Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM129C Gene 0 212.20 1.40 0.92 5.46 53.45 3.63 8.82 12.76 5.81 1.43 32.58 17.26 16.58 28.36 49.69 70.20 34.30 3.10 1.07 2.36 1.96 0.42 0.84 2 300971 Transcript 0 6.37 5.38 2.07 1.52 6.56 3.46 5.25 2.92 2.43 1.92 2.91 14.05 17.14 9.55 20.24 6.74 3.74 2.24 3.61 10.45 2.91 2.36 1.66 3 449408 Transcript 0 20.72 0.00 0.00 0.66 14.39 0.00 2.67 1.73 1.19 1.10 1.25 2.30 2.49 2.52 2.83 15.46 6.62 0.62 1.03 0.69 0.00 0.00 0.00 4 435646 Transcript 0 18.60 0.00 0.00 0.97 10.06 0.00 0.84 1.27 0.00 0.00 1.21 0.00 3.73 2.27 5.07 3.55 2.06 0.00 0.00 0.00 0.00 0.00 0.00 5 332386 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 352727 Transcript 0 34.90 0.00 0.00 0.00 3.14 2.21 0.00 0.00 0.00 0.00 4.21 0.00 0.00 0.00 9.64 3.93 8.79 0.00 0.00 0.00 0.00 0.00 0.00 7 335393 Transcript 0 309.15 1.08 0.44 5.12 43.18 1.24 5.83 8.62 4.34 0.58 10.72 22.12 18.23 9.85 31.08 36.05 16.33 1.69 0.31 0.52 0.53 0.20 0.43 8 ER1a ExonRegion 0 0.01 0.65 1.16 0.65 0.86 0.00 0.00 0.00 0.00 1.10 0.63 0.08 2.48 0.43 0.00 0.00 1.06 2.36 1.02 2.05 1.41 0.00 0.00 9 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 E2_Aa NovelBoundary 0 28.38 0.00 0.00 0.00 8.23 2.73 1.72 0.00 1.45 4.51 12.37 0.00 0.00 18.72 22.87 24.61 27.96 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2a ExonRegion 0 102.83 0.00 1.48 3.14 29.45 0.74 5.32 9.64 1.51 0.00 14.35 7.06 7.02 6.23 21.86 73.72 21.13 4.39 2.56 1.71 1.93 0.00 0.00 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.40 4.33 0.00 0.00 2.55 0.00 0.00 7.37 0.00 13.15 2.12 0.00 3.50 12.25 6.47 0.00 0.00 5.13 0.00 0.00 13 E2a_E4a NovelJunction 0 10.30 0.00 1.66 0.00 0.00 0.00 0.00 6.65 0.00 4.75 0.00 0.00 0.00 0.00 10.14 0.00 21.51 2.53 0.00 2.75 0.00 0.00 0.00 14 ER3a ExonRegion 1 11.88 0.00 1.98 2.13 1.29 1.51 0.00 7.28 1.65 0.00 39.56 0.00 2.42 10.69 25.04 15.20 45.52 4.71 2.11 1.41 1.60 0.00 0.00 15 E3_Da KnownBoundary 1 22.37 0.00 3.37 5.63 0.00 0.00 0.00 12.77 5.67 0.00 74.76 0.00 0.00 19.60 60.57 49.82 68.44 2.49 3.86 2.62 0.00 0.00 0.00 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER3b ExonRegion 0 13.40 0.00 0.92 7.05 0.85 0.00 0.00 11.95 1.56 1.13 36.28 9.29 9.45 28.81 75.85 121.25 33.20 1.26 0.46 1.88 4.54 0.00 1.15 18 E3b_E4a KnownJunction 1 17.11 0.00 0.00 8.79 4.33 0.00 0.00 13.72 3.07 1.05 29.06 6.15 