Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM125A Gene 0 55.48 59.37 160.39 87.16 31.58 15.87 32.00 61.00 35.63 152.15 96.60 28.48 28.40 122.58 190.97 112.49 88.42 128.14 112.25 77.75 159.41 78.44 75.54 2 317040 Transcript 0 77.86 86.20 235.14 142.21 44.20 34.43 39.93 100.36 53.72 222.37 115.04 61.90 44.24 161.86 262.37 138.82 128.80 216.46 140.99 119.06 232.91 116.28 91.71 3 392702 Transcript 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 4 IG29 Intergenic 0 24.18 0.24 2.41 4.05 17.53 3.37 1.59 4.32 2.06 1.77 9.88 15.65 18.89 22.26 33.79 50.92 18.46 0.29 2.67 0.25 0.00 0.17 0.47 5 IG29_SR1 SilentIntergenicRegion 0 24.08 0.30 2.26 4.45 21.25 3.69 1.87 3.91 2.08 1.92 9.77 17.19 20.94 23.59 34.37 54.04 20.27 0.36 3.26 0.31 0.00 0.20 0.57 6 IG29_AR1 ActiveIntergenicRegion 0 24.74 0.00 3.08 2.25 0.67 1.91 0.28 6.21 1.97 1.14 10.41 8.70 9.67 16.29 31.32 36.96 10.28 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1a ExonRegion 0 60.55 62.80 40.01 16.90 15.79 11.49 31.92 12.21 7.94 33.52 25.37 6.24 4.06 37.44 59.45 28.09 27.07 22.12 29.26 21.18 53.14 27.59 22.10 8 E1a_E2a KnownJunction 1 13.41 21.58 87.13 24.91 7.98 0.00 8.04 23.08 13.02 54.40 60.12 17.41 6.82 29.31 29.30 14.36 67.60 26.12 32.47 18.73 158.83 10.47 15.54 9 E2_Aa NovelBoundary 0 14.15 9.41 0.00 3.00 8.32 2.27 2.08 3.94 1.77 8.17 2.58 5.40 0.00 0.00 19.04 22.90 4.77 7.34 4.42 0.00 3.09 32.64 3.84 10 ER2a ExonRegion 0 38.50 24.77 149.71 77.92 13.76 8.08 12.80 59.19 27.90 120.51 88.02 10.23 18.57 129.09 178.03 117.80 80.02 119.95 135.27 71.63 145.20 88.90 88.87 11 E2a_E3a KnownJunction 1 49.27 34.60 176.22 98.69 27.84 11.24 9.72 74.22 32.90 149.08 80.92 0.00 19.64 128.02 209.90 114.50 80.04 165.73 112.38 88.14 107.86 66.50 85.53 12 E3_Aa NovelBoundary 1 11.11 2.43 2.81 1.37 3.40 5.68 0.00 2.14 2.75 2.95 0.00 18.01 0.00 4.71 10.26 12.30 0.00 6.55 4.42 3.26 5.81 0.00 0.00 13 ER3a ExonRegion 0 44.43 51.01 190.83 95.11 54.12 26.09 50.09 62.85 41.04 156.96 113.34 16.47 28.87 137.16 196.12 114.66 98.62 145.40 79.21 90.15 184.18 101.94 76.56 14 E3_Da NovelBoundary 0 13.48 8.81 11.03 3.60 4.16 0.00 22.79 12.40 11.17 18.78 2.21 23.26 0.00 16.60 5.93 43.83 17.48 26.32 35.58 14.57 8.71 5.76 11.01 15 E3a_E4a KnownJunction 0 34.82 110.97 224.15 106.51 102.63 68.82 121.01 50.11 26.27 166.81 109.76 45.16 27.43 152.63 165.15 94.93 97.43 122.00 70.68 94.66 170.57 48.68 62.32 16 I3 Intron 0 20.69 18.61 22.37 24.46 20.44 3.92 16.14 17.73 12.41 35.52 14.50 18.24 19.56 24.08 45.96 46.43 22.04 39.52 35.74 22.11 12.44 8.60 17.99 17 I3_AR1 ActiveIntronRegion 0 16.08 14.69 18.69 15.28 19.52 2.92 11.43 8.25 7.72 24.52 11.30 17.37 12.68 21.77 46.43 45.68 13.63 26.83 25.36 17.48 11.14 5.45 18.00 18 I3_SR1 SilentIntronRegion 0 15.67 28.68 12.97 18.14 32.99 5.31 24.29 13.47 5.46 15.44 15.98 26.49 28.42 32.68 52.35 41.57 19.90 19.28 49.97 13.40 14.90 6.69 14.99 19 I3_AR3 ActiveIntronRegion 0 28.06 21.51 29.70 36.88 20.28 4.92 20.28 29.28 19.47 53.70 18.62 18.58 25.92 25.79 