Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RFXANK Gene 0 49.37 16.10 93.52 53.69 29.41 40.70 19.56 40.51 25.18 47.96 204.94 28.23 31.89 157.61 332.51 175.63 158.90 67.77 109.21 43.39 105.43 63.33 82.62 2 353145 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 303088 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 392324 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 407360 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 456252 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 5.73 1.74 1.03 0.11 0.48 1.72 1.16 0.00 0.75 0.71 1.88 1.02 0.24 3.10 3.33 1.65 0.96 1.64 1.30 1.33 2.06 1.40 1.34 8 E1a_E2b KnownJunction 0 3.33 12.76 5.88 1.90 0.00 5.05 0.00 0.00 5.09 4.06 9.42 0.00 6.66 7.06 20.40 3.42 8.51 7.79 4.05 14.96 8.28 3.12 7.77 9 E2_Aa NovelBoundary 1 135.51 23.15 35.81 43.22 70.71 120.27 40.94 17.21 9.90 18.37 76.28 7.05 37.66 87.29 82.58 452.96 75.92 109.60 306.46 41.42 27.37 48.01 194.46 10 E2_Ab NovelBoundary 0 52.08 8.55 38.08 53.17 28.01 8.69 18.72 9.08 9.55 28.29 41.33 0.00 14.93 45.62 54.14 54.94 47.97 31.71 40.47 11.76 18.04 11.45 37.13 11 ER2a ExonRegion 1 20.11 9.49 6.74 5.00 12.04 8.25 3.09 1.15 1.03 4.97 70.87 0.00 0.78 25.72 81.72 51.52 53.36 7.39 11.15 7.09 23.51 18.75 25.45 12 ER2b ExonRegion 0 103.86 22.09 94.11 50.36 72.61 61.31 35.49 50.67 31.06 55.44 345.67 35.41 40.33 140.78 277.01 289.21 318.30 85.56 175.60 42.29 197.44 92.00 190.40 13 E2a_E3a KnownJunction 0 33.04 12.50 181.07 152.79 15.28 48.78 1.90 68.22 63.66 100.65 517.39 40.51 73.70 212.96 344.03 482.27 548.67 214.11 442.55 77.08 308.15 107.28 190.36 14 ER3a ExonRegion 0 41.80 24.97 170.07 110.53 70.72 107.08 40.89 78.57 50.40 93.86 437.76 41.23 68.88 274.29 532.77 476.55 394.57 176.42 316.07 81.40 221.28 137.28 243.33 15 E3a_E4a KnownJunction 0 40.90 35.72 113.80 41.42 67.83 77.11 54.01 23.08 25.09 51.63 151.99 6.30 13.15 95.65 206.56 125.69 117.91 58.78 67.67 36.56 92.23 56.76 50.19 16 E3a_E4b KnownJunction 0 47.19 43.41 104.70 62.73 104.16 101.82 75.21 45.63 27.60 47.55 226.85 37.06 51.46 146.15 250.08 128.94 189.34 77.52 249.42 56.25 97.79 80.22 43.71 17 ER4a ExonRegion 0 32.28 29.49 112.73 46.68 54.18 71.06 49.98 35.43 21.31 56.77 189.42 14.07 32.83 128.31 229.92 130.77 139.46 60.98 91.58 37.23 106.88 64.07 47.72 18 ER4b ExonRegion 0 122.15 48.86 155.56 86.65 47.29 66.43 43.91 63.28 36.84 77.00 345.05 50.28 69.76 257.32 482.19 213.06 263.04 85.18 161.10 64.23 144.67 98.24 83.00 19 E4_Da NovelBoundary 0 52.60 0.00 17.00 10.26 15.11 5.00 5.70 4.97 4.37 4.27 22.43 6.30 0.00 18.78 22.99 4.36 22.16 4.97 4.80 6.01 23.78 9.00 28.51 20 E4a_E5a KnownJunction 0 203.59 45.98 141.66 62.40 12.73 67.92 19.03 54.87 35.30 56.87 336.14 49.97 87.17 225.50 486.68 187.04 213.93 111.05 126.87 62.13 139.31 94.67 69.57 21 E4a_E6a KnownJunction 0 34.01 0.00 0.00 1.47 0.00 0.00 2.12 8.34 1.79 6.37 11.16 0.00 0.00 27.02 50.93 19.23 56.01 0.00 0.00 2.56 5.93 5.82 3.41 22 I4 Intron 0 15.53 0.00 4.02 2.24 3.93 0.00 1.46 0.00 0.68 1.88 12.77 1.31 2.83 17.04 32.19 17.45 15.74 7.42 5.84 3.90 16.17 3.06 6.46 23 I4_AR1 ActiveIntronRegion 0 15.76 0.00 4.08 2.27 3.98 0.00 1.48 0.00 0.69 1.91 12.95 1.33 2.88 17.28 32.65 17.70 15.97 7.51 5.93 3.96 16.39 3.10 6.56 24 E5_Aa NovelBoundary 0 17.34 0.00 10.11 31.40 7.98 7.84 2.25 7.80 2.75 