13.31 14.89 71.57 214.82 24.59 0.00 0.00 0.00 11.24 0.00 4.35 19 ER4a ExonRegion 0 23.52 0.00 0.00 4.03 7.84 1.78 5.18 6.93 4.83 0.76 28.32 5.46 3.98 27.43 49.44 78.15 46.42 2.86 0.81 1.71 4.77 0.00 0.56 20 E4_Da NovelBoundary 0 55.64 0.00 0.00 0.00 7.05 0.00 7.95 4.15 0.00 0.00 4.79 0.00 6.49 14.13 27.32 26.06 12.44 6.55 0.00 0.00 0.00 0.00 0.00 21 E4a_E5a KnownJunction 0 6.67 0.00 0.00 3.43 4.07 0.00 3.62 2.30 1.45 0.00 22.69 6.15 0.00 31.43 45.99 45.71 35.62 4.56 4.05 0.00 5.56 0.00 0.00 22 I4 Intron 0 149.38 0.00 0.00 2.08 58.79 3.97 9.95 6.16 0.84 0.19 6.38 5.36 4.93 11.99 13.48 36.54 10.52 0.52 0.00 1.45 0.25 0.00 1.67 23 I4_SR1 SilentIntronRegion 0 134.52 0.00 0.00 1.80 58.54 3.52 10.76 6.09 1.09 0.25 6.86 6.96 6.40 13.79 15.64 37.74 11.21 0.68 0.00 1.57 0.33 0.00 0.87 24 I4_AR1 ActiveIntronRegion 0 203.04 0.00 0.00 3.08 60.80 5.56 7.35 6.50 0.00 0.00 4.88 0.00 0.00 6.03 6.38 33.02 8.33 0.00 0.00 1.07 0.00 0.00 4.45 25 E5_Aa NovelBoundary 0 119.72 0.00 0.00 1.60 36.25 8.52 8.17 2.38 0.00 0.00 12.06 12.30 19.80 7.53 11.74 15.12 8.79 0.00 0.00 0.00 0.00 0.00 0.00 26 ER5a ExonRegion 1 102.02 0.00 0.81 5.32 40.69 3.75 5.28 8.36 3.16 1.66 44.68 5.53 11.30 29.66 46.98 76.37 51.52 1.04 0.53 0.98 1.74 0.00 1.30 27 E5a_E6a KnownJunction 0 45.42 0.00 0.00 5.73 57.05 0.00 4.28 19.96 3.21 3.30 30.06 11.85 19.32 13.66 34.12 123.39 44.41 0.00 0.00 0.00 0.00 0.00 0.00 28 I5 Intron 0 46.55 0.25 0.34 1.38 21.42 0.45 2.36 0.95 0.68 0.11 2.03 5.71 3.25 1.85 4.15 10.43 3.66 0.28 0.39 0.39 0.00 0.13 0.18 29 I5_SR1 SilentIntronRegion 0 56.90 0.32 0.43 1.76 26.57 0.29 2.92 1.22 0.87 0.13 2.60 7.31 3.85 2.28 4.98 12.89 4.42 0.36 0.50 0.50 0.00 0.16 0.23 30 ER6a ExonRegion 0 51.73 2.47 1.33 3.92 35.09 4.43 8.64 9.65 3.16 2.34 46.02 8.92 20.97 34.09 42.52 94.70 46.68 5.24 0.00 3.22 0.00 0.00 0.09 31 E6a_E7a KnownJunction 0 162.25 0.00 3.19 1.93 20.12 19.93 8.44 13.64 6.42 1.32 30.69 12.45 13.64 19.60 5.19 61.52 33.94 0.00 0.00 0.00 0.00 0.00 0.00 32 ER7a ExonRegion 0 168.72 0.33 1.49 4.61 23.07 4.98 8.61 10.74 7.94 1.70 32.69 6.08 9.95 35.77 45.37 57.57 38.93 2.47 0.00 3.47 0.38 0.00 1.16 33 E7a_E8a KnownJunction 0 94.98 3.29 1.48 3.46 11.97 13.00 11.92 9.53 10.53 0.00 42.85 0.00 6.98 29.14 34.24 59.47 36.65 2.45 0.00 5.94 3.15 0.00 0.00 34 ER8a ExonRegion 0 75.05 0.62 0.67 1.66 20.23 2.55 6.05 5.94 7.18 