Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 EPS15L1 Gene 0 67.48 172.62 152.96 87.35 58.32 65.09 64.83 95.97 101.96 128.14 190.95 117.88 95.98 160.29 143.30 164.46 124.59 182.73 102.66 124.61 83.88 67.81 68.87 2 455140 Transcript 0 21.63 30.33 57.49 24.94 25.09 39.31 24.51 22.32 26.19 30.52 46.01 13.86 11.44 38.14 47.90 33.15 29.63 46.00 27.85 30.84 25.22 18.86 25.71 3 248070 Transcript 0 44.44 69.42 58.33 36.64 20.57 23.59 23.38 50.24 47.55 54.33 48.62 26.14 26.59 40.10 43.14 38.12 24.48 68.13 38.82 35.21 20.80 19.93 23.67 4 ER1a ExonRegion 0 15.87 41.18 8.46 4.63 22.48 47.95 46.47 0.86 2.96 6.48 37.98 0.00 0.94 53.76 53.24 36.56 34.99 15.80 24.69 22.98 11.57 7.60 24.96 5 ER1b ExonRegion 1 79.76 196.24 39.37 25.64 91.19 188.93 195.14 16.15 24.12 62.60 142.42 2.05 7.28 208.10 166.59 252.00 133.60 148.16 99.84 119.76 67.21 80.38 115.22 6 E1a_E2a KnownJunction 0 112.76 286.46 72.32 54.84 142.19 253.38 260.56 45.51 44.85 111.61 158.36 50.27 51.13 143.68 64.78 356.06 185.69 270.36 150.40 154.62 82.29 121.24 160.91 7 I1_AR1 ActiveIntronRegion 0 15.50 6.32 8.48 7.69 6.34 4.97 9.18 7.27 6.07 3.73 2.22 8.40 9.42 1.13 11.07 10.77 9.20 17.07 12.70 17.78 1.14 1.05 6.55 8 ER2a ExonRegion 0 37.49 126.61 43.44 29.85 65.05 80.25 94.51 22.96 31.29 73.65 79.62 34.53 34.39 50.27 35.92 119.59 61.30 175.49 54.23 59.93 34.26 37.90 71.81 9 E2a_E3a KnownJunction 1 16.89 76.30 14.31 10.02 44.31 13.17 24.69 13.76 13.66 16.60 36.85 93.48 73.86 28.96 19.16 41.53 13.00 53.56 12.24 30.49 13.28 8.33 22.88 10 ER3a ExonRegion 0 19.40 70.00 57.46 29.74 8.53 4.18 16.49 39.41 39.89 69.96 230.83 99.87 61.28 88.10 71.27 83.38 164.42 75.14 43.57 85.67 83.13 28.75 31.49 11 E3a_E4a KnownJunction 1 41.12 141.69 97.72 74.92 4.16 0.00 17.93 80.75 77.52 135.79 358.78 152.90 58.76 228.86 184.93 129.62 244.23 111.76 132.80 221.35 129.86 90.50 54.89 12 ER4a ExonRegion 0 36.07 166.80 75.95 47.93 15.27 5.42 24.41 62.30 70.40 119.61 210.20 100.57 58.33 270.38 227.02 295.11 127.77 176.31 169.16 160.06 84.84 106.04 108.17 13 E4a_E5a KnownJunction 1 40.38 300.47 69.04 32.30 20.80 12.44 56.93 46.09 69.96 98.13 163.36 134.89 78.89 184.47 165.40 385.63 113.88 194.75 129.23 144.20 85.69 91.67 151.18 14 E4a_E7a NovelJunction 0 0.00 0.00 1.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 14.