Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF833 Gene 0 10.67 49.92 31.48 27.03 40.23 11.53 42.65 33.45 13.52 31.22 1.67 10.73 7.59 11.08 7.82 18.80 14.47 42.77 11.71 54.73 1.90 2.20 4.26 2 344893 Transcript 0 7.43 19.86 7.36 7.72 13.45 8.61 13.58 10.12 4.59 7.96 0.96 3.56 5.07 3.98 3.87 8.67 6.22 17.97 6.28 18.25 1.82 1.14 4.50 3 431363 Transcript 0 6.41 46.56 37.38 39.58 68.51 15.29 80.59 40.65 16.93 45.18 4.22 14.96 8.62 12.52 7.45 21.04 17.03 55.20 17.60 76.80 1.29 1.03 1.81 4 424938 Transcript 0 0.00 0.63 0.02 0.10 0.96 0.01 0.00 0.06 0.04 0.01 0.00 1.17 1.26 0.00 0.67 0.02 0.00 0.06 2.08 1.34 0.00 0.00 0.00 5 ER1a ExonRegion 0 3.57 28.96 4.40 0.89 16.01 19.94 42.41 0.00 0.82 4.81 0.02 3.22 0.27 4.95 0.86 17.56 9.74 16.34 2.69 33.51 2.80 0.00 2.50 6 E1a_E2a KnownJunction 0 0.00 2.89 1.63 1.86 8.32 8.69 0.00 0.00 5.12 1.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.46 0.00 5.88 0.00 0.00 0.00 7 E1a_E4a NovelJunction 0 0.00 26.77 9.02 10.99 0.00 2.84 18.77 7.23 1.10 21.30 0.00 0.00 0.00 0.00 0.00 6.49 8.79 24.66 0.00 6.52 2.41 0.00 0.00 8 E2_Aa NovelBoundary 0 40.45 30.32 23.09 24.27 84.47 27.88 87.18 31.54 35.45 21.76 2.32 18.16 13.31 2.47 9.77 16.49 32.45 43.15 16.66 49.98 21.44 8.21 20.15 9 ER2a ExonRegion 0 35.98 32.02 7.57 4.39 30.87 42.73 59.32 5.34 3.78 5.56 6.29 17.67 40.07 18.58 27.55 41.75 29.92 23.51 38.30 52.69 20.07 11.25 47.20 10 E2_Da NovelBoundary 0 2420.65 2760.10 3954.80 3965.33 2453.14 1663.87 3389.89 4592.78 4187.98 3983.52 1055.53 381.57 622.20 444.17 804.01 2143.71 2419.63 4537.07 1936.81 3068.15 2054.16 1199.93 2363.88 11 E2a_E3a KnownJunction 0 0.00 0.00 1.57 2.06 0.00 0.00 0.00 0.00 1.50 1.67 0.00 0.00 0.00 3.00 0.00 0.00 0.00 9.08 0.00 10.93 0.00 0.00 0.00 12 E2a_E4a NovelJunction 0 0.00 2.70 6.68 0.00 0.00 0.00 2.16 0.00 1.77 1.42 0.00 0.00 0.00 0.00 0.00 8.12 0.00 16.33 4.61 12.08 0.00 0.00 8.71 13 ER3a ExonRegion 0 0.54 4.11 0.60 2.00 1.54 3.36 0.25 0.33 0.00 3.44 0.25 0.46 0.50 1.45 4.44 0.38 2.74 10.61 0.41 19.01 0.00 0.00 0.69 14 E3a_E4a KnownJunction 0 0.00 5.33 0.00 1.43 4.33 4.43 1.72 0.00 0.00 4.70 0.00 0.00 0.00 0.00 0.00 0.00 4.77 9.45 0.00 12.02 0.00 0.00 0.00 15 ER4a ExonRegion 0 4.23 4.65 1.40 2.34 4.20 3.67 1.32 3.46 1.76 9.67 1.38 0.00 0.00 0.00 0.00 0.00 3.30 9.24 3.19 14.59 0.00 0.00 0.00 16 ER4b ExonRegion 0 6.49 41.16 35.93 19.61 28.99 9.75 20.38 27.61 8.54 36.45 3.69 3.03 1.99 9.53 5.37 28.04 15.68 70.52 15.95 76.52 3.12 3.54 3.25 17 E4a_E5a KnownJunction 0 3.70 87.35 70.58 29.43 45.59 12.55 32.64 41.40 9.58 63.37 5.05 0.00 0.00 22.54 8.90 23.67 26.83 95.84 9.51 131.29 5.75 0.00 4.35 18 ER5a ExonRegion 0 3.50 74.61 56.83 35.41 49.39 14.43 46.38 32.39 9.15 64.64 1.65 