Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF491 Gene 0 15.38 33.49 25.43 27.23 29.93 3.15 25.75 18.25 21.86 25.93 0.00 3.07 3.06 5.55 5.62 16.20 5.77 20.08 13.77 35.14 6.04 3.01 6.57 2 479762 Transcript 0 0.80 1.57 1.88 2.07 1.19 0.39 2.23 2.15 2.18 1.84 0.00 0.00 0.81 1.65 0.72 1.04 1.16 2.90 0.45 5.09 0.77 0.44 0.43 3 323169 Transcript 0 13.85 28.17 19.92 23.48 34.37 4.88 27.05 16.80 18.31 23.34 0.00 2.72 2.31 5.14 9.74 19.99 3.98 17.50 13.36 33.42 6.94 3.45 4.87 4 450087 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.64 0.00 0.00 0.00 0.00 0.00 5 492230 Transcript 0 2.19 5.46 1.55 2.32 1.11 0.00 2.20 0.80 4.19 2.48 0.00 0.00 0.00 0.97 1.68 0.00 0.68 1.15 0.00 6.82 1.37 0.00 0.30 6 455048 Transcript 0 24.60 15.00 21.82 36.19 42.53 0.00 14.26 25.71 12.99 28.85 0.00 7.35 0.00 4.71 4.33 4.02 4.21 13.93 8.75 37.65 2.72 8.27 0.00 7 ER1a ExonRegion 0 0.81 0.00 1.40 0.00 1.03 0.00 0.01 0.00 0.00 0.66 0.00 0.00 0.00 0.21 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.00 0.07 8 E1a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2a ExonRegion 0 9.77 4.50 2.79 3.74 8.08 2.18 10.48 2.98 3.89 3.61 0.00 0.00 0.00 4.22 10.00 12.39 7.30 5.27 7.39 5.57 8.02 1.02 2.25 10 E2_Ab KnownBoundary 0 24.15 6.31 7.24 2.06 12.22 0.00 20.40 7.35 0.00 6.45 0.00 0.00 0.00 4.94 16.07 29.31 13.00 13.89 13.27 12.46 14.64 3.12 4.01 11 E2_Ac KnownBoundary 0 0.00 6.71 0.00 4.13 4.33 11.58 4.50 0.00 5.38 3.09 0.00 0.00 0.00 0.00 0.00 0.00 4.77 2.57 4.80 0.00 0.00 0.00 0.00 12 E2_Ad KnownBoundary 0 18.15 44.93 3.16 5.06 8.23 0.00 32.42 6.82 5.79 5.61 0.00 0.00 0.00 2.12 10.14 17.09 9.16 28.89 18.64 33.88 5.75 0.00 4.35 13 ER2b ExonRegion 0 15.52 16.10 4.60 6.81 14.27 7.34 20.74 5.19 6.59 5.73 0.00 0.00 0.00 8.26 7.01 23.53 8.80 11.24 15.40 16.67 12.49 2.08 4.65 14 ER2c ExonRegion 0 10.81 31.04 6.13 8.18 11.97 8.69 23.55 5.19 11.12 9.18 0.00 0.00 0.00 6.41 7.79 23.93 9.56 22.85 19.45 29.34 9.86 1.75 3.55 15 ER2d ExonRegion 0 2.35 12.35 3.11 4.83 1.47 2.49 6.40 2.74 7.33 5.46 0.00 0.00 1.64 1.11 1.26 2.90 4.79 17.98 8.81 13.87 6.94 0.00 1.76 16 E2_Da NovelBoundary 0 0.00 0.00 8.22 4.89 0.00 0.00 0.00 0.00 7.90 3.73 0.00 0.00 0.00 0.00 5.19 15.04 13.09 8.08 12.80 10.67 11.49 0.00 3.16 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 18 E2a_E4a KnownJunction 0 3.78 9.67 1.48 1.40 0.00 0.00 0.00 4.39 5.47 8.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 2.56 2.41 0.00 0.00 19 E2a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.64 0.00 0.00 0.00 0.00 0.00 20 E3_Aa NovelBoundary 0 14.74 33.02 12.89 4.00 3.23 0.00 10.64 2.14 20.46 17.92 0.00 0.00 0.00 9.77 8.90 8.20 3.83 12.93 0.00 23.71 11.80 6.00 0.00 21 ER3a ExonRegion 0 2.37 6.27 6.13 6.42 3.75 1.54 8.90 8.61 8.72 6.70 0.00 0.00 3.25 3.91 2.87 4.16 4.62 7.99 1.79 20.34 3.09 1.75 1.65 22 E3_Da NovelBoundary 0 0.00 3.35 14.78 11.85 11.54 0.00 11.17 15.28 27.57 9.03 0.00 6.30 6.01 9.42 14.71 22.99 0.00 15.09 30.78 29.72 0.00 0.00 8.54 23 E4_Aa NovelBoundary 0 0.00 3.29 7.33 14.42 4.33 5.68 4.50 12.65 10.62 2.