Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC024075.1 Gene 0 75.88 71.67 73.12 96.65 75.17 39.40 78.72 78.23 67.36 67.29 24.54 39.86 35.45 36.41 58.90 78.86 62.81 128.52 96.41 68.87 57.66 52.01 93.50 2 499938 Transcript 0 57.61 50.73 63.70 86.52 63.20 33.71 55.24 50.78 46.28 60.67 11.01 28.05 58.92 20.03 25.89 44.13 36.07 65.08 49.54 45.18 34.18 24.33 42.99 3 ER1a ExonRegion 1 2.98 6.74 0.00 0.25 3.67 1.29 3.29 0.42 0.18 0.15 0.00 13.39 27.18 15.76 6.98 2.97 1.47 0.27 3.01 1.85 0.00 2.01 5.22 4 E1_Da NovelBoundary 1 4089.17 2126.99 1284.37 1264.81 2054.33 1487.89 1958.48 1577.94 1330.57 1147.33 1103.75 345.56 426.76 308.02 639.10 2761.84 1991.40 1922.77 1711.67 1659.67 1623.76 910.79 2314.71 5 E1a_E2a KnownJunction 1 91.13 71.24 115.11 158.89 107.98 58.94 80.77 70.65 68.66 111.96 7.53 29.86 113.79 7.12 9.77 47.59 41.51 61.43 45.55 62.19 42.63 17.02 26.80 6 Ix_AR2 ActiveIntronRegion 0 13.12 7.31 9.00 14.61 6.56 3.00 6.42 8.55 7.08 12.32 8.74 2.91 1.56 19.61 19.97 10.20 3.49 10.00 3.91 6.21 1.44 1.89 1.44 7 Ix_AR4 ActiveIntronRegion 0 6.52 11.91 19.41 13.14 7.01 10.45 6.73 11.51 5.96 21.86 2.68 4.39 0.60 3.68 16.15 10.99 4.07 17.56 6.87 6.88 3.06 2.89 8.60 8 Ix_SR4 SilentIntronRegion 0 8.33 29.48 9.15 8.00 11.01 5.58 6.40 9.22 4.28 11.32 1.38 2.69 4.15 6.53 5.31 3.19 1.77 5.26 6.84 6.09 5.52 4.47 7.88 9 Ix_SR5 SilentIntronRegion 0 6.42 15.59 10.74 18.47 14.24 10.05 18.89 11.89 4.91 17.37 2.41 12.16 12.00 5.78 10.32 7.42 9.86 15.20 9.09 5.31 2.75 4.46 5.76 10 Ix Intron 0 18.73 11.13 10.74 12.97 11.11 3.76 11.30 9.16 8.48 8.42 9.35 12.88 11.76 6.20 17.54 17.08 15.96 16.35 16.13 13.20 6.74 4.66 8.71 11 Ix_SR1 SilentIntronRegion 0 19.16 11.68 11.46 13.84 11.72 4.02 11.80 9.78 9.05 8.98 9.50 13.22 11.98 6.61 17.81 17.79 16.55 17.44 17.05 13.67 6.97 4.77 8.57 12 Ix Intron 0 19.27 12.41 8.36 19.48 11.37 6.60 10.03 8.77 7.17 13.50 5.00 3.93 3.32 13.55 15.14 10.45 9.44 11.92 9.55 12.87 3.90 2.10 5.28 13 Ix_AR1 ActiveIntronRegion 0 19.96 12.86 8.66 20.18 11.78 6.83 10.39 9.09 7.43 13.99 5.18 4.07 3.44 14.00 15.68 10.82 9.78 12.34 9.84 13.33 4.04 2.12 5.47 14 Ix Intron 0 4.64 1.43 8.43 7.31 5.86 3.44 3.00 10.07 7.63 18.59 12.10 8.90 6.15 7.59 10.03 11.86 17.82 14.79 7.47 7.99 5.34 2.28 5.97 15 Ix_AR1 ActiveIntronRegion 0 4.65 1.44 8.45 7.33 5.88 3.45 3.01 10.10 7.65 18.64 12.13 8.93 6.17 7.62 10.06 11.89 17.87 14.84 7.50 8.01 5.36 2.29 5.99 16 Ix_AR1 ActiveIntronRegion 0 11.79 3.11 10.97 6.30 9.38 4.78 5.06 8.21 9.66 22.27 13.30 8.91 3.65 11.04 13.98 14.87 15.87 17.47 10.01 10.30 5.27 3.44 6.55 17 Ix_SR1 SilentIntronRegion 0 7.34 3.12 5.56 4.90 5.28 2.90 4.40 7.73 7.06 21.04 5.48 4.38 3.54 4.04 7.37 7.92 11.32 11.68 9.27 9.09 4.14 