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 I4_AR1 ActiveIntronRegion 0 4.47 5.38 7.24 1.23 28.99 13.43 28.70 6.92 5.00 6.81 4.56 4.53 3.50 0.00 5.34 8.74 1.99 8.31 8.22 5.65 2.58 0.63 1.29 16 ER5a ExonRegion 0 21.14 198.76 141.06 83.35 74.61 112.19 112.66 90.96 100.19 123.58 193.37 173.49 116.03 145.29 139.96 164.43 130.42 172.90 68.65 147.58 71.44 77.46 77.45 17 E5a_E6a KnownJunction 0 13.63 174.97 170.66 145.30 124.45 164.34 200.90 127.62 134.43 135.04 202.79 233.03 105.84 186.18 195.69 181.49 128.66 166.64 117.27 172.51 86.30 114.08 97.40 18 I5_SR2 SilentIntronRegion 0 10.11 16.00 2.67 3.42 4.82 0.00 18.33 0.00 1.56 2.63 3.87 1.92 10.32 2.38 3.61 14.33 3.08 4.31 7.72 4.35 0.00 2.08 4.11 19 ER6a ExonRegion 0 22.44 180.15 148.52 121.43 50.97 67.12 88.01 129.00 140.69 153.89 257.17 205.62 121.49 206.73 135.12 189.84 177.10 190.35 80.04 201.82 111.55 104.08 84.14 20 E6a_E7a KnownJunction 0 75.64 227.00 164.72 123.13 31.66 23.34 34.40 159.57 148.26 193.92 281.60 324.11 211.51 246.16 148.34 213.70 167.27 247.35 55.91 242.50 110.95 104.40 96.97 21 ER7a ExonRegion 0 49.89 182.30 131.98 87.98 36.21 31.48 49.88 112.83 130.56 152.85 323.36 224.10 178.22 225.86 194.73 238.86 163.92 227.42 122.66 185.58 113.86 128.14 93.46 22 E7a_E8a KnownJunction 1 41.86 240.55 77.17 58.17 32.09 11.58 44.25 74.84 81.13 123.70 233.32 155.90 143.66 190.54 78.50 140.48 89.67 166.44 62.50 102.27 111.45 79.73 88.78 23 E8_Aa NovelBoundary 0 0.00 2.96 8.63 13.45 29.03 2.50 7.11 4.11 6.11 5.18 2.37 0.00 0.00 0.00 5.69 0.00 12.90 13.02 16.00 23.20 3.03 3.12 0.00 24 ER8a ExonRegion 0 38.06 176.41 77.38 63.49 24.84 16.53 30.74 77.72 99.57 129.93 259.27 196.63 132.73 168.31 122.53 141.97 129.23 174.98 58.24 107.20 105.37 58.51 56.87 25 E8a_E9a KnownJunction 0 48.16 143.99 100.20 82.01 7.56 28.56 36.57 93.11 119.76 137.48 249.69 167.30 104.86 142.33 163.05 160.21 121.93 223.81 71.72 169.38 84.82 98.71 71.45 26 ER9a ExonRegion 0 35.12 81.34 68.36 36.86 27.92 36.22 32.90 54.81 72.31 94.22 181.62 106.66 116.29 157.63 158.29 159.24 117.27 158.25 84.41 128.35 82.27 51.87 52.91 27 E9a_E10a KnownJunction 1 50.75 65.51 86.01 56.14 23.85 42.02 39.57 78.82 83.04 115.02 227.85 48.02 25.32 159.93 178.01 115.53 128.38 142.52 73.60 115.82 125.04 24.43 23.65 28 ER10a ExonRegion 0 32.31 59.32 114.33 53.07 33.36 43.78 52.51 74.67 106.06 139.02 252.48 98.21 99.71 216.31 174.22 199.96 185.73 241.94 99.03 161.82 106.88 45.65 48.19 29 E10a_E11a KnownJunction 0 18.97 47.29 102.01 67.52 42.87 86.83 56.70 87.65 107.20 125.58 218.27 80.88 73.21 185.24 161.32 138.00 162.51 198.89 96.66 149.63 107.49 36.68 49.94 30 ER11a ExonRegion 0 37.36 92.97 107.89 67.96 55.61 60.84 56.36 81.13 102.14 127.46 225.88 114.69 