Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPI Gene 0 124.25 214.40 324.07 133.85 94.57 143.39 97.63 272.41 228.89 287.73 908.16 325.29 171.88 507.05 558.70 371.00 417.51 397.35 327.10 296.52 247.66 205.23 237.86 2 415930 Transcript 0 5.39 22.49 7.14 1.64 4.15 22.15 7.73 5.05 5.45 5.28 13.43 3.07 0.60 8.57 7.86 5.70 4.55 7.22 17.29 19.25 5.54 1.19 1.50 3 356487 Transcript 0 292.36 130.47 72.28 44.69 106.77 99.81 92.09 92.52 69.28 71.17 184.45 250.76 267.29 352.07 445.58 111.50 138.49 100.53 180.30 138.90 78.21 43.66 97.63 4 414931 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.00 0.00 1.09 0.00 0.00 0.00 0.77 0.00 0.00 0.00 0.00 1.58 5 392234 Transcript 0 5.04 6.85 9.44 7.21 4.98 3.97 7.26 5.98 5.50 6.13 5.33 5.10 5.63 2.91 10.11 9.19 7.38 8.79 9.90 9.07 3.45 1.82 6.14 6 ER1a ExonRegion 0 0.33 5.36 1.16 0.17 0.90 4.27 1.11 0.74 1.19 1.38 5.50 3.50 1.79 2.16 4.30 1.30 1.95 2.10 3.30 5.07 1.78 0.45 0.16 7 E1a_E2d KnownJunction 0 15.85 50.52 16.11 2.80 8.23 62.18 19.83 14.42 15.16 12.95 30.17 0.00 0.00 23.54 14.83 12.22 11.69 15.59 48.57 49.41 14.83 3.12 4.35 8 ER2a ExonRegion 0 14.15 32.62 11.51 0.37 6.08 34.57 24.91 5.55 5.35 8.46 66.85 1.80 3.52 48.93 66.31 22.60 35.90 14.44 47.45 57.58 26.40 11.20 23.25 9 E2_Ab KnownBoundary 1 48.38 89.79 42.84 3.40 16.72 107.49 68.50 24.48 29.28 26.11 144.14 330.11 256.64 230.68 129.43 53.23 79.66 72.88 111.53 132.82 58.13 29.27 48.32 10 E2_Ac KnownBoundary 0 142.54 113.99 45.39 11.05 52.80 334.81 112.13 16.43 19.79 40.08 393.31 69.02 75.48 471.54 709.19 262.41 280.41 46.51 106.17 117.03 123.99 69.26 128.90 11 ER2b ExonRegion 1 101.59 114.06 56.10 12.80 38.62 262.71 119.39 23.30 19.17 38.60 373.97 20.33 29.57 356.53 403.02 186.34 268.95 74.95 125.61 147.36 139.89 65.22 106.36 12 E2_Ad KnownBoundary 1 543.87 408.55 190.97 74.98 216.13 714.99 378.21 148.85 123.75 164.72 1095.70 75.32 58.28 875.98 718.83 554.56 717.16 375.94 593.81 307.19 438.68 242.06 329.16 13 ER2c ExonRegion 1 298.02 266.56 131.54 41.10 138.62 577.65 271.51 84.63 74.82 112.26 927.20 35.97 55.56 861.16 756.67 471.77 600.00 251.79 394.13 237.23 350.98 185.51 260.68 14 ER2d ExonRegion 1 187.68 250.70 277.22 72.56 112.78 343.15 152.07 252.25 191.88 295.09 1103.19 233.72 88.23 548.53 543.26 404.23 568.42 539.67 343.32 439.21 346.69 158.15 249.73 15 E2_Da KnownBoundary 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 2.14 0.00 1.