Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF333 Gene 0 47.22 107.55 38.66 138.73 73.23 40.98 39.56 65.94 56.54 64.80 31.40 29.38 29.72 36.64 25.38 37.11 26.47 80.34 46.24 72.08 42.77 73.94 45.73 2 392987 Transcript 0 3.62 21.42 20.71 59.22 15.37 0.00 4.34 4.92 16.34 10.22 6.44 1.44 4.51 2.16 3.25 1.77 3.31 88.43 14.19 49.79 11.59 43.20 9.29 3 292530 Transcript 0 31.94 71.71 20.91 86.55 44.67 32.13 30.03 52.49 46.38 54.33 34.90 17.65 22.48 33.87 25.80 33.33 22.66 83.72 41.21 72.14 50.24 57.77 34.56 4 ER1a ExonRegion 0 12.86 31.16 8.54 18.54 13.70 26.68 27.13 4.55 4.93 6.41 8.00 0.00 0.00 11.54 8.95 20.36 13.17 34.99 17.09 26.33 3.63 7.84 18.28 5 E1a_E2a KnownJunction 0 20.52 74.66 13.75 21.11 23.77 92.33 47.52 5.96 15.60 8.09 12.27 0.00 0.00 19.54 28.93 43.75 13.84 64.75 46.50 32.98 5.99 8.39 45.16 6 ER2a ExonRegion 1 7.79 41.41 12.98 18.62 14.11 47.10 20.64 8.88 14.01 13.89 11.73 6.69 0.64 10.56 9.17 28.30 7.05 57.24 20.56 26.02 12.77 8.76 25.16 7 E2a_E3a KnownJunction 0 3.04 11.38 8.93 12.42 7.39 2.67 1.72 8.71 5.18 16.44 13.48 11.70 0.00 2.35 4.45 7.26 0.00 33.74 4.61 24.35 21.25 8.51 3.76 8 E3_Aa NovelBoundary 0 3.63 11.25 15.55 7.82 3.99 0.00 10.02 1.52 8.51 7.44 0.00 6.30 0.00 2.47 4.45 0.00 0.00 17.82 4.61 2.94 0.00 0.00 4.27 9 ER3a ExonRegion 0 3.87 13.22 19.80 57.27 4.34 4.76 5.08 31.03 34.65 47.22 25.22 8.66 3.82 29.93 13.41 13.04 28.56 91.08 30.95 65.01 36.41 31.84 32.71 10 E3a_E4a KnownJunction 0 7.19 9.08 32.02 90.70 3.48 0.00 6.18 17.13 41.72 59.90 23.32 24.31 6.82 34.67 24.11 26.49 30.39 164.53 53.84 67.24 42.26 26.33 80.16 11 E4_Aa NovelBoundary 0 0.00 0.00 4.85 7.49 19.61 2.90 18.28 4.48 1.79 0.00 0.00 11.70 0.00 10.36 0.00 4.36 0.00 8.75 0.00 5.31 0.00 0.00 8.19 12 ER4a ExonRegion 0 11.09 25.36 34.04 90.90 30.52 20.52 21.20 46.78 39.23 54.98 25.51 15.15 9.67 29.06 17.98 46.56 23.14 156.96 32.35 86.33 59.18 37.68 60.02 13 E4a_E5a KnownJunction 1 3.78 54.07 43.26 124.83 90.58 89.89 88.90 50.73 60.07 75.19 36.59 12.45 13.64 38.02 24.35 53.58 13.74 172.45 49.60 98.88 92.91 86.40 32.52 14 ER5a ExonRegion 0 14.23 63.19 28.07 86.72 31.56 41.09 47.82 42.59 47.56 55.49 41.31 16.54 17.46 47.67 16.36 25.85 36.31 120.77 56.49 74.44 90.70 64.04 34.92 15 E5_Da NovelBoundary 0 3.70 12.76 6.62 16.58 7.56 12.27 0.00 6.24 11.05 7.36 4.79 0.00 0.00 6.59 0.00 0.00 4.77 24.25 11.86 20.84 