Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF439 Gene 0 106.13 61.08 42.08 17.43 83.50 17.46 58.80 67.91 54.20 66.03 0.52 3.97 8.50 18.89 7.80 43.68 41.48 52.62 32.40 46.40 4.02 23.40 17.27 2 455282 Transcript 0 2.54 1.51 1.10 1.21 1.62 1.38 1.39 0.77 3.89 6.52 0.00 0.00 0.70 0.20 0.00 4.46 2.97 5.79 1.50 5.50 0.65 1.56 2.20 3 442091 Transcript 0 1.72 3.31 1.86 0.41 1.90 1.12 3.63 3.40 3.95 3.30 0.00 0.36 0.39 3.91 0.42 5.13 9.99 12.92 3.25 5.84 0.90 1.06 2.08 4 304030 Transcript 0 48.59 19.89 15.34 3.78 30.09 3.90 16.62 21.31 17.55 16.88 0.41 0.76 1.73 5.18 1.70 15.26 17.43 27.22 19.03 17.15 1.68 6.66 9.87 5 ER1a ExonRegion 0 5.08 3.01 2.19 0.76 3.24 2.75 2.79 1.55 6.57 10.20 0.00 0.00 1.41 0.40 0.00 8.92 5.94 11.58 3.00 8.12 1.31 3.13 4.40 6 E1_Da NovelBoundary 0 0.00 2.96 7.92 1.43 0.00 0.00 0.00 2.30 7.61 10.34 0.00 0.00 0.00 4.89 4.45 3.93 23.56 14.96 4.42 26.40 2.66 0.00 3.59 7 E1a_E4a KnownJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 1.22 2.85 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 0.00 8 ER2a ExonRegion 0 3.44 6.61 3.71 0.83 3.81 2.24 7.26 6.80 6.77 6.60 0.00 0.72 0.78 7.82 0.83 10.27 15.97 23.84 6.50 11.69 1.79 2.12 4.17 9 E2_Da NovelBoundary 0 40.23 3.16 24.87 15.45 7.56 9.82 31.05 15.48 28.44 26.81 6.63 0.00 0.00 22.19 0.00 39.14 20.48 80.83 17.13 41.93 5.50 8.33 23.56 10 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 1.99 0.00 0.00 0.00 0.00 0.00 11 I2 Intron 0 16.85 21.11 7.13 3.46 18.49 2.05 16.61 17.00 17.62 20.97 0.06 1.04 4.65 7.96 3.50 30.94 24.24 38.37 11.94 23.14 2.53 5.16 13.28 12 I2_AR2 ActiveIntronRegion 0 18.10 27.08 11.73 5.58 19.18 2.96 23.06 25.69 29.33 32.16 0.00 1.15 7.03 10.79 4.76 40.99 37.07 62.97 15.84 35.34 4.21 6.62 17.99 13 I2_SR2 SilentIntronRegion 0 20.99 20.35 4.45 2.18 25.16 1.32 14.85 14.15 11.07 16.40 0.17 1.43 3.56 7.29 2.89 30.92 17.04 24.14 11.25 17.16 1.33 5.67 11.96 14 E3_Aa NovelBoundary 0 38.30 16.12 14.58 1.80 35.74 0.00 14.97 21.36 25.52 20.55 0.00 0.00 0.00 4.89 5.19 27.00 8.60 39.80 27.11 15.15 3.15 15.00 16.56 15 ER3a ExonRegion 0 84.48 37.53 28.10 6.65 53.65 5.77 28.39 41.48 31.26 33.37 0.82 1.52 3.46 9.64 3.41 28.87 34.85 54.43 35.93 34.31 3.35 13.08 18.77 16 E3_Ab KnownBoundary 0 67.20 58.94 26.55 8.46 64.35 0.00 28.22 27.81 34.00 35.67 0.00 0.00 0.00 10.24 4.45 26.40 48.99 65.95 60.80 40.65 8.90 22.41 14.68 17 ER3b ExonRegion 0 38.58 41.05 31.80 6.68 44.52 8.86 26.97 57.44 46.82 51.65 0.62 1.64 1.81 16.88 2.17 39.39 35.80 61.73 29.78 37.08 5.99 9.95 21.36 18 E3_Da NovelBoundary 0 7.56 11.51 4.49 0.00 41.68 0.00 9.89 17.83 13.66 8.57 0.00 0.00 0.00 2.30 0.00 8.72 0.00 4.85 3.67 3.26 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 67.49 61.63 30.78 1.53 141.77 21.12 114.87 54.22 41.93 42.28 2.05 0.00 0.00 19.25 4.45 26.66 30.76 44.19 39.06 41.99 3.09 6.25 18.95 20 E4_Aa NovelBoundary 0 25.93 29.99 14.31 0.00 39.05 5.51 18.50 4.97 15.86 19.37 0.00 0.00 5.84 0.00 0.00 0.00 3.83 2.49 3.58 5.88 0.00 2.33 3.24 21 ER4a ExonRegion 0 101.35 55.94 25.25 9.21 129.44 50.69 108.50 55.11 53.19 57.98 0.25 2.98 2.46 20.37 6.23 50.23 34.52 50.71 52.90 45.55 3.79 14.96 27.49 22 E4a_E5a KnownJunction 0 106.32 64.86 42.37 17.81 94.74 29.24 111.73 79.40 67.19 75.97 0.00 0.00 0.00 31.14 4.45 47.59 26.18 49.33 50.92 43.98 5.56 17.02 24.16 23 ER5a ExonRegion 0 105.17 59.28 49.39 15.92 58.46 5.69 45.44 81.59 62.14 80.84 1.26 5.27 6.81 27.12 6.80 55.86 51.78 67.31 54.03 50.94 2.09 23.57 27.85 24 E5_Da KnownBoundary 0 116.98 71.50 45.12 19.71 56.37 7.89 54.32 60.67 61.98 75.70 0.00 6.30 19.80 29.31 8.90 44.35 51.33 53.89 31.62 52.54 2.97 17.64 20.06 25 ER5b ExonRegion 0 135.12 77.42 52.67 23.33 107.21 22.53 75.44 84.55 66.95 82.34 0.54 5.11 11.46 22.44 10.38 51.85 48.41 57.98 35.69 55.88 4.65 30.22 18.48 26 ER5c ExonRegion 0 12.70 2.26 2.59 0.91 6.54 2.04 4.85 1.15 3.84 0.38 0.00 0.00 0.00 0.72 0.00 1.65 0.00 0.00 2.12 0.00 0.00 0.23 0.98 27 IG13_SR1 SilentIntergenicRegion 0 10.96 12.25 5.26 0.87 11.74 1.61 8.40 9.35 8.30 6.48 0.00 0.00 1.52 0.79 0.60 2.75 1.05 3.23 4.86 4.27 0.23 1.10 1.09