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 2.62 0.00 2.76 0.00 16 E2a_E2e KnownJunction 1 55.64 114.45 504.15 105.41 27.16 86.31 47.92 374.64 288.94 468.28 2154.76 364.77 156.00 1032.20 1067.07 432.79 1047.50 476.05 561.33 649.78 667.32 248.55 228.18 17 ER2e ExonRegion 0 0.42 0.54 1.46 0.32 0.60 0.26 0.60 2.61 2.16 1.14 2.59 0.50 0.11 1.61 2.90 1.84 2.95 2.99 1.86 1.35 1.25 0.46 1.76 18 E2_Ae KnownBoundary 0 3.33 0.00 2.45 0.00 0.00 0.00 0.00 8.17 0.00 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 6.80 0.00 0.00 0.00 0.00 7.51 19 ER2f ExonRegion 1 73.89 133.93 628.29 150.60 44.25 73.07 52.50 490.02 409.58 594.35 2388.86 353.80 170.77 1571.38 1330.26 802.55 1062.93 753.29 813.49 930.58 656.87 414.17 493.17 20 E2_Db NovelBoundary 0 70.09 97.22 397.98 103.78 28.35 51.28 36.39 323.99 269.56 357.83 759.46 267.69 91.39 535.05 649.98 612.15 415.15 579.77 481.61 554.29 273.86 329.37 383.54 21 E2b_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2c_E3a KnownJunction 0 106.17 251.86 697.43 214.99 56.03 114.48 46.02 632.29 496.32 624.38 1473.37 440.24 240.89 1100.42 1467.59 995.21 761.29 1080.81 688.77 889.60 448.01 467.03 642.19 23 ER2g ExonRegion 0 81.13 189.29 621.67 167.07 47.05 101.93 50.31 494.48 438.57 581.48 1402.00 498.61 243.49 1156.64 1410.25 963.46 760.86 841.50 691.22 835.10 451.03 481.12 615.47 24 ER3a ExonRegion 0 41.19 193.74 587.32 191.91 60.17 166.97 75.14 475.89 407.05 538.86 1294.00 411.18 179.24 877.68 1105.85 687.69 676.06 603.56 437.94 716.79 415.07 333.53 447.72 25 E3_Ab KnownBoundary 0 27.04 214.83 623.16 236.73 108.40 298.29 121.54 537.13 427.31 583.25 1469.79 367.92 188.14 741.37 1040.73 608.05 668.26 619.52 426.65 770.07 469.45 306.60 402.83 26 ER3b ExonRegion 0 56.68 236.91 734.46 292.34 177.69 439.88 210.30 619.11 503.46 694.63 1993.42 523.32 258.10 1125.21 1219.98 787.61 896.61 648.68 590.79 874.13 544.73 433.11 447.47 27 E3_Da KnownBoundary 0 3.70 0.00 12.60 0.00 4.07 0.00 0.00 2.55 1.42 1.67 0.00 0.00 0.00 0.00 4.82 0.00 0.00 7.25 0.00 2.62 0.00 0.00 4.10 28 E3a_E3c KnownJunction 0 123.21 307.58 935.57 411.04 310.36 572.00 363.90 794.37 621.55 834.87 2306.85 624.65 338.78 1242.46 1287.60 946.59 1071.62 955.54 799.27 1021.65 579.04 563.84 491.44 29 ER3c ExonRegion 0 7.42 8.18 10.20 6.62 6.33 5.63 10.33 5.11 6.15 5.61 5.15 4.86 6.49 3.22 8.93 10.47 8.74 9.74 10.17 11.05 4.73 2.78 7.86 30 E3_Ac KnownBoundary 0 9.63 2.63 7.60 5.99 3.57 0.00 11.17 2.30 1.07 0.00 0.00 0.00 0.00 2.47 5.19 7.95 4.77 3.94 0.00 6.01 0.00 0.00 0.00 31 ER3d ExonRegion 0 177.20 496.77 923.17 304.62 271.89 719.99 403.47 817.63 712.68 925.85 3346.61 785.93 316.87 1656.30 1567.80 1091.39 