47.26 51.62 32.31 59.34 45.77 30.24 14.27 12.82 19.94 20 E4_Aa NovelBoundary 0 9.26 27.56 32.49 36.59 24.11 8.35 15.99 9.69 10.13 36.24 6.95 25.81 6.82 11.77 5.56 28.71 33.01 31.17 9.04 37.97 18.97 2.76 15.45 21 ER4a ExonRegion 0 67.51 111.22 239.36 130.96 42.94 23.38 61.55 90.95 53.26 217.97 150.89 52.29 49.19 142.64 226.89 117.32 121.43 118.10 119.16 132.45 223.23 83.46 51.31 22 E4_Da NovelBoundary 0 168.62 21.90 42.31 48.68 28.27 5.28 11.84 25.18 12.67 45.34 26.64 0.00 25.97 52.50 68.73 118.69 43.67 57.45 43.20 56.63 40.46 14.08 46.86 23 E4a_E5a KnownJunction 0 103.20 138.13 230.71 161.95 32.77 38.84 31.53 109.01 45.37 211.83 102.97 50.12 45.29 113.72 249.71 149.53 92.75 227.21 104.76 109.94 197.69 129.69 94.75 24 E4a_E6a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 0.00 0.00 25 I4 Intron 0 32.07 12.94 8.93 15.55 18.75 2.39 10.35 5.88 4.50 16.71 9.76 7.26 5.95 22.44 23.27 31.48 10.76 12.27 18.68 6.24 7.53 5.09 10.06 26 I4_AR1 ActiveIntronRegion 0 35.61 17.13 11.04 18.69 25.32 1.93 13.23 8.13 3.87 19.78 13.21 9.64 7.57 19.26 26.38 35.94 9.55 11.11 18.42 7.27 10.43 7.12 11.60 27 I4_SR1 SilentIntronRegion 0 26.75 6.21 5.57 10.62 8.16 3.18 5.77 2.25 5.62 11.92 4.21 3.44 3.37 28.08 18.52 24.59 12.95 14.40 19.44 4.64 2.86 1.82 7.68 28 E5_Aa NovelBoundary 0 39.34 5.46 20.19 19.74 12.31 5.56 6.32 8.05 10.04 18.99 13.69 0.00 0.00 25.72 13.35 17.43 12.72 19.11 9.51 8.69 17.85 7.78 8.11 29 ER5a ExonRegion 0 66.35 83.51 241.76 146.54 50.08 23.29 41.01 94.88 59.83 239.96 140.81 52.75 41.00 201.50 320.44 178.15 164.52 255.25 166.20 121.65 240.28 128.78 113.11 30 E5a_E6a KnownJunction 0 64.01 36.97 232.96 118.13 49.75 41.17 47.25 97.18 55.96 215.33 101.34 82.83 46.43 170.35 216.95 88.78 129.13 166.93 152.00 125.60 260.76 90.38 67.27 31 ER6a ExonRegion 0 56.63 62.76 234.13 166.65 41.41 20.05 32.10 104.26 57.85 241.46 138.19 58.87 44.01 177.99 295.01 207.08 137.59 237.20 199.49 107.00 220.29 130.17 133.41 32 E6a_E7a KnownJunction 0 158.77 173.52 433.10 292.10 92.11 12.15 75.25 178.47 97.66 388.72 227.95 55.52 74.18 296.84 561.84 343.59 216.64 445.46 463.73 169.32 404.52 208.07 269.75 33 ER7a ExonRegion 0 127.30 95.22 314.53 169.09 50.58 13.19 52.49 121.27 70.90 286.56 202.95 32.26 66.80 232.46 380.81 265.81 181.28 292.36 287.66 137.51 353.66 153.47 155.93 34 E7a_E8a KnownJunction 0 64.16 79.06 239.88 98.09 51.10 7.78 32.55 108.27 55.38 230.80 152.62 42.46 74.02 156.45 200.63 130.48 121.08 152.76 161.23 78.49 251.56 74.09 92.79 35 ER8a ExonRegion 0 54.96 65.90 200.87 97.51 32.06 8.27 29.45 98.43 42.90 213.83 119.43 31.60 35.55 154.21 193.11 110.65 99.49 126.59 120.65 79.77 190.33 74.42 97.94 36 E8a_E9a KnownJunction 0 84.76 117.54 234.32 120.90 34.21 25.10 32.46 107.12 46.44 228.54 109.29 38.11 44.64 158.57 188.89 97.92 85.93 144.34 124.80 90.95 162.23 83.03 87.50 37 ER9a ExonRegion 0 41.68 37.39 110.77 51.89 22.80 13.07 17.53 36.98 23.34 111.24 65.26 21.86 20.09 89.20 144.08 78.47 53.13 84.19 81.68 53.73 109.28 51.39 61.24