Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPATCH1 Gene 0 40.10 58.80 51.08 54.59 48.67 39.09 45.55 54.08 51.66 50.92 43.51 42.02 34.79 56.14 39.29 44.05 46.07 51.51 26.33 39.86 24.16 18.11 21.03 2 170564 Transcript 0 43.56 63.29 55.11 56.87 54.45 42.38 49.36 59.29 55.31 54.49 46.70 48.93 37.77 63.43 39.96 47.64 47.67 55.85 25.49 42.25 24.85 18.45 23.58 3 ER1a ExonRegion 0 15.94 22.82 2.78 5.24 17.02 12.38 18.25 8.03 7.69 6.54 9.60 0.47 0.82 7.84 5.65 13.21 12.43 16.60 7.96 11.30 5.87 3.49 8.89 4 E1a_E2a KnownJunction 0 7.04 34.27 12.30 24.81 18.08 19.31 21.29 43.50 35.18 41.53 5.32 0.00 7.63 4.83 4.82 17.43 12.90 47.30 0.00 16.23 5.62 4.96 0.00 5 ER2a ExonRegion 0 3.14 15.91 21.10 34.99 10.64 11.48 14.01 34.04 50.15 39.50 23.28 25.72 25.22 34.19 15.95 31.59 50.78 38.39 19.30 40.36 19.28 11.90 21.21 6 E2a_E3a KnownJunction 1 2.96 17.50 21.97 45.88 7.47 11.81 11.17 51.84 66.87 58.99 29.38 44.11 6.33 74.64 64.78 132.53 50.58 110.43 28.99 65.00 18.16 31.72 88.86 7 ER3a ExonRegion 0 6.42 44.76 24.78 38.57 62.88 48.66 48.72 33.12 66.98 44.80 31.98 34.48 17.23 34.09 23.51 45.17 37.19 51.84 16.11 52.57 20.58 22.02 26.22 8 E3a_E4a KnownJunction 0 32.45 80.05 36.04 38.39 106.45 108.46 132.44 24.44 49.36 47.89 47.96 63.02 13.64 34.14 24.60 16.24 41.23 18.45 12.24 57.14 22.49 8.39 8.11 9 ER4a ExonRegion 0 42.99 76.44 42.16 45.35 35.38 35.15 50.75 37.67 52.93 50.61 44.10 49.61 21.29 45.67 23.48 27.58 48.90 38.87 18.06 54.74 26.83 14.88 17.18 10 E4a_E5a KnownJunction 1 26.75 39.86 39.38 50.71 39.13 19.99 37.54 61.78 39.18 45.24 73.91 80.88 12.99 57.63 18.54 31.70 53.76 49.12 12.99 50.05 27.06 13.10 23.99 11 ER5a ExonRegion 0 25.51 49.37 32.45 49.56 44.23 32.90 47.20 51.96 49.83 51.20 50.65 31.90 15.12 62.35 26.41 44.28 63.02 54.53 28.96 42.71 29.50 18.20 24.03 12 E5a_E6a KnownJunction 0 13.04 64.26 41.28 33.60 63.58 37.54 63.37 34.75 57.29 47.47 62.23 12.60 25.65 81.70 47.47 40.25 29.36 66.33 38.50 31.89 19.15 22.41 49.00 13 E6_Aa NovelBoundary 0 0.00 3.35 0.00 17.65 3.74 0.00 3.89 2.05 5.18 3.