExonRegion 0 40.06 149.15 325.61 131.64 48.14 125.60 58.78 134.13 87.66 184.88 245.41 44.34 38.47 287.85 298.65 232.28 200.47 303.25 112.88 202.78 137.90 69.16 73.42 25 E5b_E6a KnownJunction 0 73.72 192.73 533.60 212.76 108.91 205.62 96.41 199.95 112.06 276.46 288.18 41.41 64.93 394.61 524.01 322.91 227.30 349.91 193.32 238.60 150.49 92.77 126.25 26 ER6a ExonRegion 0 44.20 143.76 426.68 169.98 46.64 138.76 70.87 155.93 94.39 213.46 260.94 50.15 64.14 306.24 317.99 243.02 224.34 366.97 130.52 214.52 142.04 71.73 79.69 27 E6a_E7a KnownJunction 0 82.53 158.85 340.26 163.12 45.76 134.30 74.24 162.53 66.46 204.61 225.48 36.91 38.96 295.90 266.27 229.51 149.23 244.12 78.12 195.27 136.22 63.07 71.79 28 E7_Aa NovelBoundary 0 17.56 0.00 10.56 7.16 3.90 2.33 1.68 11.62 1.45 3.92 12.42 0.00 6.82 5.36 0.00 4.36 4.68 15.59 8.28 5.75 0.00 9.31 3.93 29 ER7a ExonRegion 0 54.42 160.67 349.67 139.27 59.35 138.79 70.12 144.92 74.59 184.67 229.81 35.03 48.14 270.26 305.97 190.96 142.36 270.19 104.49 165.63 126.35 58.56 60.76 30 E7a_E8a KnownJunction 0 62.83 132.08 254.96 118.70 37.86 134.30 72.03 124.50 75.46 162.35 163.30 31.51 32.63 220.38 238.58 174.40 118.19 208.05 109.84 131.29 111.63 49.35 47.55 31 ER8a ExonRegion 0 35.55 95.48 202.85 79.01 22.53 90.67 44.98 83.02 45.15 126.73 135.61 21.52 9.11 168.08 214.17 108.59 111.58 98.01 60.73 138.59 78.14 32.20 49.50 32 E8a_E9a KnownJunction 0 62.75 125.70 173.26 103.35 55.26 108.57 41.78 96.98 52.05 130.95 128.35 25.06 6.33 240.69 277.64 127.83 100.05 168.88 51.77 126.17 59.99 61.05 31.07 33 I8 Intron 0 12.24 27.89 39.28 33.28 9.73 13.66 14.56 12.98 7.82 23.06 3.56 1.94 2.71 8.20 11.77 11.46 7.95 28.77 13.68 22.56 7.14 4.84 5.28 34 I8_SR1 SilentIntronRegion 0 12.28 27.98 39.42 33.39 9.76 13.70 14.61 13.02 7.85 23.14 3.57 1.95 2.72 8.22 11.81 11.50 7.98 28.87 13.72 22.63 7.17 4.85 5.29 35 E9_Aa NovelBoundary 0 14.00 37.62 60.14 54.90 0.00 2.78 19.61 8.75 14.29 23.42 4.42 0.00 6.01 13.60 8.90 11.11 12.90 38.80 52.80 29.66 19.21 3.12 0.00 36 ER9a ExonRegion 1 52.26 123.42 193.01 91.10 52.01 123.71 66.06 82.66 50.96 131.81 179.07 21.31 6.13 239.12 305.08 145.18 128.14 191.31 68.53 137.81 88.66 60.32 56.25 37 E9_Da KnownBoundary 1 26.97 65.71 114.28 63.93 28.35 102.38 56.48 46.66 31.77 70.67 102.13 5.55 0.00 65.34 63.66 109.89 65.26 131.24 64.19 85.14 45.65 32.76 48.66 38 E9a_E9b KnownJunction 0 0.00 0.00 129.18 55.90 0.00 0.00 0.00 40.46 33.65 75.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85.81 0.00 0.00 0.00 0.00 0.00 39 E9_Ab KnownBoundary 0 20.67 60.38 148.07 59.67 23.77 50.88 41.91 51.63 27.14 73.68 76.65 0.00 0.00 58.74 37.95 59.30 34.03 112.26 36.90 67.30 27.24 16.72 38.93 40 ER9b ExonRegion 1 54.18 133.81 252.18 115.03 59.40 139.74 85.00 90.92 59.78 142.22 194.84 13.85 0.00 228.03 273.30 168.22 138.64 231.71 84.73 160.42 88.15 50.00 79.88 41 ER9c ExonRegion 0 51.08 100.17 264.25 128.29 36.27 106.15 56.52 105.04 58.14 162.10 158.47 19.87 23.78 237.88 301.92 186.97 149.63 235.63 98.32 151.70 99.16 53.50 65.45 42 E9_Db KnownBoundary 0 26.67 34.34 117.18 40.09 0.00 24.25 19.74 43.66 28.33 66.91 54.75 11.85 0.00 56.80 68.48 78.44 61.52 100.15 42.73 44.81 30.02 24.25 30.39 43 E9b_E9c KnownJunction 0 0.00 0.00 138.40 64.09 0.00 0.00 0.00 75.95 25.90 82.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 115.65 0.00 0.00 0.00 0.00 0.00 44 E9_Ac KnownBoundary 0 17.26 30.26 146.27 114.90 12.90 39.52 4.02 85.84 39.58 99.42 44.96 0.00 29.87 85.41 92.47 58.62 77.89 198.27 53.46 55.99 45.72 15.61 19.89 45 ER9d ExonRegion 0 36.83 71.99 250.71 148.28 16.05 50.98 28.07 126.18 60.27 176.16 117.52 18.18 28.14 228.03 246.61 177.73 167.69 287.14 103.84 117.45 95.20 41.25 67.54 46 ER9e ExonRegion 0 54.62 126.00 227.39 124.51 38.90 125.49 46.71 107.32 55.11 162.76 175.89 26.37 26.14 260.22 335.15 189.41 163.20 222.36 113.20 145.19 109.94 74.76 76.93 47 E9_Dc KnownBoundary 0 82.31 190.16 212.85 104.15 47.03 201.65 64.04 103.59 55.64 169.82 216.58 47.87 13.47 185.77 421.41 225.24 234.50 222.65 131.20 169.06 91.86 41.64 109.52 48 ER9f ExonRegion 0 30.65 61.52 116.30 55.25 18.72 55.04 22.24 67.85 39.00 92.75 112.30 17.81 16.43 126.17 224.35 91.81 98.81 76.57 48.09 101.08 63.43 40.86 41.35 49 ER9g ExonRegion 0 8.68 11.18 6.98 2.32 0.27 12.47 6.62 3.28 4.45 4.24 10.24 16.45 1.41 27.45 42.65 12.48 7.92 4.99 5.10 11.49 4.41 0.00 4.70 50 IG28_AR2 ActiveIntergenicRegion 0 7.83 8.31 15.85 6.46 4.40 4.35 3.87 6.33 3.71 10.24 3.57 0.35 5.36 2.80 10.91 6.01 7.38 19.45 4.19 17.76 3.43 1.01 3.30