96.13 262.01 166.11 215.19 154.34 182.17 122.57 139.23 101.85 56.85 71.62 31 E11a_E12a KnownJunction 0 38.15 113.01 92.63 46.38 20.88 55.88 37.10 82.97 78.65 94.02 132.19 122.59 67.04 179.12 158.35 135.43 121.36 131.16 54.87 94.53 48.12 44.46 52.50 32 ER12a ExonRegion 0 58.30 153.96 117.14 76.88 62.16 71.26 65.67 94.74 102.62 140.19 240.04 144.53 114.63 228.96 145.97 194.09 173.57 166.62 126.64 119.07 93.71 66.45 86.02 33 E12a_E13a KnownJunction 0 123.06 179.18 170.10 134.88 130.73 77.63 164.73 134.02 124.97 180.86 290.23 239.18 99.02 327.51 198.16 240.28 190.65 219.79 162.55 190.09 102.24 109.61 128.13 34 ER13a ExonRegion 0 124.47 274.98 174.05 121.65 96.07 101.86 102.09 138.68 126.68 198.73 286.39 201.53 199.04 301.93 217.67 282.92 231.70 216.84 148.14 172.54 123.05 85.62 101.94 35 E13a_E14a KnownJunction 0 96.76 292.97 202.89 121.53 74.79 127.43 115.22 145.81 144.01 211.08 306.02 203.17 297.22 309.73 297.18 272.75 195.79 242.30 207.06 180.76 140.61 78.38 141.70 36 ER14a ExonRegion 0 69.71 241.26 197.96 131.13 60.68 93.68 79.57 127.40 138.10 184.09 294.48 240.69 187.46 249.44 215.03 228.93 169.65 215.59 136.68 185.89 99.37 86.32 88.24 37 E14a_E15a KnownJunction 0 105.35 273.37 278.11 186.79 91.09 39.30 86.51 127.70 147.63 171.43 333.61 216.67 220.76 269.06 270.60 360.08 141.19 343.86 183.16 210.10 114.10 109.49 117.63 38 ER15a ExonRegion 0 105.89 285.03 241.42 154.02 89.10 104.32 106.83 129.06 141.17 164.11 307.94 208.23 165.60 269.01 234.02 290.25 167.30 284.07 143.53 197.36 118.72 89.25 109.16 39 E15a_E16a KnownJunction 0 158.84 329.28 251.11 137.88 112.22 86.43 115.00 129.63 168.60 178.07 304.08 143.75 114.28 272.00 242.66 301.97 235.25 352.85 130.17 201.59 113.11 67.85 118.31 40 ER16a ExonRegion 0 96.85 271.50 205.19 105.00 56.92 83.20 82.65 118.74 128.99 159.98 249.71 114.27 90.05 224.05 183.18 233.18 181.99 248.86 119.75 153.54 97.84 77.99 85.84 41 E16_Da NovelBoundary 0 10.45 14.87 9.76 12.45 15.70 19.19 18.95 25.22 16.26 13.83 109.66 42.91 34.09 91.82 37.46 99.97 48.25 28.11 22.59 24.86 25.70 16.29 23.30 42 E16a_E17a KnownJunction 0 108.69 362.57 242.69 103.78 45.84 151.84 99.32 124.29 152.14 162.89 161.30 97.98 33.93 156.10 112.74 178.07 227.96 163.33 93.27 114.35 39.85 87.44 61.97 43 E16a_E18a NovelJunction 1 0.00 8.55 6.86 3.50 0.00 2.84 1.99 12.28 4.83 1.21 8.05 0.00 6.82 4.94 27.57 8.72 13.37 12.89 4.05 2.62 7.97 8.70 3.24 44 I16 Intron 0 15.92 9.45 9.37 7.94 9.91 2.79 13.32 13.56 11.80 9.83 71.97 49.54 44.38 63.61 47.63 62.89 36.57 