Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF69 Gene 0 21.58 24.20 27.55 17.95 29.70 11.49 29.88 18.82 19.85 31.27 0.34 5.57 5.99 10.15 9.27 18.52 14.19 51.09 22.40 60.75 3.03 12.25 19.98 2 429654 Transcript 0 11.88 7.62 6.48 7.23 8.67 3.78 14.49 6.60 7.10 9.70 0.00 1.03 2.37 5.05 1.24 8.32 7.18 26.12 13.96 31.42 1.63 8.56 12.26 3 445911 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 340180 Transcript 0 26.74 30.23 31.79 12.63 25.86 8.02 16.46 15.98 15.26 24.10 0.53 4.85 4.35 5.64 16.14 12.44 8.34 24.80 13.67 22.03 3.26 5.71 9.76 5 IG13_SR1 SilentIntergenicRegion 0 10.96 12.25 5.26 0.87 11.74 1.61 8.40 9.35 8.30 6.48 0.00 0.00 1.52 0.79 0.60 2.75 1.05 3.23 4.86 4.27 0.23 1.10 1.09 6 ER1a ExonRegion 0 9.19 0.64 3.29 0.00 14.60 6.44 13.58 1.28 1.62 1.18 0.00 0.00 0.00 5.29 0.00 8.41 1.70 11.72 4.37 8.27 0.00 2.02 13.09 7 E1_Ab KnownBoundary 0 37.34 5.46 3.19 0.00 41.00 14.76 44.21 2.30 4.37 1.29 0.00 0.00 0.00 16.36 0.00 22.05 7.29 13.72 16.38 32.28 2.59 3.00 37.30 8 ER1b ExonRegion 0 27.40 3.46 10.23 5.60 36.66 26.22 27.45 1.73 3.04 9.58 0.00 0.00 0.00 13.56 3.06 25.87 9.37 62.22 39.26 35.65 0.66 0.96 46.27 9 E1_Ac KnownBoundary 0 10.74 3.35 12.68 11.79 23.09 30.44 23.85 2.51 2.86 17.89 0.00 0.00 0.00 7.18 11.13 23.33 4.77 94.22 53.93 27.68 2.53 0.00 40.63 10 ER1c ExonRegion 0 4.77 1.52 7.92 7.24 6.58 8.72 5.52 1.90 2.97 11.60 0.00 0.00 0.00 5.34 3.14 6.97 3.93 45.23 8.34 23.68 1.53 2.80 9.84 11 E1_Da NovelBoundary 0 0.00 3.16 17.21 1.50 3.65 0.00 4.20 0.00 6.08 5.45 0.00 0.00 0.00 2.94 0.00 3.33 4.49 13.68 3.67 26.01 3.15 0.00 3.41 12 E1a_E2a KnownJunction 0 13.78 3.16 1.83 3.86 0.00 0.00 2.03 2.55 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 4.77 6.88 7.62 3.26 0.00 5.76 0.00 13 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.18 0.00 6.74 0.00 0.00 0.00 4.71 8.90 0.00 0.00 2.16 4.80 5.11 0.00 6.12 0.00 14 I1 Intron 0 7.96 11.83 20.60 13.28 12.27 3.34 12.92 12.30 11.90 17.25 0.11 1.12 2.35 2.75 6.25 9.08 5.34 40.13 13.48 30.76 1.46 2.91 9.32 15 I1_SR1 SilentIntronRegion 0 2.54 7.09 11.29 6.37 5.36 2.60 7.35 5.58 5.26 7.92 0.00 0.37 0.36 1.39 3.31 2.99 2.55 25.85 7.41 16.73 1.36 0.74 6.67 16 I1_AR1 ActiveIntronRegion 0 11.89 14.91 30.27 18.80 17.47 4.59 17.86 17.26 17.07 25.47 0.06 1.21 3.09 4.04 9.12 14.42 7.72 62.50 19.77 45.18 1.78 4.00 12.26 17 E2_Aa NovelBoundary 0 13.11 9.74 20.58 9.56 8.32 8.12 6.76 4.97 13.08 10.80 0.00 0.00 0.00 0.00 5.07 15.55 4.77 30.22 20.71 25.63 6.05 2.82 28.94 18 ER2a ExonRegion 0 