1383.27 1247.95 974.16 1077.50 871.30 616.56 600.38 32 E3_Db KnownBoundary 0 7.41 6.18 27.70 13.25 0.00 2.38 10.16 21.40 14.09 7.55 9.27 0.00 0.00 0.00 29.17 4.36 22.16 16.00 13.37 20.52 3.15 3.12 4.35 33 E3b_E5a KnownJunction 0 358.73 694.15 1151.23 339.75 161.97 355.82 247.31 885.02 885.09 1039.15 3414.18 1363.79 443.48 1764.39 1620.50 1333.84 1552.87 1680.23 1165.21 1001.26 943.59 750.48 808.64 34 E3b_E6a KnownJunction 0 0.00 11.58 4.14 1.96 3.31 0.00 2.25 0.00 0.00 1.53 4.63 5.70 0.00 0.00 4.45 3.59 0.00 3.98 0.00 3.26 0.00 0.00 0.00 35 ER3e ExonRegion 0 5.13 7.48 12.75 6.66 7.82 8.17 11.48 9.32 9.19 6.76 8.13 4.44 3.86 3.89 12.72 8.64 12.02 15.42 21.09 13.73 4.47 1.98 7.60 36 E3_Dc NovelBoundary 0 135.43 154.38 55.68 61.50 70.80 43.38 109.35 67.48 54.98 50.02 58.75 6.00 32.63 18.84 21.76 91.26 109.21 93.68 129.04 146.50 30.02 21.49 107.98 37 E3c_E4a KnownJunction 0 3.04 3.22 3.16 10.42 3.31 0.00 1.99 3.94 3.36 9.94 2.37 0.00 6.82 0.00 0.00 7.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E4_Aa NovelBoundary 0 614.11 189.18 218.74 299.16 364.35 117.32 180.01 446.43 286.72 165.17 156.04 30.46 67.53 44.03 134.62 385.37 265.17 527.20 274.27 174.69 65.30 156.21 255.75 39 ER4a ExonRegion 0 9.20 14.81 19.62 12.00 6.85 5.78 11.92 8.93 6.66 7.18 8.40 15.71 10.87 5.80 26.00 17.13 13.22 15.78 16.38 19.23 6.78 3.87 13.48 40 ER5a ExonRegion 0 329.52 459.44 952.80 376.63 123.28 241.84 180.11 819.86 678.11 921.82 3061.04 1139.73 610.04 1729.75 1705.07 1189.06 1488.55 1292.24 998.23 1002.78 791.24 719.16 662.25 41 E5a_E6a KnownJunction 0 544.91 501.62 913.42 502.63 105.69 204.60 119.81 768.78 620.31 889.96 2771.44 1266.71 636.65 1699.34 1504.67 1321.36 1363.91 1344.87 1064.22 914.46 735.03 603.82 759.05 42 ER6a ExonRegion 0 339.16 780.47 1081.00 402.69 256.91 421.80 289.70 863.06 797.83 1011.33 3832.87 1627.38 733.72 2074.87 1678.82 1519.83 1750.15 1713.12 1420.41 1022.50 988.00 788.97 920.39 43 E6a_E7a KnownJunction 0 504.09 780.26 1345.75 482.26 559.00 647.24 523.81 950.78 880.63 1182.52 4041.81 1852.95 764.72 1942.27 1722.98 1774.49 2029.92 1801.07 1497.45 1179.34 1094.82 757.70 1066.19 44 ER7a ExonRegion 0 272.68 558.84 1102.07 394.99 314.40 485.93 319.26 832.51 775.84 1019.18 3236.67 1595.41 908.95 1766.18 1520.70 1343.65 1576.54 1565.33 1003.43 1048.31 891.61 695.09 808.80 45 E7a_E8a KnownJunction 0 287.68 641.07 1126.19 434.18 247.71 467.34 314.79 951.40 846.17 1081.70 3224.71 1999.70 1288.71 1888.35 1634.59 1701.78 1588.68 1889.53 1144.32 1146.74 909.24 814.83 941.13 