Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	C19orf60	Gene	0	74.37	30.37	139.99	83.67	21.03	44.35	20.26	60.38	73.19	61.40	41.65	12.25	13.99	115.33	184.37	70.50	61.97	80.56	73.49	70.64	116.85	81.21	67.21
2	450195	Transcript	0	0.00	0.00	1.45	1.63	0.00	0.00	0.00	8.75	5.03	4.03	9.37	0.00	0.00	6.83	8.78	4.19	14.87	2.57	0.00	0.00	7.35	3.06	7.68
3	358607	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	397219	Transcript	0	1.06	0.00	52.49	38.74	1.34	0.00	0.00	24.36	22.82	31.87	0.00	0.00	0.00	4.06	6.53	0.25	0.00	45.27	2.92	2.84	0.92	2.43	1.96
5	397217	Transcript	0	101.44	26.75	145.76	93.10	20.10	58.15	24.54	57.30	71.68	58.95	31.49	11.78	11.18	79.02	101.07	58.00	41.62	108.66	51.29	67.78	78.55	52.40	51.96
6	ER1a	ExonRegion	0	13.26	2.27	4.75	0.94	3.49	7.69	2.87	0.92	1.34	1.85	1.79	0.00	0.16	3.12	20.70	8.56	7.83	2.76	7.94	3.48	21.29	13.44	19.21
7	E1_Ab	KnownBoundary	1	106.69	8.95	19.07	6.29	28.78	37.25	23.67	6.28	13.92	11.07	12.79	0.00	0.00	21.07	124.61	58.28	67.70	18.74	37.08	6.14	57.76	28.41	79.13
8	ER1b	ExonRegion	0	211.46	57.62	72.11	35.66	36.42	100.62	44.84	28.94	44.36	28.93	41.97	1.86	1.82	107.79	199.30	73.54	79.26	95.10	95.14	57.75	115.42	61.51	99.31
9	E1a_E2a	KnownJunction	0	147.51	63.02	95.68	61.10	38.54	73.37	33.56	47.32	59.03	30.19	34.27	0.00	6.01	19.54	60.20	44.18	69.38	110.93	36.71	49.66	90.63	27.31	40.89
10	ER2a	ExonRegion	1	20.68	9.95	56.43	27.75	8.29	17.59	8.06	33.38	30.19	20.02	38.29	0.00	0.00	42.13	65.47	20.73	54.52	37.82	30.05	21.66	111.25	26.38	34.71
11	E2_Da	NovelBoundary	1	9.93	6.05	48.90	34.03	3.48	9.88	4.46	28.59	35.42	29.12	21.58	6.30	6.49	53.27	70.96	17.35	54.60	30.92	27.01	37.01	56.03	25.11	32.35
12	E2a_E3b	KnownJunction	0	3.78	0.00	30.63	16.68	3.23	0.00	4.28	17.62	26.68	17.22	41.33	0.00	0.00	23.43	68.98	15.38	45.54	20.60	16.00	40.72	105.52	21.68	23.39
13	E2a_E3c	KnownJunction	0	0.00	0.00	1.45	1.63	0.00	0.00	0.00	8.75	5.03	4.03	9.37	0.00	0.00	6.83	8.78	4.19	14.87	2.57	0.00	0.00	7.35	3.06	7.68
14	E2a_E4a	NovelJunction	0	0.00	0.00	23.86	1.56	0.00	0.00	0.00	4.85	5.67	4.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.42	6.52	2.84	3.12	4.35
15	I2	Intron	0	10.15	5.32	19.90	8.85	2.33	5.60	1.73	3.37	12.84	5.96	6.74	0.00	1.44	34.19	75.58	36.28	11.51	16.01	24.99	26.90	19.19	19.09	29.44
16	I2_AR1	ActiveIntronRegion	0	10.31	5.41	20.22	9.01	2.37	5.69	1.76	3.43	13.06	6.05	6.84	0.00	1.47	34.78	76.87	36.85	11.71	16.29	25.43	27.34	19.53	19.42	29.93