13.30 12.85 0.00 13.64 19.95 32.63 14.36 11.22 30.72 12.33 8.50 22.18 13.35 7.68 25 ER5a ExonRegion 0 110.35 21.85 111.81 65.13 19.26 36.29 20.14 42.35 29.10 57.62 245.27 29.26 53.86 246.40 469.83 170.85 123.38 105.10 100.24 59.83 131.69 68.03 71.24 26 E5_Da NovelBoundary 0 14.00 0.00 26.61 10.49 8.66 8.46 6.62 0.00 2.86 10.29 35.48 0.00 6.82 27.49 56.62 16.15 43.48 18.94 8.38 3.13 20.70 17.51 19.55 27 E5a_E6a KnownJunction 0 99.13 12.43 136.87 88.53 19.19 26.01 20.01 49.58 32.78 61.78 250.33 47.57 47.24 214.26 468.26 184.31 120.80 137.25 128.38 69.29 102.18 84.44 56.43 28 I5 Intron 0 13.24 0.77 13.50 10.01 5.07 3.12 2.51 5.37 2.09 3.56 20.52 2.17 2.93 17.19 41.61 23.10 16.27 15.67 12.08 4.03 11.68 15.41 10.58 29 I5_AR1 ActiveIntronRegion 0 13.34 0.78 13.60 10.09 5.11 3.15 2.53 5.41 2.11 3.59 20.68 2.19 2.95 17.32 41.92 23.28 16.39 15.79 12.17 4.06 11.77 15.52 10.66 30 E6_Aa NovelBoundary 0 26.52 2.57 18.51 12.92 6.96 8.06 7.51 1.68 4.43 3.22 17.79 12.15 0.00 12.01 27.20 11.88 7.11 14.18 8.47 11.31 15.94 13.84 3.24 31 ER6a ExonRegion 0 98.93 21.30 151.36 83.64 19.58 44.45 26.99 51.84 33.64 61.40 276.71 49.04 37.06 301.12 520.73 217.94 177.33 101.41 125.11 57.13 137.04 89.24 69.05 32 E6a_E7a KnownJunction 0 72.38 22.43 189.97 93.29 7.30 54.40 22.30 65.92 37.79 59.36 248.85 25.66 28.57 219.20 599.30 214.90 172.14 102.31 103.63 71.91 109.16 81.56 89.46 33 E7_Aa NovelBoundary 0 16.00 0.00 3.13 5.06 0.00 16.41 0.00 0.00 0.00 3.44 2.26 0.00 6.82 7.36 18.54 28.20 0.00 2.32 7.91 2.56 8.34 5.45 0.00 34 ER7a ExonRegion 0 45.71 23.08 137.06 66.78 35.08 45.38 19.20 52.96 35.20 59.17 243.05 34.09 20.88 252.54 601.13 199.96 164.84 78.02 130.65 62.43 143.56 84.58 80.04 35 E7_Da NovelBoundary 0 21.78 3.35 14.01 16.58 7.64 2.90 8.17 0.00 2.66 1.58 20.79 0.00 6.17 19.07 23.98 31.96 4.77 13.27 8.47 5.75 14.64 8.76 20.06 36 E7a_E8a KnownJunction 0 63.42 44.33 201.44 90.83 43.04 66.78 23.19 90.94 43.43 68.93 288.39 67.97 52.11 271.94 655.17 271.64 203.74 101.10 150.03 49.47 129.24 108.20 120.45 37 E8_Aa NovelBoundary 0 3.70 0.00 15.61 24.77 12.82 2.38 2.08 6.70 4.22 13.32 4.21 12.45 0.00 18.19 59.71 29.31 22.25 3.69 0.00 22.18 14.15 12.00 4.35 38 ER8a ExonRegion 0 55.82 19.46 173.75 101.81 49.00 56.00 24.74 79.10 38.03 76.36 292.47 43.17 40.81 237.27 584.75 181.26 210.12 84.91 91.42 74.79 151.89 83.56 61.80 39 E8a_E9a KnownJunction 0 83.35 9.47 167.65 126.52 44.82 44.86 24.29 62.35 43.81 89.64 315.19 43.51 29.22 157.40 576.92 124.50 164.84 69.35 101.65 82.96 150.24 88.79 43.11 40 ER9a ExonRegion 1 43.53 6.90 125.50 75.03 11.20 37.38 17.72 56.01 37.60 78.98 223.26 61.15 51.01 205.56 577.46 163.25 138.07 61.27 79.56 77.70 117.99 60.29 62.79 41 E9a_E10a KnownJunction 0 68.83 15.33 161.91 72.62 4.33 47.13 12.01 67.90 29.22 79.03 258.59 29.71 35.55 278.89 780.64 256.94 200.84 80.63 177.13 82.90 130.16 95.34 99.62 42 E10_Aa NovelBoundary 0 15.48 67.22 116.23 60.76 24.45 49.35 20.36 37.75 19.79 43.81 74.39 11.55 8.12 84.53 66.01 110.57 67.23 101.31 87.16 77.15 14.27 35.27 36.11 43 ER10a ExonRegion 0 28.39 10.10 62.20 34.98 10.89 16.63 7.17 28.86 16.06 34.41 92.11 19.60 19.92 95.58 232.45 81.17 61.63 27.82 42.65 28.12 37.21 38.39 30.55 44 ER10b ExonRegion 0 1.41 0.00 0.00 0.00 2.68 0.61 2.65 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00