0.26 33.61 6.64 4.69 32.33 28.18 49.54 30.46 2.80 0.00 2.37 1.72 0.00 1.34 35 E8a_E9a KnownJunction 0 145.66 0.00 0.00 3.06 20.54 0.00 3.75 4.89 8.51 2.23 40.43 11.55 13.64 31.96 28.43 53.66 43.57 2.57 0.00 0.00 0.00 0.00 0.00 36 ER9a ExonRegion 0 43.85 0.05 1.14 2.63 15.64 0.99 2.14 3.57 6.63 1.28 38.17 7.62 10.62 37.67 37.75 54.43 25.96 3.05 0.00 1.33 0.69 0.00 0.97 37 E9a_E10a KnownJunction 0 26.82 0.00 0.00 0.00 18.76 2.50 2.25 0.00 2.60 1.67 16.74 0.00 20.45 22.49 32.51 30.59 37.12 0.00 0.00 0.00 0.00 0.00 0.00 38 I9 Intron 0 26.61 0.00 0.16 1.60 10.29 0.64 2.31 2.25 1.61 0.30 4.22 0.00 3.04 6.42 8.88 20.76 8.07 0.40 0.00 0.19 0.38 0.18 0.26 39 I9_SR1 SilentIntronRegion 0 19.55 0.00 0.23 1.13 9.57 0.97 2.32 2.11 1.71 0.44 3.71 0.00 3.58 6.98 8.08 15.14 8.88 0.36 0.00 0.02 0.00 0.28 0.00 40 I9_AR1 ActiveIntronRegion 0 40.68 0.00 0.02 2.53 11.79 0.00 2.32 2.54 1.42 0.02 5.26 0.00 2.00 5.40 10.54 31.95 6.57 0.48 0.00 0.51 1.14 0.00 0.76 41 E10_Aa NovelBoundary 0 57.94 0.00 0.00 3.53 23.01 0.00 0.00 4.56 2.69 0.00 6.90 12.60 6.82 19.31 8.90 47.34 8.70 0.00 0.00 2.49 0.00 0.00 0.00 42 ER10a ExonRegion 0 71.03 0.50 0.98 2.34 27.82 2.09 5.08 7.42 4.61 0.64 28.69 7.57 5.03 33.53 45.77 59.52 27.57 2.87 0.00 0.57 0.59 0.00 0.00 43 E10a_E11a KnownJunction 0 134.39 0.00 0.00 7.16 15.96 0.00 8.57 11.95 6.74 0.00 57.86 6.15 19.97 26.55 22.87 98.52 26.93 1.74 0.00 0.00 0.00 0.00 0.00 44 E11_Aa NovelBoundary 1 23.63 0.00 0.00 1.80 26.91 0.00 2.08 1.81 1.59 0.00 0.00 6.30 19.97 0.00 4.45 4.02 4.39 2.57 0.00 0.00 0.00 0.00 0.00 45 ER11a ExonRegion 0 166.10 0.15 0.00 2.60 38.91 6.55 7.72 23.47 9.86 0.69 52.61 12.04 16.08 47.93 90.32 95.76 42.48 5.32 1.02 0.00 3.10 0.00 0.00 46 E11a_E12a KnownJunction 0 279.46 2.83 0.00 1.63 73.85 10.33 8.92 26.00 9.52 1.50 33.64 13.05 6.66 34.26 110.27 85.70 54.23 8.46 0.00 0.00 3.15 0.00 0.00 47 ER12a ExonRegion 0 199.21 1.56 0.00 5.58 45.26 5.42 8.20 16.78 6.40 1.24 35.93 18.28 25.53 47.70 79.50 84.67 41.75 2.89 0.00 0.58 3.80 0.91 0.00 48 E12a_E13a KnownJunction 0 368.58 0.00 0.00 2.06 41.09 5.56 7.99 15.77 10.68 0.00 27.22 11.40 19.15 60.69 75.65 121.76 47.12 9.58 0.00 3.26 7.85 0.00 0.00 49 E12a_E15a KnownJunction 0 34.90 0.00 0.00 0.00 3.14 2.21 0.00 0.00 0.00 0.00 4.21 0.00 0.00 0.00 9.64 3.93 8.79 0.00 0.00 0.00 0.00 0.00 0.00 50 ER13a ExonRegion 0 265.27 0.00 