Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FDX1L Gene 0 18.13 12.67 51.63 28.76 8.61 20.70 11.66 21.64 20.25 22.06 27.37 6.70 8.87 39.31 58.30 30.82 28.41 26.93 29.69 22.36 32.64 21.99 27.86 2 494368 Transcript 0 0.00 0.00 1.18 0.00 0.00 2.73 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.86 0.00 2.59 0.00 0.00 3 393708 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 343376 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 453681 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 452032 Transcript 0 2.70 1.89 6.22 2.23 1.33 2.16 1.93 2.43 2.12 2.26 1.19 0.63 1.24 2.23 2.32 1.26 1.53 1.75 2.31 2.23 1.21 1.21 1.85 7 486454 Transcript 0 0.00 0.00 2.18 1.09 0.00 0.00 0.00 0.00 0.00 0.77 1.51 2.76 0.00 1.00 1.95 0.00 0.78 1.85 2.26 1.32 0.00 0.00 0.00 8 460631 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 492239 Transcript 0 3.63 0.00 0.00 3.80 0.00 0.00 0.00 1.60 0.00 1.32 13.90 0.00 0.00 2.47 0.00 3.42 0.00 0.00 0.00 0.00 8.15 0.00 0.00 10 493771 Transcript 0 1.34 0.18 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.00 2.38 0.00 0.00 0.00 0.00 0.00 1.71 11 ER1a ExonRegion 0 0.00 1.36 0.82 0.00 1.78 0.61 0.00 0.00 0.00 0.38 0.00 0.00 0.00 0.00 0.97 0.99 1.10 0.00 0.00 0.00 0.73 0.00 0.00 12 ER1b ExonRegion 0 1.41 5.42 4.49 0.45 5.35 7.95 4.41 1.15 0.00 1.15 0.64 0.00 0.00 0.00 8.70 4.95 6.60 0.00 1.06 1.42 5.14 0.00 3.92 13 ER1c ExonRegion 0 6.35 6.10 6.13 1.36 5.35 20.17 11.92 1.73 0.00 1.15 1.93 0.00 0.00 4.87 14.51 5.94 9.90 0.00 3.19 4.26 8.81 0.00 8.81 14 ER1d ExonRegion 0 9.17 6.10 6.13 1.36 8.03 24.45 11.92 1.73 0.00 1.15 5.15 0.00 0.00 9.20 18.37 5.94 9.90 0.62 6.37 7.80 8.81 0.00 8.81 15 ER1e ExonRegion 0 20.95 6.10 6.62 1.91 8.03 34.29 19.86 3.63 0.99 1.15 11.21 0.00 0.00 29.40 40.62 13.97 9.90 5.54 15.29 10.21 9.92 4.38 19.09 16 E1_Da KnownBoundary 0 106.69 13.68 17.56 12.55 21.48 96.99 81.35 9.73 5.01 6.96 18.95 17.26 5.68 81.70 66.88 56.91 37.21 31.75 21.55 30.81 28.85 20.82 50.71 17 E1a_E1h KnownJunction 0 0.00 0.00 1.18 0.00 0.00 2.73 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.86 0.00 2.59 0.00 0.00 18 ER1f ExonRegion 0 45.34 6.57 10.09 3.88 12.66 61.71 44.20 6.78 2.76 1.19 14.27 0.00 0.00 72.46 67.06 35.55 22.73 11.44 19.11 16.94 22.29 13.30 33.66 19 ER1g ExonRegion 0 23.73 11.51 17.23 8.88 10.32 22.80 14.74 5.67 5.09 10.01 16.79 3.96 1.67 30.31 24.71 41.41 25.18 17.37 20.46 8.76 17.76 11.02 21.60 20 E1_Db KnownBoundary 0 0.00 6.51 4.35 6.69 4.33 5.74 6.76 4.11 0.00 7.15 2.58 0.00 0.00 11.89 4.45 28.71 4.11 4.15 0.00 6.39 3.15 3.12 4.35 21 E1b_E1h KnownJunction 0 48.82 56.50 16.44 17.91 12.22 38.50 16.52 21.81 8.77 10.42 43.33 