6.32 0.00 13.77 5.14 43.95 20.73 78.94 7.00 98.08 1.37 0.00 7.70 19 E5a_E6a KnownJunction 0 6.37 99.00 54.85 47.98 76.91 20.67 57.59 39.35 10.59 71.45 2.68 12.60 0.00 11.77 4.45 35.12 18.14 64.05 12.14 102.40 0.00 0.00 0.00 20 ER6a ExonRegion 0 11.93 91.11 60.54 34.68 61.94 19.68 72.08 52.51 18.36 57.90 3.71 17.65 6.60 23.52 12.34 21.06 17.36 86.21 16.22 109.26 2.08 3.71 4.60 21 E6_Da KnownBoundary 0 240.26 221.41 262.68 227.54 245.16 60.93 281.01 336.15 205.64 363.58 33.80 116.14 51.13 70.87 57.61 181.41 116.32 217.92 112.85 303.41 29.28 86.95 38.58 22 E6a_E7a KnownJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER6b ExonRegion 0 6.41 46.56 37.38 39.58 68.51 15.29 80.59 40.65 16.93 45.18 4.22 14.96 8.62 12.52 7.45 21.04 17.03 55.20 17.60 76.80 1.29 1.03 1.81 24 E6_Db NovelBoundary 0 3.63 21.38 42.52 16.02 28.78 5.56 74.77 29.08 9.64 21.49 2.58 0.00 0.00 6.77 0.00 12.13 13.09 52.89 8.19 40.65 0.00 0.00 4.35 25 I6 Intron 0 4.81 26.30 22.24 14.83 24.35 7.11 29.22 20.28 7.97 25.63 0.72 5.15 2.87 3.63 3.07 7.45 4.11 43.10 6.22 40.96 1.00 0.76 1.65 26 I6_SR1 SilentIntronRegion 0 6.18 29.24 24.24 16.21 30.77 8.47 37.76 20.63 7.88 25.70 0.62 7.98 4.46 4.11 3.98 6.65 4.18 26.88 5.16 43.55 0.45 0.93 1.31 27 I6_AR1 ActiveIntronRegion 0 2.10 20.17 17.88 11.35 9.60 2.28 19.18 14.51 9.66 24.26 0.87 1.55 1.43 2.63 2.24 7.37 0.99 69.14 11.36 38.94 1.30 0.25 1.62 28 I6_SR2 SilentIntronRegion 0 3.57 23.69 20.49 13.68 18.84 6.19 20.56 20.69 7.85 25.74 0.82 2.32 1.20 3.21 2.10 8.40 4.46 58.64 6.76 38.20 1.61 0.63 2.07 29 I6 Intron 0 4.06 24.93 14.47 10.11 10.90 3.63 11.94 11.53 5.25 13.77 0.09 2.10 2.22 5.53 4.40 12.59 5.75 33.61 6.36 21.63 1.99 1.11 3.45 30 I6_SR1 SilentIntronRegion 0 4.54 30.50 20.36 13.76 13.67 4.30 15.44 16.50 6.68 16.11 0.08 2.62 2.14 5.56 3.34 12.82 5.12 42.45 5.75 27.97 2.86 0.70 3.32 31 I6_AR1 ActiveIntronRegion 0 5.27 8.07 10.36 4.19 3.81 5.33 7.99 7.62 2.86 11.99 0.00 1.02 0.00 6.89 4.44 9.68 6.58 43.93 7.22 23.23 1.91 0.59 1.38 32 I6_SR2 SilentIntronRegion 0 3.60 22.82 10.84 8.20 9.73 3.01 9.95 8.52 4.51 12.34 0.11 1.86 2.50 5.38 5.14 12.74 6.10 26.51 6.71 17.12 1.40 1.44 3.76 33 E7_Aa NovelBoundary 0 13.71 142.67 38.29 31.70 31.58 12.32 15.50 18.44 6.16 24.58 2.68 12.60 0.00 9.83 14.59 12.22 0.00 20.64 4.42 37.07 0.00 2.57 4.35 34 ER7a ExonRegion 0 4.61 76.91 5.48 10.63 10.33 5.57 12.45 11.67 4.50 8.48 0.00 2.44 10.26 4.60 5.77 8.09 3.07 19.21 7.29 21.66 0.00 1.05 1.10 35 E7_Da NovelBoundary 0 3.33 57.95 24.95 34.39 16.98 7.15 19.30 11.87 2.72 22.89 0.00 0.00 0.00 11.60 8.90 20.51 9.54 8.75 4.80 59.51 0.00 3.12 4.10 36 E7a_E8a KnownJunction 0 6.67 12.96 4.29 11.12 11.80 0.00 3.75 10.72 2.78 0.00 0.00 6.30 0.00 2.47 