21.78 12.28 17.48 24.45 11.91 18.39 45 I16_AR1 ActiveIntronRegion 1 16.14 10.55 9.76 8.83 10.58 3.12 13.53 16.66 13.36 11.64 96.60 63.52 57.46 85.86 60.20 81.13 44.71 22.85 12.43 18.06 29.49 15.06 20.08 46 I16_SR1 SilentIntronRegion 0 20.73 9.38 6.84 4.10 6.94 4.23 12.59 6.68 11.14 3.94 7.24 15.85 8.03 4.54 8.85 11.99 9.51 6.88 4.59 14.71 3.80 1.80 11.85 47 I16_AR4 ActiveIntronRegion 0 14.67 6.20 9.45 6.57 9.15 1.36 13.70 5.71 7.31 6.00 10.54 14.26 12.77 8.24 18.83 18.96 18.91 24.18 15.01 17.50 14.86 4.81 15.74 48 I16 Intron 0 26.43 15.83 14.87 12.94 8.33 4.45 17.92 11.19 11.73 10.09 14.90 24.10 27.05 15.47 19.84 26.46 19.83 18.09 8.99 17.40 9.09 5.81 17.01 49 I16_AR1 ActiveIntronRegion 0 25.81 17.94 16.31 12.61 4.23 3.76 11.69 13.52 13.15 11.68 17.60 14.54 25.93 18.71 26.98 33.12 21.64 26.40 9.74 20.71 13.97 3.39 20.83 50 I16_SR1 SilentIntronRegion 0 26.77 14.77 14.16 13.12 10.41 4.80 21.09 10.02 11.02 9.29 13.55 28.96 27.64 13.86 16.24 23.13 18.94 13.90 8.62 15.75 6.63 7.03 15.09 51 E17_Aa NovelBoundary 0 26.15 21.97 12.12 17.01 44.06 0.00 28.79 43.42 21.09 23.93 14.85 29.71 14.12 13.19 20.77 20.34 31.04 20.85 19.20 21.60 20.82 6.12 3.67 52 ER17a ExonRegion 0 162.89 438.25 272.04 163.11 154.65 103.25 129.62 160.05 164.85 208.64 214.52 101.04 99.78 186.79 184.23 244.60 186.31 297.04 173.37 143.26 97.66 112.93 90.56 53 E17a_E18a KnownJunction 0 239.75 514.32 304.60 183.39 169.27 101.19 161.02 185.20 157.84 239.13 192.47 211.42 96.91 260.76 336.24 289.50 177.56 306.76 212.99 188.88 86.74 157.25 104.40 54 ER18a ExonRegion 0 138.40 421.91 328.69 174.02 131.32 118.01 122.58 194.37 158.41 240.13 221.79 206.80 135.18 198.52 250.02 225.53 184.46 304.12 229.85 211.01 115.76 132.49 68.23 55 E18a_E19a KnownJunction 0 142.32 426.37 358.98 176.57 141.09 152.36 139.86 212.89 148.09 222.23 258.75 182.91 132.46 138.68 255.89 206.27 199.35 247.48 201.61 201.34 145.42 128.71 96.55 56 ER19a ExonRegion 0 177.35 367.65 403.46 228.90 148.92 123.16 146.31 225.91 197.92 263.14 252.29 191.35 147.75 220.23 211.79 261.07 201.31 338.66 219.65 219.18 142.50 141.97 127.35 57 E19a_E20a KnownJunction 0 269.53 606.27 466.99 243.89 169.27 157.92 175.90 265.54 207.61 297.85 275.54 287.79 205.18 295.84 370.98 316.33 223.19 411.18 321.99 268.71 173.22 112.24 118.14 58 ER20a ExonRegion 0 128.76 378.21 302.33 152.98 111.33 108.16 112.93 189.11 161.80 203.08 237.27 192.55 116.17 188.56 194.53 188.56 154.76 287.73 188.20 196.20 96.49 100.59 83.04 59 E20a_E21a KnownJunction 0 99.65 343.69 