10.63 2.51 29.11 16 E5a_E6a KnownJunction 0 9.71 55.19 11.95 67.79 10.78 32.99 7.20 50.77 32.90 51.66 12.85 6.00 13.31 34.67 4.45 17.43 30.29 68.48 27.39 55.93 56.46 31.84 27.23 17 I5 Intron 0 7.65 14.37 6.94 22.44 11.00 4.92 7.52 9.26 9.20 13.27 5.55 4.21 4.03 8.67 6.23 10.44 6.89 32.62 12.50 22.46 11.70 9.08 10.92 18 I5_AR2 ActiveIntronRegion 0 13.09 8.05 8.22 24.05 5.78 1.01 9.84 5.35 7.53 12.05 4.95 2.14 10.54 5.55 7.83 18.09 6.78 29.37 18.15 21.83 13.81 11.92 13.70 19 I5_AR3 ActiveIntronRegion 0 8.47 8.13 2.04 12.27 0.00 0.00 5.30 6.91 9.68 4.59 3.87 4.33 0.00 6.50 6.29 5.94 13.20 24.02 44.60 19.86 4.04 10.42 18.11 20 I5_SR1 SilentIntronRegion 0 8.63 14.24 9.24 19.90 15.78 7.30 10.39 12.04 8.27 7.64 5.45 8.01 3.99 9.67 9.22 9.80 6.88 22.94 16.29 16.36 11.43 8.50 12.04 21 I5_AR4 ActiveIntronRegion 0 15.27 33.94 10.79 40.55 20.70 7.66 14.32 18.93 18.15 27.13 10.93 4.11 5.56 12.11 8.17 20.28 9.58 54.51 19.15 35.10 15.85 19.17 15.34 22 I5_AR5 ActiveIntronRegion 0 5.57 23.95 9.75 40.87 16.28 2.59 8.32 18.59 11.62 24.59 9.77 1.32 1.58 15.90 6.32 19.24 2.81 81.11 25.55 47.50 17.61 11.51 14.31 23 I5_AR6 ActiveIntronRegion 1 4.23 13.35 8.58 36.71 7.36 0.00 13.65 26.14 8.65 22.58 13.05 0.00 0.00 17.97 2.90 8.92 11.14 38.34 16.32 36.17 14.88 11.59 10.09 24 I5_AR7 ActiveIntronRegion 0 6.65 13.36 11.03 39.13 6.50 0.52 15.13 18.03 9.35 20.48 6.63 0.00 0.00 13.69 2.90 8.92 16.50 31.41 18.66 25.84 14.80 6.25 11.75 25 I5_AR8 ActiveIntronRegion 0 9.80 11.02 13.67 40.60 8.03 6.66 10.10 17.38 10.53 18.77 6.82 0.00 0.00 12.65 8.55 4.69 17.89 35.01 16.93 25.87 18.56 5.59 11.75 26 I5_AR9 ActiveIntronRegion 1 10.58 12.20 17.16 42.13 18.00 11.00 12.52 11.78 14.93 19.08 6.15 0.00 0.00 8.42 23.74 8.65 13.80 59.97 12.74 32.69 28.05 5.87 9.08 27 I5_AR10 ActiveIntronRegion 1 11.64 14.44 17.16 39.39 22.74 11.19 10.19 12.79 19.51 25.00 3.87 0.00 0.00 8.77 29.59 12.19 6.60 84.63 7.33 45.96 22.26 9.17 14.68 28 I5_SR2 SilentIntronRegion 0 4.68 13.36 5.59 21.65 10.66 6.55 5.67 5.48 9.18 11.98 4.87 4.33 3.74 11.43 6.77 8.59 8.61 38.56 8.69 32.68 12.26 7.91 11.96 29 I5_AR11 ActiveIntronRegion 0 6.76 9.51 6.15 26.10 7.75 4.42 5.09 8.25 11.25 15.75 4.72 6.18 5.94 10.90 5.52 8.61 10.27 43.67 13.90 26.82 15.13 9.59 13.06 30 I5_AR12 ActiveIntronRegion 0 6.35 8.61 2.45 19.80 2.68 6.90 4.98 3.46 4.58 7.76 4.09 0.00 0.00 3.15 6.49 11.36 