Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CTD-2666L21.2 Gene 0 5.93 10.77 16.44 4.37 8.17 5.54 8.79 13.88 11.70 14.16 0.48 0.78 1.17 3.00 2.55 6.85 5.66 36.65 27.09 20.61 2.40 2.92 4.67 2 415793 Transcript 0 2.69 5.89 0.87 2.66 2.75 1.83 7.09 2.46 4.62 3.12 0.25 0.94 1.55 0.92 0.31 4.70 3.28 3.43 2.09 4.85 0.77 1.48 0.97 3 440004 Transcript 0 0.00 3.09 11.24 1.96 4.33 0.00 6.27 2.51 3.24 4.78 0.00 0.00 0.00 2.47 0.00 0.00 0.00 30.39 0.00 12.46 0.00 0.00 0.00 4 426044 Transcript 0 9.83 8.34 23.96 4.52 9.32 6.21 8.01 19.42 17.39 23.36 0.44 1.84 0.29 3.92 2.88 4.94 10.47 56.00 62.84 40.27 2.69 6.81 8.85 5 451691 Transcript 0 1.39 1.89 0.53 0.70 2.48 2.92 3.23 1.70 1.94 1.48 0.73 0.11 0.26 0.15 0.13 2.40 0.97 2.55 1.04 2.07 0.07 0.06 0.62 6 IG23_SR1 SilentIntergenicRegion 0 3.28 7.02 4.58 13.68 9.04 3.13 21.36 9.70 4.22 12.71 1.54 9.75 1.84 2.40 1.87 9.69 1.28 3.38 1.33 2.07 0.71 4.63 0.93 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 5.22 16.73 16.62 4.18 12.85 14.57 10.61 12.51 7.11 16.53 1.39 2.56 0.00 2.45 5.15 5.57 1.91 64.88 72.99 21.43 2.89 4.90 12.78 9 E1_Ac KnownBoundary 0 13.11 38.81 44.71 8.02 28.61 28.39 24.29 31.75 18.23 34.81 0.00 0.00 0.00 2.35 4.45 11.19 3.93 136.26 145.04 57.21 5.93 14.94 23.90 10 ER1c ExonRegion 0 12.70 19.15 26.87 5.28 18.05 8.47 13.05 23.54 14.71 26.40 0.00 0.00 0.00 4.08 1.48 6.59 6.48 94.37 101.99 53.81 2.40 8.45 13.83 11 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E3a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 1.77 0.00 0.00 2.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E5a KnownJunction 0 10.08 6.51 10.64 5.86 14.43 0.00 6.32 11.87 17.13 21.92 0.00 0.00 0.00 0.00 4.45 0.00 13.74 40.62 95.91 39.76 0.00 7.90 8.62 14 E1a_E6a KnownJunction 0 0.00 3.09 11.24 1.96 4.33 0.00 6.27 2.51 3.24 4.78 0.00 0.00 0.00 2.47 0.00 0.00 0.00 30.39 0.00 12.46 0.00 0.00 0.00 15 ER2a ExonRegion 0 1.86 4.02 2.83 2.70 4.71 0.40 8.74 3.40 3.24 3.01 0.00 0.78 0.00 0.29 0.90 2.70 2.18 3.43 2.80 5.61 0.48 0.45 0.00 16 E2_Da NovelBoundary 0 10.74 5.92 12.30 6.53 7.64 0.00 0.00 4.15 5.30 4.16 0.00 0.00 0.00 0.00 4.45 3.25 8.51 10.61 8.66 3.20 0.00 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 2.17 7.04 4.37 2.97 1.07 1.06 7.15 4.62 7.22 6.67 0.00 0.00 3.20 0.96 1.70 9.67 3.35 3.27 1.32 9.69 0.00 3.13 1.81 19 E3_Da KnownBoundary 0 3.26 12.43 1.30 4.46 12.31 5.56 24.02 9.16 4.63 6.88 0.00 0.00 0.00 2.47 0.00 14.78 7.95 11.61 0.00 0.00 0.00 3.12 4.35 20 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER3b ExonRegion 0 5.39 8.42 1.75 5.32 5.50 3.67 12.41 4.93 9.23 3.98 0.51 1.87 3.09 1.84 0.63 9.39 6.55 6.86 4.19 9.70 1.54 2.95 1.94 22 E3_Ab KnownBoundary 0 13.63 17.30 3.08 3.40 20.71 0.00 14.79 3.86 7.52 2.82 