0.00 5.92 74.13 1.94 15.20 15.60 7.77 0.27 44.46 27.62 11.51 46.09 77.96 97.34 75.34 6.69 0.00 2.38 6.63 0.00 2.77 51 E13_Da NovelBoundary 0 24.89 0.00 0.00 0.00 26.15 0.00 2.21 2.18 5.32 0.00 2.00 6.30 6.82 4.89 14.09 15.81 13.28 0.00 0.00 0.00 3.03 0.00 0.00 52 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 E13a_E15a KnownJunction 0 407.85 0.00 0.00 9.26 56.62 0.00 7.99 12.98 7.55 1.34 47.38 0.00 20.78 47.85 67.12 66.91 40.95 4.56 0.00 0.00 6.05 0.00 0.00 54 E13a_E17a NovelJunction 0 22.08 0.00 0.00 0.00 3.65 0.00 0.00 2.18 0.00 0.00 0.00 5.70 0.00 2.41 4.45 15.30 8.32 0.00 0.00 0.00 0.00 0.00 0.00 55 E14_Aa NovelBoundary 0 54.82 69.99 51.65 61.16 40.58 40.09 143.88 61.90 43.63 40.35 7.63 12.75 6.82 8.95 19.41 36.14 35.53 41.25 26.64 65.58 26.75 18.55 68.97 56 ER14a ExonRegion 1 12.73 10.76 4.15 3.04 13.12 6.93 10.49 5.84 4.87 3.83 5.81 28.09 34.29 19.09 40.49 13.47 7.48 4.48 7.22 20.90 5.83 4.72 3.33 57 ER15a ExonRegion 1 423.89 1.80 0.00 7.02 108.15 11.41 21.80 18.66 6.35 0.58 57.50 9.16 11.06 58.99 62.77 114.80 58.00 1.53 0.57 1.69 2.26 0.00 0.00 58 E15_Da NovelBoundary 0 47.19 0.00 0.00 0.00 21.99 0.00 0.00 2.30 0.00 0.00 4.79 0.00 6.66 0.00 13.35 29.22 8.98 2.53 0.00 0.00 0.00 0.00 0.00 59 E15a_E16a KnownJunction 0 537.95 6.71 0.00 4.73 241.51 22.20 38.42 21.81 1.39 0.00 47.38 12.60 13.64 53.09 56.62 132.19 52.55 0.00 4.80 2.81 0.00 0.00 0.00 60 E15a_E17a KnownJunction 0 37.19 0.00 0.00 1.93 20.12 0.00 1.68 2.55 0.00 0.00 2.42 0.00 7.47 4.53 10.14 7.09 4.11 0.00 0.00 0.00 0.00 0.00 0.00 61 I15 Intron 0 46.51 0.17 0.54 1.12 35.25 0.70 3.09 2.63 1.49 0.15 4.03 7.38 10.83 4.21 6.03 16.93 7.44 0.47 0.27 0.18 0.37 0.00 0.00 62 I15_SR1 SilentIntronRegion 0 46.58 0.17 0.54 1.12 35.31 0.70 3.10 2.63 1.49 0.15 4.03 7.39 10.85 4.21 6.04 16.96 7.44 0.47 0.27 0.18 0.38 0.00 0.00 63 E16_Aa NovelBoundary 0 105.43 0.00 0.00 0.00 54.67 5.00 16.52 0.00 1.33 0.00 0.00 0.00 0.00 9.77 8.90 22.56 7.48 0.00 0.00 0.00 0.00 0.00 0.00 64 ER16a ExonRegion 0 315.86 2.54 1.11 9.22 179.63 14.15 18.46 24.75 10.45 3.88 75.50 22.16 30.82 44.37 84.79 117.15 49.08 2.77 2.31 1.62 1.34 1.14 0.00 65 E16_Da KnownBoundary 0 20.23 0.00 0.00 0.00 4.16 0.00 5.30 1.52 0.00 0.00 0.00 0.00 0.00 9.30 4.45 19.74 8.60 0.00 0.00 0.00 0.00 0.00 0.00 66 E16a_E17a KnownJunction 1 284.72 0.00 0.00 5.63 115.70 13.29 8.88 