7.38 25.76 11.99 8.51 10.89 4.29 7.77 31 I5_AR13 ActiveIntronRegion 0 6.11 4.07 1.63 16.05 2.68 11.00 5.00 5.19 4.94 5.99 5.80 6.73 0.00 2.35 6.77 14.53 4.40 27.92 14.51 12.29 14.20 3.94 11.75 32 ER6a ExonRegion 0 16.43 41.84 26.70 75.21 13.22 22.26 20.80 38.04 46.16 48.11 26.20 13.17 18.48 33.45 17.58 40.70 32.78 112.46 45.77 65.87 62.76 54.65 37.45 33 E6_Da NovelBoundary 0 3.78 0.00 3.46 10.69 0.00 0.00 5.87 2.09 1.79 4.14 2.47 0.00 0.00 0.00 0.00 0.00 0.00 18.03 0.00 11.63 15.01 12.49 16.39 34 E6a_E7a KnownJunction 0 2.96 25.06 28.44 73.22 18.00 0.00 3.89 4.15 20.95 8.30 7.69 0.00 6.82 2.12 0.00 0.00 0.00 88.38 12.42 49.22 11.49 39.99 4.18 35 E6a_E8a KnownJunction 0 23.56 24.47 21.70 24.37 23.85 32.08 24.07 37.87 35.27 41.21 24.11 6.30 6.82 26.90 33.75 33.58 39.74 59.86 30.40 29.91 54.92 14.02 36.71 36 I6 Intron 0 2.99 4.60 2.58 10.53 2.77 4.15 5.12 1.21 1.91 4.19 2.19 1.30 0.36 2.75 2.01 4.20 3.11 19.22 4.20 11.63 6.23 8.84 8.31 37 I6_AR1 ActiveIntronRegion 0 3.53 2.03 1.63 15.67 2.68 1.83 0.88 1.73 3.71 3.82 2.26 0.00 0.00 1.89 2.90 2.48 6.60 31.41 6.37 18.79 13.22 6.25 11.75 38 I6_SR2 SilentIntronRegion 0 4.13 4.26 3.16 13.15 2.64 3.48 6.60 1.04 2.53 4.11 2.47 0.61 0.66 1.93 2.12 4.54 3.30 24.55 3.96 13.67 4.95 10.13 8.32 39 E7_Aa NovelBoundary 0 3.78 22.10 3.05 15.02 0.00 4.83 24.33 11.30 6.25 6.21 0.00 0.00 0.00 5.24 6.30 8.72 4.21 26.07 0.00 8.82 5.75 8.82 3.76 40 ER7a ExonRegion 0 4.28 17.77 12.97 45.21 12.74 0.00 4.79 5.69 11.73 12.13 5.19 2.89 2.20 2.19 6.49 3.54 6.63 88.49 15.95 50.35 11.68 46.42 14.40 41 E7_Da NovelBoundary 0 3.26 36.77 30.87 116.37 6.96 2.90 10.02 38.32 25.43 18.51 7.21 7.35 6.49 7.18 0.00 8.29 29.55 119.55 54.03 85.90 27.06 62.83 21.34 42 I7 Intron 0 9.53 32.74 11.10 80.71 16.27 3.30 11.48 13.63 12.44 13.47 5.66 5.07 3.91 3.03 2.92 4.02 5.57 69.18 22.23 47.43 17.11 37.30 23.80 43 I7_AR1 ActiveIntronRegion 0 9.55 32.81 11.12 80.89 16.30 3.31 11.50 13.66 12.47 13.50 5.67 5.09 3.92 3.04 2.93 4.02 5.59 69.34 22.27 47.53 17.15 37.38 23.86 44 E8_Aa NovelBoundary 0 21.11 47.29 9.49 65.13 6.71 0.00 19.83 12.77 6.66 5.16 7.37 0.00 0.00 7.06 5.81 6.75 8.04 71.92 4.80 54.90 13.34 43.60 25.61 45 ER8a ExonRegion 0 14.14 40.30 15.78 36.10 27.00 12.48 20.45 36.30 30.34 33.81 21.99 7.23 15.30 37.82 29.21 29.21 17.14 77.86 31.02 58.37 55.89 31.87 33.97 46 E8_Da NovelBoundary 0 13.56 