46 ER8a ExonRegion 0 232.02 637.59 1461.54 549.21 237.67 475.48 299.39 1130.06 950.68 1289.07 3767.61 1805.00 963.85 2254.64 2193.86 2092.31 1759.23 1978.28 1862.59 1282.97 1026.68 1224.14 1354.25 47 E8a_E9a KnownJunction 0 308.87 906.22 1541.81 544.89 343.72 623.50 442.82 1112.08 900.60 1235.17 4370.26 1786.18 811.47 2659.50 2143.52 2227.19 1975.59 1704.81 2370.14 1626.44 1177.85 1729.36 1613.70 48 E8a_E10a NovelJunction 0 0.00 5.85 0.00 0.00 0.00 0.00 0.00 0.00 1.36 1.32 2.68 0.00 0.00 0.00 0.00 3.67 0.00 0.00 13.55 0.00 0.00 0.00 0.00 49 I8_AR2 ActiveIntronRegion 0 23.28 14.24 18.73 13.82 13.38 19.12 20.43 22.22 30.35 8.03 33.69 8.04 4.69 16.94 50.15 65.81 58.94 62.82 39.59 12.77 16.37 4.17 32.30 50 ER9a ExonRegion 0 332.88 776.56 1458.62 489.93 330.65 536.62 389.61 1148.33 988.37 1352.48 5075.00 1564.94 779.41 2335.12 1996.38 1519.64 2218.45 1563.13 1597.28 1366.03 1393.52 1003.29 1069.10 51 E9_Da NovelBoundary 0 25.71 26.71 45.68 21.58 32.60 16.18 18.99 40.54 52.20 58.56 39.59 49.82 32.63 26.37 31.89 77.76 39.74 100.07 59.20 59.83 26.19 19.41 99.36 52 E9a_E10a KnownJunction 0 366.66 798.94 1368.34 455.25 349.24 527.14 346.32 1016.25 962.84 1239.01 4303.41 1483.98 639.57 1990.77 1830.28 1298.04 1884.24 1316.14 1026.01 1127.24 1311.41 622.87 803.10 53 I9 Intron 0 16.06 27.79 32.86 24.56 20.62 17.90 20.06 38.51 51.28 35.20 36.98 31.54 14.77 36.93 34.08 44.68 39.13 98.78 44.06 53.74 34.01 19.66 77.73 54 I9_AR1 ActiveIntronRegion 0 12.71 12.75 25.02 17.75 10.12 12.19 16.25 20.81 37.17 31.09 25.99 26.44 7.90 28.90 33.48 36.23 31.54 75.93 35.66 48.17 31.25 15.91 51.59 55 I9_SR1 SilentIntronRegion 0 10.37 18.54 22.50 16.33 10.56 13.65 18.66 24.63 30.02 29.45 24.54 7.85 3.77 30.20 29.50 38.40 30.78 74.79 32.49 41.44 32.80 15.00 57.15 56 I9_AR2 ActiveIntronRegion 0 18.05 34.62 42.69 29.18 22.15 18.91 20.74 45.21 58.17 41.42 33.93 29.59 13.81 33.89 46.45 43.55 42.91 106.76 45.43 62.17 32.10 17.75 76.97 57 I9_AR3 ActiveIntronRegion 0 22.48 37.84 42.39 32.06 35.86 26.65 25.18 50.46 59.00 37.15 38.57 44.09 23.70 39.35 33.00 51.97 50.48 109.80 50.14 57.21 40.43 16.63 95.67 58 I9_SR3 SilentIntronRegion 0 6.84 23.25 36.09 29.21 17.66 10.51 13.89 39.00 49.05 31.71 39.62 27.18 5.48 41.52 28.33 47.21 44.67 83.01 57.57 49.99 31.11 17.47 73.22 59 I9_AR4 ActiveIntronRegion 0 10.64 20.63 24.55 24.29 17.03 17.28 16.59 28.89 42.87 26.27 37.02 27.83 11.84 39.56 28.15 40.56 32.33 84.72 43.29 46.83 30.54 17.13 79.58 60 I9_SR4 SilentIntronRegion 0 19.02 24.86 29.52 20.56 22.09 15.18 23.84 34.98 