17	E3_Aa	NovelBoundary	1	32.15	27.63	140.21	107.91	26.74	19.08	24.60	63.87	66.93	59.39	13.79	34.96	12.99	50.21	65.76	83.31	29.08	97.08	61.74	71.52	55.11	55.05	49.25
18	ER3a	ExonRegion	0	101.44	26.75	145.76	93.10	20.10	58.15	24.54	57.30	71.68	58.95	31.49	11.78	11.18	79.02	101.07	58.00	41.62	108.66	51.29	67.78	78.55	52.40	51.96
19	E3_Ab	KnownBoundary	0	159.44	27.43	149.99	113.77	31.07	50.94	16.65	61.36	86.14	78.25	27.01	6.15	6.66	101.36	122.01	50.67	46.28	148.73	48.28	50.24	88.65	78.20	58.90
20	ER3b	ExonRegion	0	74.56	18.36	134.09	78.68	21.85	37.70	14.00	46.69	59.81	62.07	42.38	10.43	6.25	150.90	217.73	81.37	83.02	112.49	78.57	89.01	136.23	69.36	77.02
21	E3_Ac	KnownBoundary	0	54.38	26.84	149.85	84.30	15.53	62.86	10.11	54.38	64.35	61.54	20.48	17.41	18.51	88.94	152.42	41.78	32.07	86.06	43.86	54.27	52.63	24.74	44.47
22	ER3c	ExonRegion	0	49.71	45.79	167.02	95.05	23.51	42.59	23.81	79.64	87.75	89.28	41.00	11.61	21.74	212.24	306.35	109.07	59.77	149.81	100.24	117.25	129.15	87.41	104.16
23	E3_Da	KnownBoundary	0	40.90	41.97	110.02	74.42	28.18	28.45	41.12	64.77	79.89	64.71	38.01	6.30	0.00	101.36	123.99	88.27	61.06	122.20	81.51	74.72	105.64	57.44	94.24
24	E3a_E3d	KnownJunction	0	0.00	0.00	104.17	76.58	0.00	0.00	0.00	48.71	45.23	63.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	90.53	0.00	0.00	0.00	0.00	0.00
25	E3_Ad	KnownBoundary	0	33.71	21.11	93.76	65.69	8.66	32.42	6.27	64.53	53.88	59.31	28.06	22.81	0.00	50.39	79.12	43.83	26.27	101.19	46.02	61.42	43.74	75.81	63.51
26	ER3d	ExonRegion	0	46.21	54.91	193.20	128.79	24.53	61.74	33.76	116.09	108.90	124.25	57.99	30.31	10.94	255.53	349.60	133.25	79.77	179.85	127.41	113.12	156.10	126.05	126.28
27	ER3e	ExonRegion	0	33.54	41.44	153.02	78.17	28.48	69.68	31.58	62.72	72.95	83.40	47.46	18.14	17.34	147.28	275.58	59.04	69.97	66.24	60.16	82.14	153.49	82.24	56.40
28	E3_Db	NovelBoundary	0	13.26	18.55	29.92	24.34	3.90	23.91	15.15	32.04	27.11	35.00	6.79	12.60	0.00	18.89	0.00	12.05	8.51	46.97	17.88	16.30	4.70	11.82	18.44
29	E3b_E4a	KnownJunction	0	55.34	43.94	195.23	110.74	42.61	47.70	20.40	95.25	113.16	89.18	47.85	18.46	12.50	129.67	291.00	59.73	113.51	74.24	61.27	76.57	234.88	99.69	40.12
30	I3	Intron	0	20.19	38.95	29.14	35.55	16.07	18.04	15.05	26.70	19.09	27.88	5.24	7.98	9.80	19.55	15.39	16.10	8.36	30.94	27.38	22.93	16.49	15.34	26.98
31	I3_SR1	SilentIntronRegion	0	12.04	19.15	25.69	28.80	5.20	13.16	10.22	28.38	23.35	34.79	6.18	4.94	8.55	16.11	15.38	15.63	6.12	34.86	24.31	21.66	19.70	15.81	25.46