19.54 24.69 49.21 17.15 0.00 15.46 18.11 19.39 24.90 2.68 0.00 21.91 14.72 13.35 47.17 12.16 78.06 17.69 47.30 14.02 5.88 44.05 47 E8a_E9a KnownJunction 0 17.71 49.46 11.15 30.40 15.79 25.78 14.31 39.97 25.52 19.05 19.37 0.00 13.64 23.07 8.90 20.76 18.14 61.35 22.21 42.95 37.93 36.13 28.17 48 I8 Intron 0 8.38 16.93 8.46 18.50 11.47 4.51 8.71 8.40 7.17 11.20 5.98 5.81 6.51 11.94 7.36 9.08 7.38 25.66 11.03 23.65 8.40 7.56 11.08 49 I8_AR1 ActiveIntronRegion 0 12.75 26.31 22.82 36.11 22.42 4.04 13.82 15.89 12.71 21.86 13.64 6.92 13.30 18.51 16.08 20.09 10.67 44.14 25.28 42.52 16.85 16.23 19.43 50 I8_SR1 SilentIntronRegion 0 6.15 14.05 4.97 15.96 9.28 5.10 9.27 4.81 6.05 7.92 1.81 9.27 7.40 16.31 4.52 6.89 7.03 29.41 14.32 14.32 2.79 12.50 15.16 51 I8_AR2 ActiveIntronRegion 0 13.13 46.56 12.68 39.16 35.82 9.58 12.43 13.72 10.23 17.62 12.82 21.65 9.57 29.73 14.80 17.10 19.33 51.47 21.19 32.74 6.25 12.93 27.03 52 I8_SR2 SilentIntronRegion 0 6.51 25.90 5.90 13.55 9.24 2.66 10.32 8.35 2.38 9.43 7.77 6.86 9.47 14.22 8.27 9.37 6.17 13.49 11.12 13.49 4.70 3.93 10.47 53 I8_AR3 ActiveIntronRegion 0 18.00 35.92 24.64 61.37 19.40 10.14 20.87 17.46 12.25 26.55 11.96 13.03 10.95 17.51 15.36 15.39 17.80 55.80 21.26 27.55 18.87 15.99 21.00 54 I8_SR3 SilentIntronRegion 0 6.10 11.22 3.68 8.20 7.60 3.99 5.66 4.62 5.69 5.62 3.52 4.22 4.51 8.76 4.22 5.43 4.54 16.17 5.64 18.90 6.10 3.69 7.00 55 I8_AR4 ActiveIntronRegion 0 7.31 12.83 3.01 11.25 7.93 2.32 6.12 11.33 4.61 13.82 4.91 1.17 2.60 8.24 5.77 7.96 6.99 19.75 7.15 26.51 5.66 5.04 7.10 56 E9_Aa NovelBoundary 0 32.30 15.72 9.67 39.16 11.88 8.69 8.66 26.62 9.61 20.36 9.84 0.00 0.00 14.89 8.90 4.36 12.90 53.39 9.04 55.48 26.13 6.06 18.10 57 ER9a ExonRegion 0 11.30 33.75 12.54 49.60 20.14 22.29 11.78 36.90 32.64 36.66 22.61 4.57 14.12 26.62 14.60 28.19 12.94 56.20 25.84 53.72 39.20 40.57 17.03 58 E9a_E10a KnownJunction 0 28.60 44.73 18.04 86.37 31.66 31.63 34.71 46.25 38.31 33.39 19.85 10.95 6.82 26.78 18.54 26.06 8.88 85.48 40.38 96.83 24.03 24.19 18.61 59 ER10a ExonRegion 0 26.00 56.27 16.73 84.67 40.37 29.64 23.54 51.08 44.60 56.85 37.00 6.48 13.04 33.34 24.22 38.80 23.11 87.76 33.81 82.58 50.34 48.38 28.77 60 E10a_E11a KnownJunction 0 26.52 88.93 21.85 104.58 72.24 38.27 43.99 51.51 52.89 62.86 35.17 18.76 27.43 35.96 33.01 17.17 17.58 86.02 42.73 71.78 72.16 72.87 