48.44 31.06 42.27 51.54 26.49 40.13 21.33 54.57 34.86 102.92 53.14 49.26 37.40 26.94 83.07 61 I9_AR5 ActiveIntronRegion 0 10.00 20.80 13.99 16.86 14.13 13.94 20.86 35.83 55.01 30.96 50.93 38.95 13.70 47.80 19.24 45.72 41.62 105.41 46.07 57.81 39.51 18.05 84.17 62 I9_AR9 ActiveIntronRegion 0 20.79 29.96 24.83 11.89 13.14 16.62 13.00 46.68 68.49 50.67 60.97 9.72 10.39 44.07 32.07 43.21 27.42 127.14 22.25 42.19 32.47 58.25 84.87 63 E10_Aa NovelBoundary 0 36.52 58.94 36.10 31.36 15.37 15.39 22.83 60.67 91.64 67.64 59.17 36.01 0.00 48.03 43.64 59.04 18.51 149.48 27.01 70.12 52.08 47.82 68.80 64 ER10a ExonRegion 0 249.21 603.69 1073.23 407.05 271.51 407.28 276.06 824.91 794.88 1013.55 3466.64 1126.26 545.42 1502.53 1557.52 1100.74 1542.88 1313.64 770.05 932.58 928.50 709.13 719.77 65 E10_Da NovelBoundary 0 97.13 248.71 496.35 215.09 101.44 207.89 149.36 380.06 348.14 456.55 1159.56 395.53 213.78 489.38 567.40 346.15 528.75 556.76 255.07 426.39 331.00 283.02 263.77 66 E10a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.99 0.00 0.00 0.00 2.18 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 3.16 67 E10b_E11a KnownJunction 0 314.72 670.28 811.77 362.76 341.43 508.74 340.76 670.25 633.10 794.23 2894.42 1286.22 778.52 1758.26 1771.81 1046.82 1369.42 1088.15 642.47 917.72 724.77 593.78 594.72 68 ER10b ExonRegion 0 213.98 508.39 949.05 385.83 285.50 425.26 274.19 788.52 731.56 933.47 2727.13 1084.10 618.62 1578.32 1550.14 952.57 1271.51 1419.26 581.33 816.81 699.02 565.47 556.79 69 ER11a ExonRegion 0 326.55 690.35 1215.63 481.94 328.10 530.32 303.50 1012.79 961.51 1192.23 3048.00 1174.93 699.48 1645.00 1549.82 1232.44 1394.71 1885.76 782.84 895.94 772.24 620.69 728.71 70 E11a_E12a KnownJunction 0 886.82 1869.27 1689.71 616.84 640.92 943.49 681.78 1336.92 1226.98 1489.76 4231.39 1867.96 1106.42 1738.90 2571.74 2606.50 2184.10 2487.95 1878.55 1913.55 1370.72 1570.58 2028.82 71 ER11b ExonRegion 0 515.42 1154.19 1407.79 524.00 424.86 666.63 428.45 1165.65 1064.88 1321.23 3531.24 1488.21 894.37 1647.92 1837.25 1868.82 1672.12 2144.43 1260.85 1304.16 1039.86 1027.08 1319.83 72 ER12a ExonRegion 0 373.07 858.86 1159.65 454.22 277.96 458.27 325.74 941.44 829.15 1003.86 2788.42 1207.92 699.15 1794.30 2040.62 1427.34 1370.95 1517.55 1161.28 1040.38 813.62 814.42 990.51 73 E12a_E13a KnownJunction 0 558.91 1005.22 1181.48 508.89 325.72 483.64 345.88 919.28 785.93 1002.51 3064.46 879.59 586.33 1575.62 1820.88 949.32 1250.58 1282.28 757.29 933.38 709.82 538.67 652.94 74 ER13a ExonRegion 0 