11.22 15.75 6.87 8.40 1.80 0.00 12.22 8.40 7.55 8.72 0.00 0.00 3.60 5.63 0.13 6.29 7.37 30.34 19.48 32.81 3.79 12.74 16.12 19 E2_Ab KnownBoundary 0 172.85 96.04 146.56 100.05 72.16 39.69 87.44 191.65 158.16 197.06 75.55 19.81 54.54 94.89 49.08 210.97 149.42 253.03 92.80 297.28 59.86 75.93 132.82 20 ER2b ExonRegion 0 22.65 17.53 24.89 19.24 26.63 2.88 27.82 18.05 18.01 24.58 0.00 3.56 0.50 11.79 4.84 12.88 16.50 60.16 32.38 39.61 1.10 8.41 24.12 21 E2a_E3a KnownJunction 0 26.89 2.50 25.10 19.15 44.40 10.73 56.35 15.61 17.82 34.81 0.00 7.65 0.00 21.13 4.45 8.63 17.86 66.04 27.48 38.93 2.78 14.76 28.77 22 ER3a ExonRegion 0 28.17 14.84 17.62 14.52 71.94 29.58 65.29 15.41 21.30 38.11 0.00 1.70 0.00 11.61 12.70 13.89 24.03 48.47 20.94 39.76 3.18 12.77 30.86 23 E3a_E4a KnownJunction 0 24.97 6.25 13.57 6.39 23.26 24.87 45.36 23.25 23.15 29.68 0.00 0.00 0.00 4.89 0.00 29.99 21.41 19.81 17.04 27.87 0.00 5.69 11.78 24 ER4a ExonRegion 0 17.84 8.73 25.33 15.65 20.19 10.53 27.91 27.84 22.36 37.69 0.00 5.60 4.85 13.50 9.70 21.38 20.33 56.24 25.96 55.83 4.57 15.83 21.02 25 E4_Da KnownBoundary 0 203.59 90.44 90.15 127.49 69.95 24.59 89.83 154.56 134.29 163.45 41.17 26.56 50.65 33.49 12.11 127.74 99.21 127.55 36.42 120.42 15.63 70.42 93.13 26 E4a_E5a KnownJunction 0 16.60 5.92 9.05 1.50 0.00 0.00 0.00 4.07 5.90 6.58 0.00 0.00 0.00 0.00 14.46 4.19 3.55 4.44 7.44 0.00 2.90 0.00 0.00 27 E4_Db KnownBoundary 0 333.91 110.44 110.73 31.86 146.10 56.79 165.35 115.50 91.75 123.35 5.16 22.81 138.95 39.73 12.36 166.96 85.27 136.71 154.64 142.73 5.99 83.40 72.22 28 ER4b ExonRegion 0 49.67 17.90 31.70 17.72 14.45 11.00 28.42 22.01 17.54 30.05 0.00 2.89 8.44 9.10 8.70 25.76 13.20 62.33 22.72 80.57 2.94 24.03 30.15 29 ER4c ExonRegion 0 13.34 10.95 13.91 16.64 18.29 8.66 30.11 14.16 19.21 27.23 0.00 4.11 5.90 9.29 4.84 18.58 14.90 55.54 24.35 81.36 2.73 13.73 19.82 30 E4_Dc NovelBoundary 0 270.20 292.71 248.16 314.88 125.47 204.20 335.11 301.32 375.40 316.08 126.45 40.36 64.44 90.06 84.68 389.21 352.78 603.35 285.84 624.02 242.79 90.32 302.01 31 I4_SR2 SilentIntronRegion 0 5.99 9.22 6.57 6.38 19.89 6.32 11.86 3.13 4.12 6.96 0.00 1.75 1.73 2.52 3.32 12.08 1.45 7.72 5.40 6.99 1.45 2.74 3.06 32 E5_Aa NovelBoundary 0 0.00 6.05 6.45 3.83 15.70 5.68 35.51 6.28 6.39 7.58 0.00 0.00 6.01 9.59 5.19 7.95 8.51 9.82 0.00 14.38 0.00 8.51 0.00 33 ER5a ExonRegion 0 36.89 54.55 54.54 23.76 51.71 16.04 32.93 27.90 24.61 41.62 1.07 9.71 8.70 11.28 17.83 20.69 13.13 45.17 19.90 44.06 3.62 11.42 19.52