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.71 7.72 0.00 0.00 0.00 0.00 14 ER6a ExonRegion 0 8.00 60.59 43.43 37.84 37.82 24.34 42.46 37.70 51.27 45.55 44.13 22.97 31.72 64.19 27.00 28.31 42.97 36.42 10.20 41.62 32.01 15.93 20.66 15 E6a_E7a KnownJunction 1 13.41 94.79 37.73 41.75 36.08 35.21 32.37 47.81 47.02 52.46 48.38 36.76 31.82 69.34 10.75 20.34 47.87 29.02 8.66 30.30 34.78 13.90 6.91 16 ER7a ExonRegion 0 20.95 72.02 45.39 43.72 49.28 37.20 43.86 53.87 58.91 49.13 51.43 53.41 35.29 64.13 24.77 37.60 56.45 52.08 23.03 45.22 23.38 20.65 27.95 17 E7a_E8a KnownJunction 1 22.60 74.39 39.21 34.33 80.05 65.08 54.63 68.43 70.54 64.90 37.01 56.27 53.41 53.03 8.90 26.92 85.37 73.91 20.89 28.44 25.88 18.13 34.23 18 E8_Aa NovelBoundary 0 0.00 2.63 7.33 0.00 4.33 16.69 5.70 13.39 0.00 6.45 0.00 0.00 12.99 0.00 4.45 7.43 4.21 14.55 3.58 8.44 3.15 3.12 0.00 19 ER8a ExonRegion 0 18.46 68.44 31.98 47.04 51.65 52.78 55.57 56.97 57.56 52.07 51.12 68.39 44.02 69.28 26.76 46.61 53.86 61.79 25.61 42.14 29.75 26.82 27.56 20 E8a_E9a KnownJunction 0 9.71 73.08 27.14 53.41 54.24 50.20 55.47 67.81 41.52 56.30 38.43 36.76 46.91 82.52 28.18 50.76 41.80 38.63 31.06 35.03 27.68 25.60 26.21 21 ER9a ExonRegion 0 16.27 89.99 32.84 44.21 45.62 31.63 54.20 68.32 52.86 61.70 55.91 65.54 39.98 83.76 30.97 71.52 59.37 41.20 32.25 49.07 23.55 30.08 33.77 22 E9a_E10a KnownJunction 0 28.30 87.88 33.94 43.48 28.69 38.22 42.44 77.14 73.44 63.82 56.96 81.78 61.36 69.05 25.09 34.78 38.15 34.28 21.74 44.87 19.65 21.06 12.55 23 E10_Aa NovelBoundary 0 19.26 3.35 24.60 16.35 8.32 8.06 15.06 13.76 4.77 15.42 0.00 6.30 0.00 2.47 0.00 11.36 13.37 19.86 13.27 2.81 5.93 3.12 4.35 24 ER10a ExonRegion 0 33.11 70.57 45.36 43.88 41.02 41.86 49.08 66.79 52.42 60.91 46.39 44.14 29.79 69.34 29.47 67.95 57.47 52.43 31.74 43.48 36.65 13.42 28.84 25 E10_Da NovelBoundary 0 24.00 0.00 10.20 14.32 8.32 0.00 19.61 22.67 9.64 10.69 0.00 6.30 6.82 0.00 0.00 8.46 0.00 4.27 17.32 8.18 0.00 0.00 4.35 26 E10a_E11a KnownJunction 0 26.67 31.05 25.99 26.90 62.65 26.92 47.65 61.98 45.57 36.29 50.64 55.37 19.48 74.93 44.38 53.66 85.09 59.15 35.39 47.87 34.16 3.12 20.40 27 E11_Aa NovelBoundary 0 0.00 19.40 5.94 16.91 3.90 12.15 3.62 12.98 4.20 4.38 2.58 6.30 6.82 2.41 0.00 7.95 3.83 7.01 4.80 11.38 3.03 2.76 3.93 28 ER11a ExonRegion 0 25.27 47.03 48.96 46.83 39.02 35.85 49.21 53.22 47.65 46.10 51.82 34.45 28.58 72.70 41.68 52.77 52.04 67.12 32.13 36.32 35.27 14.55 22.89 29 E11a_E12a KnownJunction 0 36.38 64.46 58.01 55.04 33.96 25.16 55.60 42.76 58.19 52.57 37.64 64.22 19.32 73.05 46.48 54.52 57.50 97.50 36.33 52.92 45.04 11.27 10.50 30 E12_Aa NovelBoundary 0 3.26 