5.40 0.00 22.37 21.51 51.27 51.52 17.66 33.51 22.43 32.80 14.39 0.00 22 ER1h ExonRegion 0 3.23 1.86 3.65 6.74 1.46 2.45 1.83 1.70 1.13 4.89 1.29 0.00 0.00 10.14 10.54 14.70 7.24 3.40 7.49 5.67 5.68 1.32 6.08 23 E1_Ag KnownBoundary 0 3.48 0.00 4.64 4.83 0.00 4.88 0.00 0.00 3.07 2.44 0.00 0.00 0.00 6.77 14.09 6.75 4.30 1.82 16.75 5.75 5.87 2.39 12.46 24 ER1i ExonRegion 0 2.70 2.71 0.44 0.61 0.22 4.33 5.33 0.19 1.78 5.58 0.97 3.13 3.52 12.99 26.27 14.94 4.95 4.62 13.80 3.78 6.86 2.37 20.88 25 E1_Ah KnownBoundary 0 6.67 2.89 0.00 1.66 0.00 2.73 14.53 1.81 3.12 9.19 0.00 6.00 6.33 10.12 21.01 19.05 4.77 6.59 17.60 2.62 9.14 0.00 22.62 26 ER1j ExonRegion 0 18.93 15.82 25.76 10.42 3.47 41.50 9.46 14.40 19.94 18.90 43.63 2.24 6.34 65.02 95.10 53.00 62.53 24.09 32.09 24.78 70.72 27.01 31.05 27 E1_Dc KnownBoundary 0 0.00 5.79 5.00 3.06 0.00 2.73 0.00 4.23 3.47 4.30 2.05 0.00 0.00 0.00 0.00 7.18 13.84 3.40 0.00 0.00 3.15 2.51 4.35 28 E1c_E1i KnownJunction 0 3.63 0.00 0.00 3.80 0.00 0.00 0.00 1.60 0.00 1.32 13.90 0.00 0.00 2.47 0.00 3.42 0.00 0.00 0.00 0.00 8.15 0.00 0.00 29 E1c_E1j KnownJunction 0 25.71 13.02 65.52 34.76 8.23 55.08 6.67 20.62 43.26 34.57 47.12 0.00 18.99 135.15 146.49 89.63 64.33 47.34 40.66 47.55 71.41 47.03 40.12 30 ER1k ExonRegion 0 16.79 2.11 7.26 5.43 6.00 6.73 5.72 2.16 2.77 3.68 4.29 1.11 0.00 6.17 7.69 10.60 6.95 4.41 15.88 3.53 3.09 2.18 4.93 31 E1_Ai KnownBoundary 0 6.96 6.31 6.36 1.90 12.65 10.73 1.68 0.00 1.74 4.46 2.63 0.00 0.00 12.54 13.35 0.00 0.00 6.18 24.75 12.34 14.58 0.00 4.35 32 ER1l ExonRegion 0 9.75 2.47 11.57 5.65 5.22 18.04 1.69 7.62 2.55 5.57 11.34 0.64 0.23 12.99 18.12 13.35 4.98 9.91 15.72 7.53 7.80 5.74 15.02 33 E1_Aj KnownBoundary 0 13.71 6.71 15.02 7.46 0.00 21.69 2.12 13.31 4.72 3.04 15.16 0.00 0.00 22.13 33.50 20.17 8.04 13.27 20.05 6.01 5.93 11.33 26.97 34 ER1m ExonRegion 0 15.97 11.09 79.73 48.92 7.52 44.34 14.75 36.02 39.09 45.96 70.40 9.93 16.77 96.44 132.09 94.88 69.10 64.57 63.11 50.54 77.01 50.99 83.14 35 E1_Dd KnownBoundary 0 0.00 0.00 5.17 2.06 0.00 0.00 0.00 0.00 0.00 1.67 4.84 5.70 0.00 2.30 0.00 0.00 8.60 3.94 4.52 3.07 0.00 0.00 0.00 36 E1d_E2a KnownJunction 1 33.71 24.40 109.69 73.35 35.65 71.49 16.87 47.32 52.72 61.19 65.49 12.60 0.00 115.90 159.10 126.29 47.78 81.08 52.71 66.54 84.82 28.96 106.19 37 ER1n ExonRegion 0 0.00 0.00 2.18 1.09 0.00 0.00 0.00 0.00 0.00 0.77 1.51 2.76 0.00 1.00 1.95 0.00 0.78 1.85 2.26 1.32 0.00 0.00 0.00 38 E1_De NovelBoundary 0 2.96 0.00 0.00 3.33 0.00 0.00 1.85 3.66 0.00 2.55 1.95 0.00 0.00 2.41 0.00 17.35 15.24 0.00 23.72 0.00 0.00 7.10 10.76 39 ER2a ExonRegion 0 26.27 15.91 132.34 84.77 19.35 61.96 35.42 60.96 