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.92 0.00 9.78 0.00 0.00 0.00 24 ER4a ExonRegion 0 5.98 13.11 11.89 15.61 17.86 2.85 13.43 11.88 16.26 17.40 0.00 0.00 2.75 4.69 5.48 18.47 2.46 18.30 12.26 31.27 9.58 3.24 3.17 25 E4_Da NovelBoundary 0 17.48 8.62 8.28 12.49 12.99 0.00 6.32 7.52 1.19 1.02 0.00 0.00 0.00 0.00 5.93 0.00 0.00 14.14 0.00 14.57 0.00 0.00 0.00 26 E4a_E5a KnownJunction 0 7.26 19.27 13.42 22.77 24.19 14.48 27.51 18.81 17.68 25.87 0.00 0.00 0.00 2.12 16.69 24.52 0.00 11.94 11.29 34.32 8.09 5.39 4.10 27 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 I4 Intron 0 5.12 18.02 6.47 8.51 3.23 0.00 5.44 1.87 3.85 2.07 0.00 0.64 0.38 0.62 2.02 1.44 0.53 1.85 2.31 4.80 1.42 0.34 0.71 29 I4_SR1 SilentIntronRegion 0 5.20 19.39 7.06 9.16 3.32 0.00 5.40 2.04 3.89 2.25 0.00 0.69 0.41 0.50 1.85 1.18 0.58 2.02 2.28 5.08 1.46 0.37 0.54 30 E5_Ab NovelBoundary 0 0.00 13.81 9.73 21.11 20.88 0.00 10.78 14.75 14.81 13.27 0.00 0.00 0.00 2.35 0.00 13.24 0.00 3.32 11.01 17.39 2.47 2.45 0.00 31 ER5a ExonRegion 0 2.12 14.74 12.41 21.12 18.73 9.17 21.85 15.12 17.91 25.38 0.00 0.00 4.69 3.25 8.70 24.89 0.00 13.17 19.11 32.98 7.44 4.43 2.94 32 ER5b ExonRegion 0 18.37 38.21 31.38 33.53 37.85 5.05 29.39 20.72 23.94 30.01 0.00 6.34 6.78 4.97 5.21 17.50 8.33 13.97 18.77 39.30 5.05 4.98 7.10 33 E5_Da KnownBoundary 0 42.82 73.01 74.27 74.75 77.08 13.74 68.23 72.33 69.62 67.48 2.47 0.00 0.00 10.01 33.01 34.35 8.98 37.23 45.37 81.56 3.03 23.57 19.63 34 ER5c ExonRegion 0 17.58 44.79 37.98 45.16 38.58 4.32 33.48 23.72 31.09 35.46 0.00 7.88 5.91 8.04 6.42 18.51 4.09 22.84 13.27 48.20 3.08 3.18 7.34 35 E5_Db KnownBoundary 0 29.71 67.16 35.10 41.82 19.78 0.00 65.89 15.53 26.01 43.01 0.00 6.30 0.00 6.95 9.15 23.33 3.65 29.76 4.05 50.88 3.15 0.00 0.00 36 E5b_E5c KnownJunction 0 24.60 15.00 21.82 36.19 42.53 0.00 14.26 25.71 12.99 28.85 0.00 7.35 0.00 4.71 4.33 4.02 4.21 13.93 8.75 37.65 2.72 8.27 0.00 37 ER5d ExonRegion 0 18.25 43.93 23.96 31.96 64.72 0.00 36.81 21.70 24.11 29.00 0.00 8.46 7.34 7.43 3.72 21.85 2.87 20.26 13.83 50.14 2.54 3.65 1.66 38 E5_Ac KnownBoundary 0 35.78 31.51 24.78 44.85 89.05 0.00 36.92 25.92 18.87 36.42 2.26 7.35 0.00 9.48 4.45 15.89 8.79 20.19 21.46 49.92 3.15 8.57 7.60 39 ER5e ExonRegion 0 22.67 45.35 28.34 36.06 38.65 4.67 35.85 26.77 29.53 35.58 0.00 3.77 3.07 7.35 5.31 22.68 9.16 23.51 14.46 42.92 6.29 3.52 7.46 40 E5_Dc KnownBoundary 0 40.67 31.18 23.21 51.41 69.19 7.67 72.56 22.96 27.46 48.27 0.00 0.00 6.98 2.47 0.00 21.87 12.90 20.69 17.41 23.78 0.00 2.69 3.41 41 ER5f ExonRegion 0 20.10 44.99 39.49 35.43 40.47 2.85 33.41 23.70 27.56 34.90 0.00 2.44 1.89 6.80 8.55 21.19 5.74 32.55 20.94 43.63 9.12 3.75 11.47 42 E5_Dd NovelBoundary 0 2.89 30.39 22.89 18.35 3.65 4.54 19.78 10.84 14.70 16.87 0.00 0.00 6.82 0.00 6.30 3.25 0.00 31.21 9.60 23.39 0.00 5.57 3.59 43 I5_AR2 ActiveIntronRegion 0 3.75 16.57 7.11 7.91 6.63 0.00 4.69 4.56 5.21 6.05 0.00 1.26 0.00 0.95 0.73 3.16 2.34 1.31 4.51 9.04 3.12 0.74 2.08 44 E6_Aa NovelBoundary 0 6.89 18.09 22.59 19.84 4.33 0.00 6.36 4.81 8.88 9.67 0.00 0.00 0.00 2.47 8.90 0.00 8.23 4.31 8.47 35.92 2.29 0.00 4.35 45 ER6a ExonRegion 0 4.38 10.92 3.09 4.63 2.22 0.00 4.39 1.60 8.38 4.96 0.00 0.00 0.00 1.94 3.36 0.00 1.37 2.29 0.00 13.65 2.74 0.00 0.61