Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC35E1 Gene 0 64.52 100.44 97.88 108.12 64.85 47.50 61.92 73.89 73.97 124.90 111.87 95.39 118.44 117.02 124.59 108.00 109.55 118.08 85.48 92.29 107.10 93.47 96.43 2 355538 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 248069 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 409648 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 436494 Transcript 0 88.89 86.77 88.05 97.95 69.36 45.41 59.42 65.72 52.99 94.11 76.76 77.12 102.02 77.03 115.82 69.40 69.01 82.32 69.92 66.66 58.91 73.38 60.15 6 436553 Transcript 0 0.00 0.00 9.88 3.76 0.00 0.00 0.00 0.00 3.10 4.62 0.00 5.55 20.13 0.00 4.45 8.12 3.93 0.00 11.29 0.00 9.02 5.69 3.33 7 488894 Transcript 0 15.49 20.50 12.80 7.45 12.94 9.75 19.30 8.84 12.69 9.33 9.37 15.50 24.10 13.69 33.66 24.27 21.83 22.13 19.97 22.02 9.67 7.50 18.27 8 431408 Transcript 0 0.00 0.00 0.73 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 1.72 2.75 0.61 1.44 0.35 0.71 0.00 0.00 0.00 9 470077 Transcript 0 5.09 6.50 11.04 11.20 6.42 1.89 4.35 9.29 7.43 10.11 7.74 6.76 9.07 6.80 16.47 17.12 11.44 27.18 11.08 15.28 8.21 8.35 11.81 10 421082 Transcript 0 3.04 5.83 10.17 4.62 6.41 1.76 1.42 3.39 3.43 6.75 3.25 3.11 3.28 6.16 6.31 20.43 7.90 10.90 4.22 3.56 3.96 2.49 6.33 11 469055 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 ER1a ExonRegion 0 2.22 0.00 0.70 0.52 0.00 0.00 1.06 1.23 2.30 6.11 11.70 5.26 14.55 1.56 2.61 8.58 13.29 4.61 2.06 1.70 14.87 0.00 10.33 13 E1_Ab KnownBoundary 0 3.56 0.00 6.74 3.83 0.00 0.00 1.72 4.56 12.73 16.06 7.16 0.00 26.78 2.35 4.45 4.36 3.93 17.29 3.76 11.31 13.96 0.00 7.17 14 ER1b ExonRegion 0 0.74 4.05 6.40 2.87 0.59 3.01 0.54 12.17 14.72 24.94 29.52 14.67 18.71 15.13 17.65 17.30 31.38 40.63 9.96 19.31 73.16 8.27 20.00 15 E1_Ac KnownBoundary 0 3.26 6.64 4.46 1.66 4.33 5.79 0.00 20.09 13.89 31.97 67.23 25.81 20.29 33.67 48.83 39.99 78.17 77.64 48.28 41.61 124.36 16.72 50.88 16 ER1c ExonRegion 0 2.12 6.59 6.35 2.60 3.49 2.95 4.69 25.87 19.80 46.19 53.71 39.10 38.80 44.59 38.33 55.66 63.22 110.64 42.95 46.55 88.82 12.25 87.65 17 E1_Ad KnownBoundary 0 0.00 11.71 7.30 6.23 3.48 0.00 8.83 29.45 22.45 47.12 38.85 36.91 52.59 59.39 41.54 80.41 49.65 92.07 29.55 46.21 48.68 13.29 108.84 18 ER1d ExonRegion 0 5.06 11.96 34.86 21.35 11.83 14.32 10.34 44.11 42.43 99.96 96.75 49.51 83.55 97.60 89.15 80.07 66.91 130.35 46.33 90.05 118.72 47.43 82.96 19 E1a_E2a KnownJunction 0 17.63 37.89 70.84 52.51 40.92 15.67 26.19 95.83 78.30 194.40 233.64 128.59 107.30 148.80 154.40 140.05 135.20 260.70 161.23 186.96 182.24 113.28 101.75 20 ER2a ExonRegion 0 19.50 37.06 85.24 86.19 28.57 26.47 20.03 103.22 101.52 223.42 205.21 153.85 204.78 221.43 158.06 193.23 163.88 314.22 132.30 191.82 221.98 132.67 160.07 21 E2a_E3a KnownJunction 0 30.38 45.78 109.43 137.98 39.47 61.10 26.06 111.93 136.08 271.65 292.39 129.49 304.85 289.31 255.27 234.47 197.19 400.56 157.37 256.56 319.27 219.15 340.26 22 E2a_E4a KnownJunction 0 0.00 0.00 9.88 3.76 0.00 0.00 0.00 0.00 3.10 4.62 0.00 5.55 20.13 0.00 4.45 8.12 3.93 0.00 11.29 0.00 9.02 5.69 3.33 23 ER3a ExonRegion 0 20.57 46.77 102.75 95.78 32.61 43.31 42.82 96.79 104.17 226.86 213.18 148.65 248.54 206.00 186.46 162.99 183.94 231.60 131.55 166.93 249.24 125.95 167.86 24 E3a_E4a KnownJunction 0 46.75 68.80 150.85 162.88 54.67 65.64 70.75 124.25 131.51 324.90 309.29 369.72 320.76 344.81 252.55 326.75 253.48 296.18 241.32 207.35 364.86 203.23 260.27 25 ER4a ExonRegion 0 21.86 47.02 128.76 147.84 29.35 37.58 35.55 115.47 136.32 257.81 221.48 176.34 266.42 230.41 176.89 255.91 214.41 283.26 183.42 173.48 273.42 195.20 