Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GTPBP3 Gene 0 30.31 44.25 100.11 55.42 36.64 43.06 25.98 59.79 51.31 68.47 64.24 21.49 21.84 95.43 93.75 64.90 52.70 93.00 72.60 79.38 34.08 21.15 27.45 2 324894 Transcript 0 26.38 30.13 83.59 71.35 11.80 26.35 17.75 46.82 50.26 82.90 60.07 6.30 25.16 62.57 67.62 68.87 47.59 98.87 94.03 81.69 31.57 11.57 29.36 3 358792 Transcript 0 12.83 5.81 33.27 25.25 18.70 17.54 10.25 12.83 7.21 27.51 9.31 1.65 5.56 21.23 31.64 26.96 21.17 37.51 27.29 25.22 3.43 4.19 10.35 4 IG25_AR2 ActiveIntergenicRegion 0 9.38 3.65 10.30 7.94 11.91 9.60 6.77 6.32 6.05 7.83 10.27 4.30 4.29 9.94 7.54 11.14 5.67 16.36 16.19 15.69 6.88 1.95 5.50 5 ER1a ExonRegion 1 23.43 22.01 19.54 10.34 34.38 26.68 27.14 8.47 7.34 15.68 57.20 4.37 9.26 42.97 45.68 52.24 28.78 10.24 118.05 20.54 25.83 13.68 31.78 6 E1_Da NovelBoundary 0 10.30 2.83 13.69 5.46 19.10 2.73 6.62 0.00 5.21 18.05 2.68 6.30 0.00 4.89 0.00 11.96 9.07 45.60 4.24 14.76 5.75 2.82 3.93 7 E1a_E2a KnownJunction 0 10.52 9.27 29.30 12.92 3.74 10.33 3.84 10.51 10.45 22.16 16.90 11.40 7.30 7.65 0.00 19.14 12.06 18.99 16.28 19.75 10.87 0.00 0.00 8 I1 Intron 1 7.55 8.77 14.93 12.38 15.91 9.00 8.46 5.74 11.77 12.71 15.23 6.97 2.30 16.32 15.83 15.91 8.34 24.71 21.79 16.13 9.83 4.34 12.23 9 I1_SR1 SilentIntronRegion 1 5.55 7.26 15.74 14.67 13.35 9.89 5.45 6.29 14.45 12.09 14.32 7.29 1.34 15.19 13.53 17.06 7.37 26.01 24.79 19.19 8.91 4.81 11.99 10 I1_AR1 ActiveIntronRegion 1 10.61 11.11 13.97 9.19 19.91 7.81 13.02 5.02 7.99 13.79 16.79 6.59 3.74 18.21 19.45 14.45 9.90 23.12 17.68 11.87 11.32 3.70 12.75 11 E2_Aa NovelBoundary 0 6.15 16.18 13.99 1.93 3.99 5.45 11.13 10.68 8.16 12.49 22.58 5.40 0.00 11.48 23.49 11.71 15.05 17.95 9.41 12.14 2.47 0.00 11.18 12 ER2a ExonRegion 0 7.05 10.44 50.90 20.78 12.41 16.12 5.71 24.05 18.54 31.72 54.10 7.09 8.77 67.71 57.28 52.08 37.27 65.56 67.06 48.16 28.53 13.00 23.09 13 E2a_E3a KnownJunction 0 3.11 20.52 71.61 38.59 32.17 56.79 29.54 33.56 37.33 54.85 50.85 12.60 0.00 36.73 80.85 54.60 32.73 70.30 43.77 53.95 35.52 10.23 23.65 14 E3_Aa NovelBoundary 0 9.11 0.00 13.69 7.39 7.72 23.17 15.10 5.13 5.90 6.80 17.11 5.85 6.17 9.36 13.97 7.01 16.55 22.76 4.80 5.43 5.56 0.00 3.33 15 ER3a ExonRegion 1 21.51 26.39 83.72 36.58 26.54 48.25 28.37 57.16 43.64 58.47 68.47 7.71 11.21 94.14 72.40 50.49 33.54 93.30 49.35 90.95 29.38 12.57 24.24 16 E3a_E4a KnownJunction 0 83.05 37.95 118.68 61.00 39.30 81.54 14.44 84.24 56.13 75.29 60.86 19.51 41.23 177.41 104.33 75.45 38.52 109.52 69.93 132.88 38.80 11.39 33.80 17 E4_Aa NovelBoundary 0 10.52 2.89 21.52 9.56 4.24 0.00 0.00 21.28 4.77 18.37 10.16 0.00 0.00 5.18 13.60 27.77 10.85 28.60 22.59 6.26 2.59 0.00 7.94 18 ER4a ExonRegion 0 19.83 22.04 96.98 56.09 17.91 24.25 15.06 57.65 51.29 65.05 51.75 7.51 14.51 90.41 94.30 43.31 41.94 87.92 55.12 67.74 42.13 8.15 19.28 19 E4_Da NovelBoundary 0 19.56 3.35 38.64 20.98 18.76 26.58 8.21 13.68 12.59 19.07 15.90 0.00 0.00 36.20 37.46 51.35 8.98 47.30 16.00 21.22 26.07 5.27 7.09 20 E4a_E5a KnownJunction 0 16.37 18.02 100.62 69.39 29.03 34.07 17.80 61.41 66.98 71.94 55.54 0.00 13.64 89.82 72.44 24.87 24.87 133.89 64.38 61.10 