56.93 61.69 91.26 18.01 14.82 134.66 210.60 128.17 72.68 75.23 74.51 44.53 128.76 53.13 96.49 40 E2_Ab KnownBoundary 0 41.19 25.26 194.64 131.95 20.12 79.39 48.09 89.58 81.05 81.36 113.29 16.51 39.28 150.33 281.72 144.24 116.78 101.52 71.81 74.21 143.69 84.07 112.76 41 ER2b ExonRegion 0 48.68 25.48 168.53 97.19 7.94 57.31 29.00 85.56 70.86 73.33 106.19 19.89 41.62 150.84 264.01 117.40 126.36 85.92 74.56 92.09 131.81 84.06 86.81 42 E2a_E3a KnownJunction 0 71.27 33.74 156.94 87.14 0.00 29.47 14.62 93.85 68.05 71.45 107.82 24.76 48.21 135.56 248.10 117.41 115.10 78.93 64.66 107.32 116.70 84.50 86.81 43 E2a_E3b KnownJunction 0 6.96 3.16 30.22 13.98 0.00 5.05 3.44 10.15 7.96 5.69 4.79 0.00 6.82 9.54 33.75 4.27 9.16 9.74 4.80 5.56 9.27 5.63 3.41 44 ER3a ExonRegion 0 37.93 32.11 136.40 74.56 6.48 22.25 12.23 75.87 61.59 64.17 95.53 27.34 29.25 118.82 282.11 84.00 79.31 77.02 69.24 80.35 109.49 87.45 86.55 45 E3_Ab KnownBoundary 0 43.86 29.93 142.31 92.00 20.20 33.39 15.90 76.93 71.21 60.49 90.60 24.76 20.29 110.01 240.81 79.04 46.47 92.81 95.34 78.36 125.04 84.99 111.14 46 ER3b ExonRegion 0 40.65 46.52 185.55 130.58 21.94 81.26 34.13 79.62 77.07 78.84 129.16 21.87 19.49 150.06 220.10 93.96 104.46 104.28 96.29 66.09 163.65 74.03 120.16 47 E3_Da KnownBoundary 0 70.09 70.58 157.62 111.87 29.20 105.79 38.24 64.40 52.14 65.36 115.71 18.91 39.77 140.62 257.87 116.64 97.62 86.93 67.01 48.32 148.51 34.96 126.25 48 E3_Db KnownBoundary 0 10.37 20.06 66.64 39.69 8.49 14.25 2.25 31.87 26.45 30.84 53.96 0.00 34.09 63.34 105.82 54.52 47.03 23.71 32.38 53.69 67.34 30.37 44.56 49 ER3c ExonRegion 0 56.49 53.81 182.20 122.45 21.20 69.68 23.83 79.51 68.03 92.72 140.80 22.98 42.93 151.79 290.57 126.66 123.66 106.60 72.28 83.63 163.07 52.09 122.44 50 E3_Dc KnownBoundary 0 32.30 21.44 97.78 59.43 7.56 33.79 9.98 40.87 34.32 47.63 67.44 19.81 21.59 106.48 197.79 32.30 71.25 63.67 47.72 53.63 84.76 41.39 71.53 51 ER3d ExonRegion 0 34.69 34.84 161.64 93.86 14.19 37.63 13.01 69.51 60.09 77.39 106.98 19.58 45.07 122.73 217.85 85.80 105.63 89.58 57.20 78.63 121.01 50.00 98.95 52 ER3e ExonRegion 0 43.52 19.20 174.00 112.11 20.92 43.42 13.00 62.88 60.62 81.34 100.05 26.32 51.59 159.55 294.83 152.11 87.47 104.88 110.02 77.49 111.90 98.26 102.72 53 E3_Dd KnownBoundary 0 77.27 27.30 187.13 138.38 47.11 64.68 16.52 53.77 63.37 77.28 115.98 44.11 32.95 212.61 464.92 175.42 116.32 90.00 208.57 74.53 109.41 147.94 128.47 54 E3d_E3c KnownJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 0.00 0.00 0.00 3.41 55 ER3f ExonRegion 0 36.54 19.38 153.64 112.10 19.08 44.98 11.20 62.78 56.51 68.17 108.78 28.08 27.59 135.95 217.76 97.03 115.63 