24.23 12.41 1.21 41.43 17.41 20.13 39.56 58.47 180.98 21.41 0.00 9.51 0.00 0.00 0.00 0.00 67 E16a_E18a KnownJunction 0 19.63 0.00 0.00 0.00 8.23 0.00 2.08 0.00 1.50 0.00 2.11 0.00 6.33 4.47 8.90 12.82 4.68 0.00 0.00 0.00 0.00 0.00 0.00 68 ER16b ExonRegion 0 20.72 0.00 0.00 0.66 14.39 0.00 2.67 1.73 1.19 1.10 1.25 2.30 2.49 2.52 2.83 15.46 6.62 0.62 1.03 0.69 0.00 0.00 0.00 69 E16_Db NovelBoundary 0 43.86 0.00 0.00 0.00 34.30 0.00 5.96 2.26 4.57 2.93 6.74 6.30 0.00 4.65 5.81 16.66 0.00 2.07 0.00 0.00 3.15 0.00 0.00 70 I16 Intron 0 54.18 0.00 0.00 1.07 15.54 1.09 2.36 1.19 0.97 0.11 1.78 5.24 4.46 2.28 3.06 11.18 5.88 0.67 0.21 0.14 0.00 0.00 0.97 71 I16_SR1 SilentIntronRegion 0 59.01 0.00 0.00 0.95 16.09 1.29 2.69 1.41 1.15 0.13 1.96 5.13 4.07 2.51 3.01 11.84 6.19 0.79 0.00 0.17 0.00 0.00 1.15 72 E17_Aa NovelBoundary 0 66.38 0.00 0.00 0.00 72.84 0.00 13.78 0.00 3.01 1.67 4.63 5.85 0.00 2.41 4.45 37.00 4.77 1.82 0.00 0.00 0.00 0.00 0.00 73 ER17a ExonRegion 0 300.30 0.50 1.16 15.99 84.44 3.73 10.33 35.04 11.63 4.42 65.86 23.60 24.49 54.42 102.90 150.11 53.52 1.24 2.03 1.92 2.34 0.98 3.69 74 E17_Da KnownBoundary 0 397.33 3.35 3.02 22.27 127.93 0.00 24.55 49.17 19.94 11.09 63.54 30.01 32.79 63.22 141.17 131.93 63.96 2.32 0.00 0.00 3.15 0.00 6.66 75 ER17b ExonRegion 0 417.46 2.03 0.44 8.92 262.24 8.20 36.82 26.31 11.43 3.17 63.12 31.73 35.12 34.57 61.74 137.57 49.54 1.51 2.60 1.74 1.48 0.90 1.46 76 E17_Db NovelBoundary 1 1675.85 2.96 2.75 20.88 567.40 16.01 60.19 49.86 17.04 7.71 80.34 55.97 93.34 96.30 128.93 360.33 46.00 1.87 0.00 0.00 2.66 0.00 0.00 77 I17_AR5 ActiveIntronRegion 1 268.43 2.59 0.00 0.00 81.84 4.68 10.96 1.64 0.00 0.00 12.27 82.75 57.28 16.53 37.50 18.95 10.52 0.00 0.00 0.00 0.00 0.00 0.00 78 E18_Aa NovelBoundary 1 596.62 8.49 0.00 31.60 197.71 5.62 24.25 24.73 17.79 3.20 46.27 111.94 113.14 18.84 124.24 106.55 49.93 3.94 8.28 3.26 5.99 0.00 0.00 79 ER18a ExonRegion 1 598.67 2.17 0.89 10.24 78.13 2.49 9.58 17.24 7.18 1.16 19.33 44.24 30.12 15.23 53.25 59.28 27.99 3.38 0.62 1.03 1.07 0.40 0.85 80 IG35 Intergenic 0 24.66 0.00 0.00 1.30 6.65 0.26 1.13 1.28 0.65 0.24 2.06 5.57 1.43 0.99 1.27 4.86 1.41 0.39 0.00 0.30 1.10 0.00 0.00 81 IG35_SR1 SilentIntergenicRegion 0 25.92 0.00 0.00 1.37 6.99 0.27 1.19 1.35 0.69 0.16 2.14 5.86 1.50 1.04 1.33 5.00 1.48 0.35 0.00 0.32 1.15 0.00 0.00