0.00 0.00 5.84 0.00 0.00 0.00 0.00 2.24 0.00 5.88 3.03 0.00 0.00 23 ER3c ExonRegion 0 5.10 13.53 1.00 1.06 13.98 6.10 10.56 1.94 4.79 2.15 0.47 0.00 2.68 1.39 0.00 5.40 0.00 2.41 0.00 3.65 0.76 0.00 2.40 24 E3_Db NovelBoundary 0 2.67 9.67 0.00 0.00 3.82 6.64 18.37 4.07 5.96 3.92 0.00 0.00 0.00 0.00 0.00 7.52 0.00 1.78 0.00 3.26 0.00 0.00 3.59 25 E3c_E4a KnownJunction 0 3.48 3.35 0.00 0.00 0.00 7.95 2.21 2.55 3.27 2.53 2.68 0.00 0.00 0.00 0.00 4.36 0.00 6.63 0.00 0.00 0.00 0.00 0.00 26 ER3d ExonRegion 0 2.12 4.44 0.00 0.37 2.68 8.84 6.26 1.73 3.14 2.29 1.93 0.00 0.00 0.15 0.00 8.92 0.00 5.54 0.00 0.97 0.00 0.00 2.94 27 E4_Aa NovelBoundary 0 17.63 21.51 31.67 60.83 19.69 21.81 54.98 42.76 30.84 59.47 12.63 7.05 0.00 5.53 0.00 12.48 17.58 29.93 11.86 48.64 5.87 14.51 4.01 28 ER4a ExonRegion 0 2.29 1.44 0.85 1.86 9.99 3.23 5.42 4.25 3.95 2.50 0.50 0.00 1.81 0.63 0.00 0.85 4.63 2.22 4.47 7.89 0.00 0.00 1.37 29 E4_Da NovelBoundary 0 7.26 5.85 3.31 8.09 7.98 15.73 14.53 5.09 10.56 4.43 0.00 0.00 0.00 7.65 0.00 3.25 0.00 0.00 4.80 16.11 0.00 0.00 7.51 30 E5_Aa NovelBoundary 0 16.82 17.63 11.41 7.59 19.27 0.00 15.28 7.89 11.92 12.09 2.26 0.00 0.00 9.89 24.48 20.42 9.54 10.99 0.00 3.26 0.00 0.00 0.00 31 ER5a ExonRegion 0 13.55 12.47 22.81 8.10 16.51 5.76 12.49 17.01 22.85 22.89 0.88 0.81 0.00 7.66 4.92 8.49 10.61 34.84 50.71 32.39 3.46 3.98 7.50 32 E5_Da NovelBoundary 0 24.08 12.10 10.91 16.88 10.44 7.44 7.29 10.31 14.64 6.10 0.00 0.00 0.00 4.41 10.26 19.99 0.00 9.33 22.40 15.34 2.29 0.00 3.41 33 E5a_E6a KnownJunction 0 10.08 5.66 32.67 0.00 0.00 12.78 7.38 27.48 12.15 23.96 0.00 6.30 0.00 2.30 0.00 3.85 9.44 93.06 67.58 65.96 3.15 12.06 12.46 34 E6_Aa NovelBoundary 0 10.67 0.00 1.66 3.50 8.66 2.90 8.44 2.55 2.81 2.90 0.00 0.00 0.00 0.00 4.45 8.20 0.00 8.66 0.00 10.93 9.14 0.00 7.77 35 ER6a ExonRegion 0 8.70 19.76 29.38 5.82 9.93 9.14 8.91 25.10 15.49 20.52 0.29 1.09 0.57 3.11 5.59 8.53 6.33 72.20 38.84 36.49 3.99 3.96 5.68 36 E6_Da KnownBoundary 0 9.85 3.35 50.29 10.06 11.12 9.60 13.96 31.63 8.54 22.83 0.00 0.00 0.00 2.12 0.00 20.68 13.18 111.14 52.80 24.10 8.83 8.45 23.47 37 ER6b ExonRegion 0 5.60 8.70 29.69 4.11 6.33 6.29 5.86 21.31 17.41 24.67 0.88 0.25 1.18 5.71 2.13 7.43 8.10 55.48 37.15 22.98 4.15 3.29 6.82 38 IG24 Intergenic 0 9.95 25.48 44.16 14.25 40.23 16.77 14.27 26.95 16.84 15.96 0.00 0.67 0.73 5.66 3.68 8.76 7.45 43.17 47.90 22.26 2.62 3.79 3.13 39 IG24_AR1 ActiveIntergenicRegion 0 4.18 14.41 39.88 9.67 26.73 12.57 10.77 24.84 16.04 13.30 0.00 0.41 0.45 6.10 4.82 7.60 7.29 34.05 24.79 22.99 2.56 1.21 3.75 40 IG24_SR1 SilentIntergenicRegion 0 17.89 41.19 52.68 21.01 60.04 23.25 19.68 31.53 19.04 20.42 0.00 1.04 1.13 5.51 2.51 10.84 8.18 57.69 80.30 22.94 2.88 7.29 2.57