90.95 121.51 64.77 138.74 124.95 85.55 56 E3_De KnownBoundary 1 49.05 30.52 120.16 59.20 7.72 26.75 13.78 60.21 47.02 60.76 103.92 18.46 8.28 57.98 135.98 47.59 145.11 49.00 59.58 53.05 116.02 87.69 56.77 57 ER3g ExonRegion 0 57.16 38.93 122.05 52.54 29.72 41.30 29.96 41.78 44.72 46.79 56.42 15.18 13.97 76.20 109.07 49.58 68.67 61.44 73.86 49.75 63.68 51.50 52.58 58 E3_Df KnownBoundary 0 43.12 66.30 115.99 51.84 31.83 34.07 26.85 41.85 44.42 43.44 11.00 5.70 13.64 12.01 8.90 28.97 25.53 27.86 37.65 41.74 12.60 10.84 26.46 59 ER3h ExonRegion 0 21.08 29.39 119.34 56.97 18.54 23.01 25.99 51.35 45.27 38.89 13.04 12.21 19.55 39.23 32.08 17.33 19.73 41.02 43.61 41.77 10.66 22.02 14.73 60 E3_Dg KnownBoundary 0 27.86 17.69 150.08 79.01 25.30 18.11 32.42 70.89 56.08 46.52 17.27 12.30 0.00 71.46 40.55 14.01 16.55 48.50 57.32 54.01 11.86 25.17 44.22 61 ER3i ExonRegion 0 18.92 13.22 42.76 15.63 9.30 15.15 13.48 17.00 14.84 15.81 8.35 4.41 8.65 13.12 16.23 8.82 10.74 12.27 15.21 15.62 8.44 8.50 12.96 62 E3_Ac KnownBoundary 0 13.48 8.75 19.16 8.99 3.65 4.88 10.16 8.34 5.90 7.44 0.00 0.00 0.00 17.36 4.45 0.00 4.77 4.39 0.00 11.89 0.00 3.00 3.67 63 ER3j ExonRegion 0 8.95 3.94 0.41 0.72 1.17 9.74 2.92 0.00 1.09 0.01 0.00 0.00 0.00 0.89 0.00 0.00 0.76 0.01 0.00 0.91 0.00 0.28 0.96 64 E3h_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 ER4a ExonRegion 0 0.59 2.01 0.00 0.12 0.00 0.02 0.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 66 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67 ER5a ExonRegion 0 5.16 1.00 0.16 0.00 0.00 1.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 E5_Da KnownBoundary 0 24.37 6.18 35.45 21.71 0.00 11.41 0.00 24.07 9.29 13.05 11.74 0.00 0.00 9.36 4.94 4.19 7.85 2.40 8.28 11.76 2.97 3.12 3.84 69 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER5b ExonRegion 0 2.69 0.37 0.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 E5_Ab NovelBoundary 0 26.97 15.26 91.13 30.00 7.81 2.84 4.46 26.16 20.40 18.91 8.05 0.00 0.00 15.36 4.45 17.00 4.77 30.10 9.22 21.86 6.30 6.25 8.45 72 E5_Db NovelBoundary 0 10.89 12.43 64.04 13.29 12.22 19.31 10.82 26.66 15.60 27.16 12.95 0.00 0.00 12.01 0.00 4.19 4.77 22.59 23.06 16.11 11.43 3.06 0.00 73 ER5c ExonRegion 0 1.56 0.00 1.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 ER5d ExonRegion 0 0.00 0.00 0.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.00 0.00 0.00 0.00 75 E5c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 76 ER6a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 0.00 0.00 0.00 0.00 77 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 78 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00