2.18 4.98 18 Ix_AR2 ActiveIntronRegion 0 4.43 5.11 6.51 5.20 4.93 2.67 4.24 8.61 7.75 19.37 2.91 1.80 1.95 3.64 7.65 7.69 9.13 14.41 6.75 7.43 5.93 2.33 2.48 19 Ix_SR2 SilentIntronRegion 0 6.71 3.10 4.27 5.13 5.19 3.34 3.65 10.33 5.32 17.22 9.24 4.52 3.89 3.79 6.95 6.56 8.77 11.06 6.55 10.10 3.31 0.75 7.26 20 Ix_AR4 ActiveIntronRegion 0 7.90 4.62 8.21 5.73 7.75 3.24 5.18 8.60 5.23 18.81 8.89 6.90 3.69 6.40 11.12 12.42 10.54 12.85 11.52 11.28 5.86 1.99 6.76 21 Ix_SR3 SilentIntronRegion 0 2.88 2.28 2.33 3.66 4.47 1.49 2.44 5.37 4.20 15.72 6.32 9.92 1.97 5.41 8.16 9.07 11.59 10.62 9.17 6.17 3.63 1.83 6.19 22 Ix_AR5 ActiveIntronRegion 0 3.73 2.01 3.89 3.54 4.83 2.60 3.10 7.43 4.71 18.75 18.21 6.53 5.70 12.47 13.97 14.26 22.30 9.49 7.13 7.51 4.22 1.66 3.54 23 Ix_AR3 ActiveIntronRegion 0 7.80 3.22 6.44 2.21 4.50 2.29 4.01 12.94 8.91 4.51 2.34 5.32 16.92 1.95 14.13 9.47 15.96 7.04 5.30 7.57 3.37 0.63 7.04 24 Ix_AR4 ActiveIntronRegion 0 5.23 4.16 8.52 2.39 5.15 1.22 9.74 7.14 6.41 4.84 0.56 16.04 13.55 1.96 12.57 6.11 14.96 2.32 6.80 4.64 4.10 0.35 4.89 25 Ix_AR5 ActiveIntronRegion 0 3.58 0.00 3.77 2.67 3.29 0.49 3.87 9.31 3.09 6.26 1.86 0.83 2.16 1.37 9.82 15.78 17.14 0.00 3.19 5.48 0.00 0.00 0.00 26 Ix_AR7 ActiveIntronRegion 0 9.23 3.19 6.32 3.41 6.27 2.88 4.66 6.68 6.31 5.43 1.85 5.59 8.59 0.69 14.36 9.89 14.28 4.73 11.86 5.59 1.53 0.36 13.42 27 Ix_AR9 ActiveIntronRegion 0 1.61 1.81 2.44 0.84 0.34 0.00 2.36 3.50 4.56 3.03 1.03 5.48 8.59 1.94 3.62 6.86 17.12 1.75 7.53 4.15 1.28 0.37 7.02 28 Ix Intron 0 34.91 41.26 29.26 45.84 47.91 24.61 36.68 35.21 28.89 24.60 10.07 16.51 14.36 18.13 35.51 28.59 25.79 31.67 36.06 31.55 18.41 26.83 37.17 29 Ix_SR1 SilentIntronRegion 0 28.48 18.01 12.29 23.02 28.43 15.59 17.77 15.48 12.39 13.92 8.89 2.53 5.47 9.47 8.64 24.17 8.14 19.21 23.69 18.09 4.68 18.42 23.92 30 Ix_AR3 ActiveIntronRegion 0 37.55 41.43 17.46 23.36 53.77 29.73 29.17 18.91 16.07 20.37 8.04 14.65 22.74 10.17 22.52 23.07 11.89 20.24 26.05 26.83 7.64 14.44 32.56 31 Ix_AR4 ActiveIntronRegion 0 73.67 86.26 63.56 100.95 85.34 40.38 77.38 87.58 61.98 55.89 17.52 35.30 20.44 28.39 66.84 39.93 39.55 45.23 55.68 64.39 35.30 49.24 49.42 32 Ix_SR3 SilentIntronRegion 0 16.86 29.01 30.38 48.77 38.48 20.49 32.11 30.00 31.50 17.67 10.34 12.81 10.86 26.50 44.68 36.39 42.38 46.19 46.58 26.05 26.46 32.95 49.57 33 E2_Aa NovelBoundary 0 180.62 248.84 276.99 324.10 183.02 207.72 328.00 258.27 229.80 236.12 56.22 110.14 122.39 28.25 87.77 226.52 125.20 362.92 274.64 266.34 130.72 77.28 185.24 34 ER2a ExonRegion 0 78.73 74.21 75.98 100.42 77.97 40.89 81.67 81.27 69.99 69.91 25.50 40.90 35.77 37.22 60.93 81.83 65.21 133.53 100.07 71.49 59.92 53.97 96.95