Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF443 Gene 0 7.76 13.04 8.46 8.92 12.29 6.69 20.60 7.97 5.25 14.72 6.95 5.18 3.45 11.01 3.73 7.16 12.41 11.80 6.08 19.31 1.10 1.00 2.18 2 411622 Transcript 0 0.00 0.00 2.54 0.00 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 301547 Transcript 0 0.00 0.00 0.49 0.00 0.00 0.00 0.53 0.00 0.00 0.00 0.00 0.00 1.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.13 0.00 0.00 4 436821 Transcript 0 2.13 0.78 0.99 0.46 0.03 1.89 5.41 1.36 1.70 1.63 0.15 0.67 1.80 0.03 0.58 2.53 2.60 0.00 0.00 1.62 0.00 0.00 0.47 5 ER1a ExonRegion 0 2.48 4.97 1.41 0.87 6.83 9.37 10.13 2.05 1.76 3.34 0.50 0.00 0.10 11.47 1.45 4.98 13.60 5.97 3.74 8.49 1.22 0.00 3.22 6 E1_Ab KnownBoundary 0 12.89 6.18 4.35 1.66 4.24 8.06 5.61 4.15 1.39 8.86 4.37 0.00 0.00 21.37 4.70 3.33 25.25 25.99 0.00 6.52 0.00 0.00 0.00 7 ER1b ExonRegion 0 11.48 19.59 1.82 4.54 9.50 17.85 32.39 3.54 3.71 11.77 5.91 0.00 3.53 20.40 7.24 8.15 28.50 9.87 8.59 17.61 1.56 1.95 0.35 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 I1_AR1 ActiveIntronRegion 0 4.82 7.60 3.94 10.01 6.30 1.50 9.58 16.64 7.64 9.87 5.05 3.25 2.35 3.04 1.92 2.64 2.43 5.73 2.46 17.65 1.06 1.33 1.34 10 ER2a ExonRegion 0 0.97 1.36 2.23 4.73 4.23 1.73 4.88 7.68 4.40 14.44 9.54 2.76 7.83 22.76 3.77 10.98 22.30 19.23 5.89 17.26 2.20 0.59 3.26 11 E2a_E3a KnownJunction 0 6.52 11.31 2.63 11.62 8.15 7.95 28.18 22.18 15.80 25.20 13.85 0.00 0.00 24.78 5.19 13.07 20.85 27.07 26.54 30.62 0.00 0.00 4.27 12 ER3a ExonRegion 0 1.60 8.20 6.71 16.09 15.88 20.32 29.95 18.22 12.86 26.47 9.73 13.77 19.84 26.49 7.99 14.03 16.23 22.84 18.22 28.43 0.00 4.00 1.06 13 E3_Da KnownBoundary 0 0.00 0.00 0.00 3.33 0.00 2.67 2.25 3.90 1.45 5.00 2.32 13.05 0.00 0.00 0.00 0.00 4.77 0.00 0.00 8.88 0.00 0.00 4.35 14 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3b ExonRegion 0 0.63 1.56 1.99 0.92 0.06 3.79 10.81 2.73 2.00 3.26 0.30 1.35 3.60 0.05 1.16 5.05 1.47 0.00 0.00 3.24 0.00 0.00 0.95 16 E3_Db NovelBoundary 0 3.41 9.27 8.84 6.93 0.00 2.67 24.64 3.61 5.03 11.85 0.00 0.00 0.00 0.00 0.00 3.59 0.00 1.91 4.80 9.01 0.00 0.00 0.00 17 E3b_E4a KnownJunction 0 3.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 18 ER4a ExonRegion 0 16.42 31.54 16.98 24.63 29.15 13.49 43.04 22.50 12.11 37.85 21.95 13.22 6.02 24.74 8.85 15.97 32.21 28.03 15.30 57.84 3.20 1.75 5.82 19 E4_Da KnownBoundary 0 145.06 86.17 102.07 143.94 109.00 60.31 130.77 111.60 91.14 116.47 39.12 73.22 35.22 53.45 58.35 97.75 105.19 90.37 60.52 123.04 30.15 23.09 25.87 20 ER4b ExonRegion 0 12.27 18.61 14.08 11.61 17.82 7.89 29.62 9.33 7.05 18.72 7.22 7.16 3.70 11.77 4.31 8.67 12.03 14.78 6.96 21.41 0.99 1.44 2.57 21 E4_Db KnownBoundary 0 3.41 0.00 1.60 1.37 12.56 2.73 8.26 2.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4b_E4b KnownJunction 0 0.00 0.00 2.54 0.00 3.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER4c ExonRegion 0 0.00 0.00 0.76 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4_Ab KnownBoundary 0 16.30 8.62 5.41 3.13 14.86 0.00 5.92 2.14 1.65 4.00 2.32 0.00 11.69 2.59 0.00 3.59 4.02 4.10 0.00 2.75 2.72 2.69 0.00 25 ER4d ExonRegion 0 0.00 0.00 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 E4_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 ER4e ExonRegion 0 0.00 0.00 0.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00