548.52 1046.28 1131.56 454.14 386.93 587.07 395.30 918.75 778.66 944.68 3142.67 1098.45 596.10 1720.82 1952.01 1159.38 1324.95 1442.35 999.57 950.80 829.56 658.33 815.44 75 E13a_E14a KnownJunction 0 596.18 1151.97 1337.71 617.47 646.60 612.49 509.68 1027.34 824.41 977.96 3175.54 1110.36 532.76 1740.08 1698.50 1557.11 1262.55 1521.71 1242.58 1005.99 821.64 869.58 943.09 76 ER14a ExonRegion 0 521.79 954.46 1217.06 571.67 463.98 538.16 373.29 948.43 758.33 963.64 3064.98 1089.28 549.10 1739.09 1937.70 1376.13 1237.62 1399.25 1181.07 950.42 808.70 789.22 817.99 77 E14a_E15a KnownJunction 0 868.38 1012.52 1438.42 649.77 469.36 480.86 360.68 1062.91 828.61 1029.86 3120.21 1297.17 783.39 1948.86 2162.44 1390.58 1417.30 1349.81 1501.78 1026.89 884.59 946.36 920.81 78 ER15a ExonRegion 0 579.75 878.18 1316.80 554.70 356.91 510.96 344.73 1026.72 816.68 1051.04 2922.65 1000.51 477.26 1887.93 2012.66 1206.36 1391.01 1124.84 977.49 869.06 883.12 703.12 780.01 79 E15a_E16a KnownJunction 0 514.76 1039.09 1556.72 727.28 592.95 695.05 474.44 1204.82 986.01 1246.53 2731.64 900.29 422.54 1864.51 2797.58 1450.13 1585.22 1057.23 1350.53 998.07 799.03 949.67 900.24 80 ER16a ExonRegion 0 649.71 1098.53 1429.86 669.48 574.58 619.10 435.91 1214.72 949.56 1134.18 3189.84 900.30 481.53 1957.15 2378.53 1417.20 1575.48 1280.27 1219.49 1063.01 855.88 858.71 890.11 81 E16a_E17a KnownJunction 0 976.54 1267.80 1546.69 697.28 668.68 737.08 466.67 1313.18 999.50 1085.09 3668.03 1012.83 716.02 1889.06 2175.05 1658.97 1643.57 1735.82 1294.06 1134.98 871.80 639.65 965.54 82 ER17a ExonRegion 0 856.18 1017.00 1422.00 676.28 460.99 535.47 378.28 1212.58 951.46 1156.35 3640.46 1220.00 627.55 2102.00 2630.35 1699.21 1499.30 1600.43 1331.29 1165.51 895.76 857.91 1055.88 83 E17a_E18a KnownJunction 0 1078.34 1257.93 1591.90 790.01 502.63 569.67 416.28 1389.37 1084.07 1365.47 3710.62 1322.53 585.84 1990.65 3040.00 1535.49 1795.60 1294.88 1412.09 1236.35 992.70 966.26 940.19 84 ER18a ExonRegion 0 438.39 620.26 961.70 468.44 321.74 382.62 268.07 951.15 755.66 904.72 2694.68 1014.89 566.98 1389.89 1963.96 1020.09 1192.12 1123.04 1032.71 819.92 695.56 577.73 677.93 85 ER18b ExonRegion 1 570.56 228.31 133.05 89.01 207.47 165.04 159.28 179.49 133.20 133.88 302.05 499.72 531.06 655.21 824.85 200.39 241.09 186.62 313.15 220.21 130.02 76.13 172.02 86 IG40_AR1 ActiveIntergenicRegion 0 43.85 207.19 170.25 69.13 91.69 131.52 76.57 323.43 262.55 192.23 68.21 43.89 5.75 59.44 62.71 55.49 73.65 195.96 219.74 251.66 79.99 76.62 108.99