32	I3_SR2	SilentIntronRegion	0	14.82	21.65	40.94	36.24	21.09	46.06	20.56	33.76	29.28	37.11	15.80	14.26	2.76	23.12	26.62	19.58	13.01	33.26	33.73	31.16	10.37	17.65	35.93
33	I3_AR1	ActiveIntronRegion	0	22.43	44.51	29.77	37.39	18.66	18.47	16.09	26.16	17.85	26.04	4.69	8.56	10.41	20.37	15.12	16.20	8.80	30.08	28.11	23.15	15.98	15.26	27.18
34	E4_Aa	NovelBoundary	0	24.45	12.89	40.36	35.13	16.81	26.58	19.12	27.23	15.51	17.78	2.26	6.30	13.31	16.42	15.58	4.36	3.83	34.57	0.00	11.57	23.60	14.63	12.21
35	ER4a	ExonRegion	0	108.97	56.05	278.77	167.69	27.36	46.44	18.07	104.33	127.12	103.16	77.44	22.89	28.84	199.00	359.03	127.17	122.17	103.20	129.13	114.33	229.76	134.44	102.38
36	E4_Da	NovelBoundary	0	3.33	12.37	11.83	13.62	10.87	10.51	31.13	16.96	20.43	18.80	5.05	6.15	0.00	21.90	41.41	28.03	16.74	34.24	16.47	8.69	17.85	8.08	29.19
37	E4a_E5a	KnownJunction	0	171.96	43.35	372.58	247.92	35.65	45.09	19.96	174.40	175.90	137.88	114.19	48.92	46.91	281.54	435.75	231.73	135.11	174.77	248.85	165.93	280.78	208.68	230.91
38	E4_Db	NovelBoundary	0	0.00	9.93	17.80	16.95	11.29	21.46	33.74	18.85	18.61	7.55	10.27	0.00	0.00	17.95	10.51	4.36	13.18	19.61	13.93	22.95	22.30	31.66	16.65
39	ER4b	ExonRegion	0	2.12	0.00	0.82	0.91	2.68	0.00	0.00	0.00	0.41	0.19	0.00	0.00	0.00	8.12	13.06	0.50	0.00	0.00	5.84	5.67	1.84	4.86	3.92
40	I4	Intron	0	30.09	14.19	58.68	49.34	21.90	20.38	18.25	30.18	31.71	34.75	12.99	14.22	15.71	44.54	60.15	42.76	15.92	43.92	33.75	36.48	34.35	35.18	32.89
41	I4_AR1	ActiveIntronRegion	0	30.18	14.24	58.87	49.51	21.97	20.45	18.30	30.28	31.82	34.86	13.03	14.27	15.76	44.68	60.35	42.90	15.98	44.07	33.87	36.60	34.47	35.30	33.00
42	E5_Aa	NovelBoundary	0	13.56	11.97	43.55	36.69	12.31	35.15	11.08	28.38	6.37	23.96	12.58	7.65	6.82	34.20	74.54	16.49	20.01	31.79	22.97	9.01	18.22	13.90	24.50
43	ER5a	ExonRegion	0	61.92	27.87	203.68	131.08	21.93	23.43	14.23	99.03	121.49	87.80	57.78	21.36	27.38	150.94	226.88	103.83	74.71	73.74	114.42	91.21	137.65	155.26	85.14
44	IG15	Intergenic	0	17.58	6.08	2.43	6.41	4.89	4.57	2.64	5.56	8.26	8.80	0.32	4.53	2.57	1.51	3.26	2.96	4.39	7.78	4.76	8.13	2.93	15.58	23.42
45	IG15_SR1	SilentIntergenicRegion	0	1.91	2.75	2.47	4.58	2.42	0.00	0.60	0.00	2.49	3.08	0.00	0.00	0.00	1.12	3.85	0.00	2.98	6.23	0.00	5.76	0.99	14.11	15.90
46	IG15_SR2	SilentIntergenicRegion	0	28.01	8.50	2.54	7.80	6.71	7.67	4.06	9.22	12.26	12.68	0.54	7.59	4.31	1.84	3.09	4.81	5.52	9.11	7.99	9.86	4.30	17.35	29.38