36.45 13.41 23.56 21 I4 Intron 0 4.58 6.85 18.89 12.70 7.72 7.50 6.69 8.67 7.08 11.51 10.69 3.31 7.50 21.68 18.80 15.73 10.32 22.97 12.26 12.80 6.88 1.50 2.83 22 I4_AR1 ActiveIntronRegion 0 4.88 7.37 20.53 13.90 8.48 7.85 7.22 9.40 7.52 12.59 11.59 3.63 7.90 23.12 20.04 16.60 11.03 24.76 12.86 14.01 7.43 1.65 3.10 23 E5_Aa NovelBoundary 0 6.37 3.35 28.18 15.18 3.74 5.05 0.00 17.37 10.59 20.28 0.00 0.00 5.84 9.30 20.64 36.06 13.00 15.63 22.40 17.45 6.30 4.96 3.84 24 ER5a ExonRegion 0 21.54 22.76 99.26 78.60 26.61 43.28 21.89 54.81 61.03 77.19 55.37 16.49 14.20 110.82 97.73 76.83 44.36 124.13 102.32 69.08 33.36 12.30 30.09 25 E5_Da KnownBoundary 0 13.26 0.00 40.48 34.03 12.73 7.55 7.95 14.50 5.79 21.19 7.48 0.00 12.99 27.02 32.51 23.07 20.76 28.11 33.98 23.20 5.87 0.00 4.35 26 E5a_E5b KnownJunction 0 26.38 30.13 83.59 71.35 11.80 26.35 17.75 46.82 50.26 82.90 60.07 6.30 25.16 62.57 67.62 68.87 47.59 98.87 94.03 81.69 31.57 11.57 29.36 27 ER5b ExonRegion 0 12.83 5.81 33.27 25.25 18.70 17.54 10.25 12.83 7.21 27.51 9.31 1.65 5.56 21.23 31.64 26.96 21.17 37.51 27.29 25.22 3.43 4.19 10.35 28 E5_Ab KnownBoundary 0 7.04 5.85 20.34 22.37 18.59 33.67 3.67 12.32 13.25 25.22 11.90 0.00 6.49 19.25 19.04 34.52 4.21 15.09 24.94 21.03 6.30 5.88 7.51 29 ER5c ExonRegion 0 20.93 38.31 109.54 71.18 28.80 31.89 16.44 55.25 58.43 88.31 60.91 9.20 19.94 86.61 84.42 71.89 63.87 127.04 64.38 88.01 30.45 14.28 29.86 30 E5b_E6a KnownJunction 0 2.96 46.24 117.68 78.21 30.90 41.79 24.60 47.69 61.34 75.05 63.81 12.30 6.82 92.83 107.55 101.34 64.61 121.71 112.29 72.99 25.39 12.31 30.56 31 ER6a ExonRegion 0 18.13 35.71 104.28 66.91 30.30 35.80 23.90 43.14 51.63 77.28 67.79 9.13 11.16 90.50 84.84 78.28 58.76 119.20 61.65 96.21 31.89 20.12 24.22 32 E6_Da NovelBoundary 0 3.48 2.50 14.40 17.65 19.61 8.52 3.67 4.85 18.55 15.12 17.43 0.00 0.00 33.61 49.08 7.95 3.83 16.00 0.00 11.51 15.01 6.00 0.00 33 E6a_E7a KnownJunction 0 2.82 20.19 108.81 36.76 30.65 30.95 32.28 56.31 34.61 78.68 59.33 5.40 6.17 53.15 55.63 84.00 49.09 96.09 81.23 93.89 23.91 25.84 26.97 34 I6 Intron 0 9.58 7.02 10.24 6.57 9.23 6.92 3.14 5.28 3.97 6.27 11.05 9.45 8.21 25.34 18.90 18.59 8.90 13.96 8.93 13.54 3.33 2.70 4.75 35 I6_SR1 SilentIntronRegion 0 10.32 11.45 6.58 8.52 12.75 9.03 3.40 3.74 4.80 7.89 13.89 14.38 11.71 35.35 30.94 28.34 11.83 9.91 13.70 15.16 3.93 4.01 6.27 36 I6_AR2 ActiveIntronRegion 0 9.00 2.26 15.12 3.39 4.01 6.04 2.95 7.06 3.51 5.12 8.02 3.52 6.55 18.25 11.63 11.52 8.14 19.71 3.69 13.31 3.21 2.21 3.66 37 E7_Aa NovelBoundary 0 23.63 9.60 42.81 10.75 0.00 13.97 3.93 16.31 12.50 21.17 27.48 0.00 6.66 29.55 22.25 16.49 17.58 41.91 30.21 19.75 3.03 2.51 12.04 38 ER7a ExonRegion 0 17.44 34.11 112.94 49.08 17.22 41.07 16.49 45.22 46.40 68.53 56.28 8.41 13.75 105.94 94.41 58.46 48.48 111.51 53.45 86.46 37.62 15.17 20.61 39 E7a_E8a KnownJunction 0 59.34 50.85 136.36 64.76 30.98 47.81 35.64 59.27 52.05 81.18 41.12 6.30 19.64 123.20 108.41 54.86 39.74 142.14 53.74 76.57 34.53 24.68 17.93 40 ER8a ExonRegion 0 45.29 66.17 119.82 66.79 53.41 57.26 36.41 82.13 65.57 81.18 75.09 36.96 32.68 110.93 113.57 74.24 62.88 98.03 82.29 92.18 37.30 30.26 32.31