6.31 0.00 1.83 4.33 0.00 0.00 9.24 1.56 3.01 0.00 0.00 0.00 0.00 0.00 0.00 4.68 6.59 4.24 5.82 0.00 0.00 12.89 31 ER12a ExonRegion 0 25.95 39.88 41.20 42.71 43.42 43.39 34.96 47.70 48.52 46.96 54.68 26.61 29.76 65.02 54.86 49.53 39.13 65.72 29.11 45.89 31.58 13.11 22.38 32 E12_Da NovelBoundary 0 0.00 5.13 2.93 6.29 0.00 0.00 0.00 7.64 1.50 5.48 5.16 0.00 0.00 2.47 4.45 3.93 4.39 20.98 4.80 3.26 0.00 0.00 15.45 33 E12a_E13a KnownJunction 0 49.42 103.86 63.63 59.33 54.92 24.47 38.51 74.39 51.82 51.49 51.22 51.32 82.46 99.06 54.76 69.21 29.36 56.50 27.58 52.41 23.78 10.78 38.58 34 ER13a ExonRegion 0 28.46 56.92 59.13 36.25 70.61 44.94 60.78 59.56 56.82 65.77 75.93 33.93 40.60 61.96 56.46 51.41 63.54 56.70 36.33 42.62 32.54 18.87 28.08 35 E13_Da NovelBoundary 0 6.82 9.08 10.08 48.05 6.62 2.50 18.55 17.13 19.01 13.00 5.16 13.65 0.00 4.59 10.75 0.00 0.00 8.29 0.00 9.52 8.71 8.94 0.00 36 E13a_E14a KnownJunction 0 20.00 25.46 57.72 16.71 42.78 15.79 45.05 63.62 33.91 56.87 51.86 55.67 69.80 72.52 58.59 19.82 55.45 39.17 8.47 32.02 19.46 17.76 13.32 37 I13 Intron 0 22.79 16.87 14.75 35.17 22.39 14.14 21.77 18.55 13.92 18.28 5.62 8.43 14.65 8.39 7.81 8.65 4.56 7.22 6.03 10.84 1.44 6.06 5.77 38 I13_AR1 ActiveIntronRegion 0 22.86 16.92 14.79 35.27 22.45 14.18 21.83 18.60 13.96 18.33 5.64 8.45 14.69 8.41 7.83 8.68 4.58 7.24 6.04 10.87 1.44 6.08 5.79 39 E14_Aa NovelBoundary 0 21.26 17.76 44.26 77.85 22.67 57.47 46.64 35.57 42.68 30.25 16.85 0.00 20.13 9.48 13.35 10.85 7.67 23.21 4.80 11.76 3.15 6.00 0.00 40 ER14a ExonRegion 1 98.72 67.54 93.41 88.42 59.51 66.46 64.06 103.04 85.90 90.23 70.44 45.32 115.50 79.83 65.73 94.24 85.25 92.90 60.48 55.49 29.97 41.12 48.02 41 E14_Da NovelBoundary 0 6.67 5.79 3.10 7.13 19.95 2.90 10.25 8.54 12.96 11.36 0.00 6.00 0.00 7.30 9.39 12.05 3.74 7.01 9.60 6.20 2.84 0.00 7.00 42 E14a_E15a KnownJunction 0 99.80 74.07 67.77 82.34 93.46 81.71 49.82 92.21 77.86 60.52 80.97 44.41 48.37 81.88 25.96 99.03 63.39 55.34 52.99 48.90 30.58 19.35 39.69 43 E15_Aa NovelBoundary 1 10.74 8.29 8.72 14.75 0.00 2.90 6.45 22.06 7.03 9.24 0.00 0.00 20.13 4.94 0.00 7.69 0.00 2.40 0.00 6.01 0.00 3.12 3.84 44 ER15a ExonRegion 0 96.90 73.28 95.09 100.92 76.11 71.87 72.98 88.47 83.12 73.04 59.18 60.59 64.57 78.20 62.40 67.75 58.78 75.56 48.12 50.54 22.59 27.51 24.64 45 E15_Da NovelBoundary 0 0.00 11.84 4.97 