Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF763 Gene 0 34.49 10.31 8.84 10.71 37.79 10.22 11.95 22.54 16.57 15.86 2.73 7.04 12.14 14.17 15.84 21.59 15.24 11.64 12.05 11.65 2.56 4.36 4.89 2 343949 Transcript 0 16.20 4.63 5.45 5.86 20.37 5.50 4.66 11.16 6.12 7.13 0.51 1.33 4.55 6.00 8.00 11.49 8.31 5.86 6.04 5.22 0.86 0.68 2.12 3 358987 Transcript 0 0.00 0.00 8.46 1.76 3.90 0.00 0.00 12.53 4.98 5.59 0.00 0.00 6.49 4.65 0.00 3.59 11.97 0.00 4.33 0.00 0.00 2.82 0.00 4 481745 Transcript 0 14.65 3.92 3.57 4.39 13.20 1.29 2.60 9.48 5.50 4.30 0.00 0.00 10.89 2.63 5.30 16.78 6.44 9.84 4.75 6.40 3.41 2.92 2.16 5 IG15_SR1 SilentIntergenicRegion 0 12.24 4.28 3.84 7.46 18.29 1.93 8.35 9.48 6.77 4.49 2.03 7.50 21.18 2.96 0.00 14.06 6.94 4.34 10.05 1.12 0.00 2.19 1.54 6 IG15_SR2 SilentIntergenicRegion 0 13.44 14.84 9.27 8.77 15.08 4.65 12.48 12.29 5.48 10.07 1.56 6.97 15.12 6.58 13.44 16.22 7.97 9.14 6.52 7.91 1.20 1.68 2.14 7 ER1a ExonRegion 0 2.48 1.26 0.00 3.71 9.41 5.82 1.51 4.29 2.04 3.36 0.00 0.00 0.00 0.00 1.10 1.84 5.69 5.10 0.00 2.35 0.00 0.00 0.51 8 ER1b ExonRegion 0 5.37 0.52 3.32 4.94 8.77 3.04 5.42 8.09 5.96 8.35 0.00 0.00 0.51 5.14 1.37 2.83 9.42 7.95 0.89 5.08 3.48 1.07 1.05 9 E1a_E2b KnownJunction 0 0.00 0.00 1.77 2.06 0.00 0.00 0.00 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 0.00 0.00 0.00 3.07 0.00 0.00 0.00 10 E1a_E2c KnownJunction 0 0.00 0.00 8.46 1.76 3.90 0.00 0.00 12.53 4.98 5.59 0.00 0.00 6.49 4.65 0.00 3.59 11.97 0.00 4.33 0.00 0.00 2.82 0.00 11 E2_Aa NovelBoundary 0 53.42 6.71 10.85 19.54 19.35 0.00 14.71 9.16 12.33 9.37 0.00 0.00 19.80 2.47 19.41 34.01 7.20 10.49 15.72 14.76 3.15 0.00 7.94 12 ER2a ExonRegion 0 14.65 3.92 3.57 4.39 13.20 1.29 2.60 9.48 5.50 4.30 0.00 0.00 10.89 2.63 5.30 16.78 6.44 9.84 4.75 6.40 3.41 2.92 2.16 13 E2_Ab KnownBoundary 0 14.67 0.00 5.20 0.00 8.66 2.21 0.00 8.87 0.00 1.67 0.00 0.00 6.17 2.41 9.64 20.93 9.07 6.18 3.95 2.68 0.00 2.82 0.00 14 E2_Ac KnownBoundary 0 26.30 16.18 1.83 4.36 3.90 0.00 0.00 5.05 4.31 0.00 0.00 0.00 0.00 2.35 0.00 23.07 4.77 4.27 4.80 8.95 3.15 2.39 0.00 15 ER2b ExonRegion 0 23.75 14.24 18.38 6.97 8.32 1.43 0.00 16.90 9.19 11.09 0.00 0.00 5.21 3.79 6.12 33.02 14.67 23.61 6.72 11.82 2.20 4.40 0.00 16 ER2c ExonRegion 0 34.49 14.59 13.56 8.66 22.21 3.48 9.72 22.59 16.92 14.51 1.84 0.00 7.52 10.76 11.67 28.64 12.21 25.53 9.96 7.60 3.53 7.11 7.04 17 E2a_E3a KnownJunction 0 18.97 9.34 8.01 9.42 48.81 2.78 5.96 11.79 17.56 9.83 4.74 0.00 6.82 18.19 9.15 4.36 30.86 6.92 13.18 8.95 2.97 11.27 7.26 18 E2a_E4a NovelJunction 0 0.00 0.00 3.25 2.03 20.29 0.00 1.94 1.93 1.79 1.05 0.00 0.00 0.00 0.00 0.00 0.00 8.79 0.00 0.00 0.00 0.00 0.00 0.00 19 ER3a ExonRegion 0 22.48 8.33 5.97 10.81 48.69 19.99 17.21 10.60 18.04 10.53 1.62 5.54 19.91 10.60 9.42 11.64 17.75 5.88 9.14 9.38 4.26 6.83 5.34 20 E3a_E4a KnownJunction 0 13.78 6.12 6.03 4.59 27.33 8.18 14.66 13.39 13.02 12.28 2.58 12.60 19.80 23.13 17.68 15.04 17.30 2.07 13.46 0.00 2.84 5.82 0.00 21 ER4a ExonRegion 0 25.81 11.27 8.26 10.72 24.67 10.04 9.24 28.18 23.95 24.44 5.81 8.04 22.28 16.01 24.44 33.62 23.70 14.27 19.75 9.41 3.58 12.97 10.90 22 E4_Da KnownBoundary 0 163.73 99.19 59.49 59.87 63.92 36.63 108.99 94.92 110.73 134.12 38.33 74.12 94.64 58.04 43.14 117.83 99.21 64.96 47.53 143.49 42.50 69.93 78.53 23 ER4b ExonRegion 0 42.19 11.89 9.00 12.87 47.15 13.26 15.28 26.31 19.38 18.12 3.72 11.13 12.40 17.47 18.03 21.47 15.90 10.57 13.00 15.08 1.96 3.95 4.62 24 E4_Db KnownBoundary 0 128.10 47.10 113.36 93.13 56.79 15.67 33.78 148.61 116.06 144.87 2.68 27.01 0.00 35.02 35.97 84.51 36.00 112.05 21.55 29.98 9.45 21.86 16.22 25 ER4c ExonRegion 0 46.11 12.62 14.58 11.81 51.70 10.67 12.48 26.65 16.30 18.02 1.52 3.98 13.64 18.00 22.91 28.53 19.23 12.47 18.13 10.24 2.59 2.05 5.85 26 IG16_AR1 ActiveIntergenicRegion 0 14.21 6.16 3.19 7.41 18.34 0.85 4.62 8.97 4.49 4.78 0.45 0.83 3.98 8.57 10.00 12.35 2.31 0.64 0.74 1.97 1.54 0.49 1.37