0.00 8.03 0.00 11.73 4.80 0.00 0.00 0.00 3.76 37 E8_Aa NovelBoundary 0 6.37 35.13 30.69 14.62 28.10 10.85 48.09 24.07 15.89 12.57 0.00 6.00 0.00 14.95 6.30 7.95 4.77 22.97 4.71 40.91 0.00 0.00 0.00 38 ER8a ExonRegion 0 11.23 45.12 26.51 22.49 27.96 10.94 23.53 22.52 7.88 24.19 0.00 8.41 9.78 10.87 9.44 24.90 15.66 66.83 9.64 38.00 1.74 2.01 6.51 39 E8_Da NovelBoundary 0 0.00 15.46 88.47 136.11 8.06 0.00 16.91 129.51 61.54 111.93 0.00 15.00 13.31 9.48 4.45 8.46 26.74 69.06 0.00 47.17 2.29 0.00 8.54 40 E8a_E9a KnownJunction 0 16.82 20.13 8.01 9.82 34.13 7.15 17.58 19.96 9.06 11.90 0.00 0.00 6.17 4.59 0.00 11.36 4.02 15.59 9.60 17.64 0.00 0.00 0.00 41 I8 Intron 0 5.08 16.17 11.23 6.09 6.02 0.00 9.73 4.25 3.59 5.64 0.00 2.79 3.15 7.11 5.84 18.30 5.94 18.60 6.69 27.77 1.32 0.31 2.64 42 I8_SR1 SilentIntronRegion 0 5.09 16.21 11.26 6.11 6.04 0.00 9.76 4.26 3.60 5.66 0.00 2.80 3.15 7.13 5.85 18.35 5.96 18.66 6.71 27.85 1.33 0.31 2.65 43 E9_Aa NovelBoundary 0 14.67 29.21 27.53 12.49 3.23 0.00 17.93 13.14 6.57 10.74 0.00 18.91 0.00 16.78 18.42 19.91 26.37 40.62 0.00 38.29 5.31 2.63 7.68 44 ER9a ExonRegion 0 9.20 39.84 16.41 20.14 30.11 7.35 22.27 26.84 12.77 23.10 1.61 3.00 1.85 10.74 4.25 21.20 13.93 42.44 6.57 43.57 0.88 0.84 1.62 45 E9_Da NovelBoundary 0 0.00 3.35 10.97 10.19 3.90 0.00 7.99 7.02 3.91 0.00 0.00 0.00 6.82 7.00 0.00 12.90 9.26 16.91 0.00 17.96 2.53 0.00 4.10 46 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E9a_E11a KnownJunction 0 17.86 23.94 19.48 17.18 19.69 7.95 10.29 39.18 16.29 15.93 5.37 0.00 0.00 0.00 0.00 4.36 4.77 43.57 9.60 3.26 0.00 0.00 0.00 48 E10_Aa NovelBoundary 0 0.00 13.68 8.16 8.12 19.44 13.12 11.04 1.64 0.00 2.98 0.00 11.40 0.00 2.47 10.63 8.29 9.16 13.39 9.04 20.77 2.53 6.06 0.00 49 ER10a ExonRegion 0 0.00 1.88 0.05 0.29 2.88 0.04 0.00 0.17 0.12 0.02 0.00 3.50 3.79 0.00 2.01 0.06 0.00 0.18 6.25 4.01 0.00 0.00 0.00 50 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 I10_SR1 SilentIntronRegion 0 2.34 7.50 7.18 5.74 2.96 1.80 11.55 3.80 2.49 3.36 0.00 4.26 8.32 6.21 6.80 9.86 4.46 7.68 3.91 18.04 1.90 1.28 2.17 52 E11_Aa NovelBoundary 0 7.19 6.64 6.98 12.05 4.24 0.00 16.61 4.48 3.04 9.37 0.00 5.70 12.66 12.83 0.00 35.12 9.16 5.64 0.00 36.05 5.87 2.69 8.62 53 ER11a ExonRegion 0 15.50 56.75 32.90 29.15 37.41 6.52 33.60 41.15 17.76 28.46 0.41 9.86 6.63 9.44 6.47 16.05 13.59 25.66 9.91 45.04 1.11 2.42 2.46 54 E11_Da KnownBoundary 0 3.78 51.24 56.38 35.39 60.44 2.78 29.63 38.20 18.17 40.16 2.68 0.00 0.00 4.77 4.45 6.66 17.39 12.77 4.80 35.86 0.00 8.57 0.00 55 ER11b ExonRegion 0 2.44 17.73 22.14 21.86 19.08 6.04 17.49 26.71 10.76 19.61 0.11 11.30 3.88 5.14 6.13 4.87 9.08 8.98 2.41 26.37 0.89 1.70 1.19