46.78 61 E11_Aa NovelBoundary 0 3.78 3.16 4.61 1.73 8.23 0.00 7.60 8.95 8.77 4.70 0.00 0.00 0.00 5.00 0.00 4.36 14.12 13.89 12.05 3.26 0.00 6.25 0.00 62 ER11a ExonRegion 0 31.57 83.29 19.02 114.92 39.86 47.41 27.79 53.71 51.86 58.23 43.09 22.91 23.79 47.32 16.11 38.20 26.20 115.14 39.82 77.33 62.76 65.85 44.29 63 E11_Da NovelBoundary 0 0.00 2.57 7.01 7.42 0.00 0.00 2.21 12.49 16.96 17.35 11.27 12.00 0.00 4.94 0.00 0.00 4.49 8.62 19.29 20.26 11.74 3.12 6.83 64 E11a_E12a KnownJunction 0 43.79 102.15 15.64 136.35 43.63 23.05 15.63 75.74 52.72 63.07 64.28 29.41 33.28 18.78 28.93 55.71 27.68 111.80 48.00 76.51 50.60 87.07 26.80 65 I11 Intron 0 8.38 12.44 7.22 12.24 14.44 10.72 9.65 20.85 15.23 12.91 4.35 6.37 13.20 5.61 4.54 6.95 9.21 12.90 10.31 13.78 4.76 12.74 7.40 66 I11_AR1 ActiveIntronRegion 0 8.41 12.48 7.25 12.28 14.49 10.76 9.68 20.93 15.28 12.96 4.36 6.39 13.24 5.63 4.56 6.98 9.24 12.95 10.35 13.83 4.77 12.79 7.43 67 E12_Aa NovelBoundary 0 3.78 19.08 10.11 14.65 27.33 18.28 20.01 21.40 15.51 14.80 12.53 7.05 12.66 4.77 4.45 8.37 14.31 16.46 13.84 14.83 0.00 15.00 20.06 68 ER12a ExonRegion 0 42.22 92.70 25.13 105.19 65.99 41.32 44.12 62.36 60.33 75.71 43.78 24.80 46.05 44.23 34.70 51.65 26.62 95.53 62.34 86.87 64.77 88.24 39.09 69 E12_Da NovelBoundary 0 7.48 18.88 3.16 8.56 28.44 2.16 10.02 29.61 9.55 13.83 4.74 5.25 13.64 3.00 4.45 3.67 4.11 12.97 7.91 5.94 16.49 6.00 0.00 70 E12a_E13a KnownJunction 0 57.42 109.59 26.58 96.76 61.97 33.33 52.77 59.19 66.43 96.78 53.80 42.91 32.79 45.85 38.82 20.34 25.43 92.73 66.54 113.45 48.80 97.73 42.94 71 I12 Intron 0 9.61 21.20 7.73 12.58 18.78 8.33 12.85 17.02 9.31 14.12 6.19 6.70 12.30 2.19 1.30 3.07 3.41 11.01 9.21 9.23 3.41 22.59 10.00 72 I12_SR1 SilentIntronRegion 0 9.65 21.29 7.75 12.63 18.86 8.36 12.90 17.08 9.34 14.17 6.21 6.73 12.35 2.20 1.31 3.08 3.42 11.06 9.25 9.27 3.43 22.68 10.05 73 E13_Aa NovelBoundary 1 10.37 32.63 6.45 38.19 68.34 5.79 31.97 15.48 23.29 27.94 2.00 30.76 0.00 10.60 5.93 4.10 8.42 17.95 3.67 11.12 7.85 36.74 8.02 74 ER13a ExonRegion 0 60.47 134.90 46.81 169.24 93.58 48.24 47.21 79.01 65.60 74.38 33.70 37.43 36.70 39.73 28.82 40.34 28.50 74.97 51.43 75.35 41.44 86.33 51.56 75 IG7_SR2 SilentIntergenicRegion 0 4.50 0.86 1.08 1.09 2.72 1.09 1.34 0.87 0.62 0.61 0.16 1.05 0.79 0.41 0.87 1.76 1.12 0.00 0.00 0.18 2.61 12.59 4.20