10.75 0.00 0.00 6.05 19.88 6.48 5.13 0.00 18.76 8.12 0.00 0.00 0.00 0.00 1.91 0.00 11.44 0.00 3.12 4.35 46 E15a_E16a KnownJunction 0 44.60 55.91 66.47 98.32 62.48 51.45 36.43 65.80 43.84 51.23 35.80 64.67 33.44 53.51 24.85 57.16 17.02 79.63 9.51 38.16 24.59 11.02 17.33 47 ER16a ExonRegion 0 58.54 65.69 80.69 85.30 57.40 59.48 55.91 71.46 60.36 73.14 53.80 67.06 36.50 73.90 57.72 56.32 51.29 86.07 28.29 49.18 29.69 22.79 15.96 48 E16a_E17a KnownJunction 0 135.14 105.57 120.10 103.45 104.33 65.02 100.34 79.68 73.44 78.95 70.86 68.12 33.93 57.63 43.02 96.98 52.08 109.06 45.08 54.01 35.58 34.23 11.27 49 ER17a ExonRegion 0 61.59 51.10 73.92 72.02 43.70 50.00 55.34 57.50 44.81 46.77 40.68 35.44 41.65 64.66 48.19 55.45 39.43 59.09 24.42 36.74 23.98 17.25 8.78 50 E17a_E18a KnownJunction 0 56.23 65.78 68.18 60.43 56.37 52.58 39.22 40.46 40.36 45.48 37.80 25.21 34.58 44.38 50.19 33.32 25.43 44.02 12.52 29.59 6.18 3.12 12.72 51 E18_Aa NovelBoundary 0 16.30 5.85 9.79 8.99 19.19 13.40 11.70 11.05 5.03 4.75 2.58 0.00 0.00 0.00 6.30 3.59 0.00 5.72 4.80 8.25 0.00 0.00 0.00 52 ER18a ExonRegion 0 114.90 96.60 94.72 102.80 88.30 64.91 62.16 73.69 55.49 55.81 48.11 55.71 59.97 79.22 66.26 41.31 49.14 67.56 34.88 55.82 25.05 16.22 29.19 53 E18_Da NovelBoundary 0 0.00 0.00 4.91 0.00 8.66 4.88 0.00 7.11 4.63 5.99 4.84 0.00 0.00 0.00 8.90 15.81 0.00 8.17 4.52 5.62 0.00 2.57 0.00 54 E18a_E19a KnownJunction 0 205.37 106.36 155.61 123.86 107.89 75.92 61.47 104.20 75.78 71.88 47.54 62.12 54.05 113.72 76.27 49.30 48.71 68.48 29.46 51.33 24.09 27.37 23.65 55 ER19a ExonRegion 1 69.25 83.25 129.07 126.45 89.53 44.88 56.69 88.78 79.84 83.74 40.42 75.85 55.09 65.00 81.73 36.70 49.72 41.98 21.18 51.60 23.38 25.54 15.53 56 E19_Da NovelBoundary 0 0.00 0.00 4.38 3.46 0.00 2.44 0.00 3.94 4.63 3.81 2.68 0.00 6.82 0.00 0.00 8.72 4.30 14.67 3.48 0.00 0.00 0.00 0.00 57 E19a_E20a KnownJunction 1 43.19 41.11 90.30 65.99 43.63 16.41 31.18 66.91 66.26 52.25 29.74 123.04 54.54 70.10 81.59 14.70 33.10 26.20 13.84 12.72 13.59 28.90 24.67 58 ER20a ExonRegion 1 55.23 76.44 48.27 67.02 64.01 21.59 32.89 51.02 46.54 45.49 24.19 50.39 30.56 30.69 50.17 20.10 20.05 18.88 19.80 21.32 10.18 18.91 6.01 59 IG24_AR1 ActiveIntergenicRegion 0 4.18 18.39 6.31 9.57 3.75 4.32 4.58 3.34 6.13 6.18 0.72 2.99 1.64 3.01 3.75 2.22 0.82 2.61 3.82 2.92 0.54 1.29 0.00