242.10 133.42 123.77 103.86 80.77 148.89 148.73 171.38 241.96 176.46 125.15 166.11 152.67 142.87 123.80 195.95 108.99 185.17 75.43 82.24 59.75 60 ER21a ExonRegion 0 130.82 297.71 238.76 105.09 83.79 91.05 73.23 138.92 150.15 164.62 183.46 111.26 95.95 140.71 116.92 132.89 114.66 217.48 119.05 115.43 97.89 75.01 77.38 61 E21_Da NovelBoundary 0 43.04 17.76 9.37 6.13 0.00 9.31 5.74 8.71 11.72 16.55 0.00 17.56 12.17 16.30 0.00 12.13 27.12 36.77 13.93 46.40 21.00 5.51 12.04 62 E21a_E22a KnownJunction 0 54.08 167.93 190.83 68.12 59.85 44.41 32.24 96.15 99.16 136.59 60.17 24.16 33.93 43.68 49.69 68.53 39.36 171.04 101.18 60.02 43.31 37.78 40.89 63 E21a_E23a NovelJunction 0 35.56 193.39 49.97 38.22 7.64 13.06 16.16 56.31 12.27 54.29 60.75 68.12 32.95 49.91 53.40 55.63 46.00 114.91 39.15 41.23 13.71 5.45 21.68 64 E21a_E24a NovelJunction 0 30.97 9.14 22.29 18.35 0.00 2.38 14.62 15.28 6.34 9.83 55.75 64.67 44.32 44.03 46.11 44.86 18.51 25.45 32.10 17.96 21.62 30.62 31.16 65 I21 Intron 0 8.48 7.83 9.62 6.14 3.78 2.85 8.31 7.68 10.78 8.87 7.68 5.99 5.26 9.07 12.69 12.64 11.78 27.30 11.37 24.25 8.85 5.77 13.80 66 I21_SR1 SilentIntronRegion 0 7.15 8.02 9.10 4.34 4.29 4.00 8.27 5.90 11.25 7.87 8.59 5.32 6.11 13.05 13.98 14.79 12.63 36.15 10.79 31.42 10.50 3.95 15.10 67 I21_AR1 ActiveIntronRegion 0 9.23 8.74 12.37 6.28 5.05 2.60 9.86 9.39 11.05 11.54 10.36 7.92 5.52 15.02 18.82 14.77 16.42 32.18 14.56 26.97 8.95 5.49 13.30 68 I21_SR2 SilentIntronRegion 0 8.41 7.37 8.44 6.46 3.07 2.72 7.60 7.25 10.57 7.83 6.23 5.23 4.98 5.45 9.55 11.20 9.43 23.22 9.99 21.53 8.47 6.29 13.80 69 ER22a ExonRegion 0 58.61 144.38 145.17 63.07 48.20 45.22 36.38 96.56 85.82 98.94 68.74 54.17 34.31 47.44 47.82 67.96 50.38 133.52 77.84 70.23 68.76 44.66 52.79 70 E22a_E23a KnownJunction 0 64.23 124.12 166.08 44.12 27.59 47.25 39.66 92.62 93.17 98.13 45.70 61.37 19.64 39.44 13.35 48.19 29.45 96.96 29.27 46.60 40.34 38.70 53.44 71 I22_AR1 ActiveIntronRegion 0 4.27 6.14 2.14 6.16 1.80 2.15 5.49 5.25 9.07 2.29 8.76 2.16 4.43 6.23 2.59 24.93 7.75 11.24 18.17 6.42 7.02 5.71 39.46 72 I22_SR2 SilentIntronRegion 0 11.20 13.01 4.26 2.45 21.11 0.86 17.46 6.32 11.31 5.66 4.71 10.98 6.35 5.74 4.47 8.57 4.36 3.30 2.39 9.67 3.31 3.91 9.90 73 I22_AR4 ActiveIntronRegion 0 10.49 19.70 33.92 16.47 7.46 3.95 10.37 11.59 16.47 19.66 10.67 3.65 3.93 7.03 12.64 11.21 11.54 31.98 12.23 24.24 9.28 7.02 14.57 74 I22_SR5 SilentIntronRegion 0 29.08 28.10 35.64 25.76 18.33 3.22 20.24 23.33 24.92 21.62 11.55 14.75 14.34 8.69 13.44 16.57 11.09 22.22 16.32 21.89 6.41 15.92 21.83 75 E23_Aa NovelBoundary 0 26.45 51.04 46.01 33.10 16.38 6.98 23.80 26.74 17.27 13.78 15.85 6.30 39.61 9.54 4.94 15.81 17.11 38.76 4.42 23.01 20.88 6.18 24.16 76 ER23a ExonRegion 0 70.42 160.37 167.97 79.85 68.14 87.78 62.02 96.35 92.46 112.90 89.29 81.10 58.90 71.63 92.01 84.62 37.91 152.15 87.18 62.91 52.15 34.02 50.02 77 E23_Da KnownBoundary 0 127.95 153.99 146.03 59.83 36.42 46.34 37.41 102.03 75.14 99.31 91.18 47.87 33.76 98.89 91.11 97.15 36.00 160.96 105.04 51.13 20.51 14.57 59.50 78 E23a_E24a KnownJunction 0 13.41 24.54 68.18 19.24 29.80 42.42 10.11 21.73 22.97 34.14 12.90 12.60 0.00 11.89 14.09 12.56 8.04 47.84 22.02 24.42 16.74 5.20 12.46 79 ER23b ExonRegion 0 44.44 69.42 58.33 36.64 20.57 23.59 23.38 50.24 47.55 54.33 48.62 26.14 26.59 40.10 43.14 38.12 24.48 68.13 38.82 35.21 20.80 19.93 23.67 80 E23_Db NovelBoundary 0 78.16 162.01 46.95 32.23 15.45 55.48 74.63 50.85 32.12 22.62 15.00 48.77 40.58 26.43 27.81 46.74 31.60 27.65 26.54 27.68 26.44 14.57 23.90 81 I23 Intron 0 25.93 29.16 31.28 31.65 22.56 16.58 17.31 28.73 31.93 23.71 18.46 11.02 11.26 14.76 18.68 22.37 10.09 32.25 19.57 27.52 15.29 13.46 18.79 82 I23_AR1 ActiveIntronRegion 0 12.61 24.29 27.24 25.04 21.10 14.12 17.80 35.38 38.42 29.62 18.79 19.05 21.38 17.62 16.15 27.62 11.03 34.81 22.83 34.33 18.16 18.41 16.76 83 I23_SR1 SilentIntronRegion 1 49.47 31.38 29.99 27.93 40.98 10.28 18.72 46.40 46.60 33.10 17.74 29.12 34.03 18.15 20.02 48.66 9.71 59.24 24.98 43.22 15.60 17.69 36.97 84 I23_AR2 ActiveIntronRegion 0 22.81 28.10 30.55 30.96 22.38 16.86 17.59 28.48 31.42 23.34 18.02 11.05 10.39 14.69 17.75 21.82 10.45 30.79 18.74 27.30 15.23 13.00 19.09 85 I23_SR2 SilentIntronRegion 0 57.94 40.89 40.03 41.53 22.79 15.83 14.44 26.04 31.99 23.30 22.40 5.03 11.91 13.71 28.18 21.94 6.37 41.30 24.97 24.66 14.52 14.91 15.01 86 E24_Aa NovelBoundary 0 45.19 2.96 26.31 28.23 8.15 10.73 4.28 20.45 14.73 18.53 23.74 6.30 6.82 9.54 42.52 28.54 0.00 29.14 21.65 17.77 11.74 14.76 21.43 87 ER24a ExonRegion 0 35.61 25.27 95.82 50.94 23.01 27.54 16.94 44.38 52.62 50.95 87.16 28.97 33.37 48.77 76.38 50.32 45.85 74.37 36.84 45.12 47.35 43.77 39.71 88 IG7_AR2 ActiveIntergenicRegion 0 13.20 5.25 3.36 2.24 5.89 5.38 7.34 0.95 1.41 2.52 14.88 1.59 7.39 10.03 18.35 10.93 15.74 0.68 4.67 8.59 9.70 8.41 10.86 89 IG7_AR1 ActiveIntergenicRegion 0 50.35 0.14 23.37 2.44 12.01 0.25 3.33 14.86 14.92 0.95 0.27 0.49 1.07 0.19 0.73 0.00 0.23 0.00 0.00 0.00 0.52 0.29 0.56