202.54 26 E4_Ab KnownBoundary 0 18.37 27.03 90.06 133.82 40.07 44.41 31.80 105.89 143.81 202.08 171.10 159.20 209.56 181.24 191.98 202.17 195.23 270.03 177.04 133.14 202.69 125.90 184.13 27 ER4b ExonRegion 0 20.20 25.33 92.65 94.80 22.40 33.97 42.59 83.64 108.92 172.87 157.94 135.90 188.87 158.70 142.95 152.13 156.48 195.83 118.51 127.12 191.24 97.04 100.94 28 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E4a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 0.00 2.76 0.00 30 E4a_E7c KnownJunction 0 26.67 36.24 117.44 111.17 7.13 59.97 64.39 104.49 103.27 191.71 205.05 105.63 198.53 168.82 109.90 144.92 192.71 213.73 94.97 148.29 254.77 116.47 92.62 31 ER4c ExonRegion 0 6.10 20.14 32.73 15.25 8.09 5.28 10.31 5.72 14.35 10.10 22.78 7.11 8.38 4.95 20.24 32.27 15.33 19.84 20.93 23.15 9.60 2.88 11.12 32 E4_Db KnownBoundary 0 11.19 49.20 33.62 9.42 26.57 14.20 16.91 5.01 6.51 7.55 33.90 24.76 26.95 7.83 17.80 40.33 21.97 22.63 26.92 32.73 11.24 6.25 21.26 33 ER4d ExonRegion 1 15.49 20.50 12.80 7.45 12.94 9.75 19.30 8.84 12.69 9.33 9.37 15.50 24.10 13.69 33.66 24.27 21.83 22.13 19.97 22.02 9.67 7.50 18.27 34 E4_Dc NovelBoundary 0 53.19 12.43 2.99 6.09 32.09 32.82 40.63 5.75 5.87 9.54 2.05 7.20 6.66 0.00 37.33 32.30 13.65 12.15 24.00 14.19 10.93 8.63 14.51 35 ER5a ExonRegion 0 0.00 0.00 0.73 0.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 1.72 2.75 0.61 1.44 0.35 0.71 0.00 0.00 0.00 36 Ix Intron 0 18.73 11.13 10.74 12.97 11.11 3.76 11.30 9.16 8.48 8.42 9.35 12.88 11.76 6.20 17.54 17.08 15.96 16.35 16.13 13.20 6.74 4.66 8.71 37 Ix_SR1 SilentIntronRegion 0 19.16 11.68 11.46 13.84 11.72 4.02 11.80 9.78 9.05 8.98 9.50 13.22 11.98 6.61 17.81 17.79 16.55 17.44 17.05 13.67 6.97 4.77 8.57 38 E6_Aa NovelBoundary 0 6.67 14.73 20.55 11.85 16.04 10.16 21.64 18.94 9.49 15.42 11.53 19.81 19.80 0.00 14.59 40.33 14.31 28.11 0.00 15.34 5.75 5.63 15.19 39 ER6a ExonRegion 0 6.08 11.67 16.94 9.24 12.81 3.51 2.84 6.78 5.07 13.49 6.51 6.22 6.56 7.37 12.63 24.71 15.81 21.79 8.43 7.12 7.93 4.99 12.66 40 E6a_E7c KnownJunction 0 0.00 0.00 3.40 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 4.94 0.00 16.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E7_Aa NovelBoundary 0 13.04 18.35 30.96 25.70 20.03 11.58 5.92 27.36 12.21 39.14 18.90 5.40 0.00 20.31 55.38 18.71 17.02 60.36 18.07 26.08 5.81 20.76 40.89 42 ER7a ExonRegion 1 10.18 13.00 22.08 22.40 12.84 3.77 8.70 18.57 14.86 17.07 15.49 13.51 18.13 13.60 32.94 34.24 22.89 51.78 22.16 30.57 16.43 13.95 23.63 43 E7_Ab KnownBoundary 0 12.82 8.35 12.21 20.38 15.87 10.39 5.79 20.78 20.08 20.36 16.53 6.30 12.50 12.89 41.29 28.54 35.90 43.07 31.53 20.65 25.39 5.33 8.11 44 ER7b ExonRegion 1 32.60 15.89 30.71 22.67 8.05 8.23 9.38 17.48 25.28 23.80 20.60 12.46 18.00 11.50 39.49 33.48 39.27 63.37 22.33 32.17 22.49 12.67 17.99 45 E7_Ac KnownBoundary 0 55.34 17.89 28.68 24.37 7.81 4.37 8.48 24.56 32.58 22.24 15.85 5.55 7.14 6.89 25.47 18.80 50.77 50.86 28.61 52.28 11.24 2.69 8.02 46 ER7c ExonRegion 0 50.80 46.09 125.19 109.71 14.72 45.84 57.37 117.53 121.25 200.13 220.03 153.70 245.44 177.57 142.16 147.12 217.31 207.87 133.79 184.04 246.45 94.11 88.59 47 ER7d ExonRegion 0 36.84 72.14 139.34 118.93 31.54 58.03 47.38 114.08 117.72 228.48 185.19 161.32 298.04 174.59 176.91 125.04 212.36 212.45 121.04 162.06 236.32 110.97 96.98 48 E7_Db KnownBoundary 0 42.53 96.89 188.02 163.12 77.59 96.59 70.17 133.70 126.97 304.64 175.94 166.25 246.57 172.11 157.61 149.53 183.45 227.45 139.86 145.67 251.93 167.84 128.39 49 ER7e ExonRegion 0 27.10 70.08 158.36 125.18 36.28 79.16 62.21 116.24 141.10 249.06 205.41 200.74 344.01 237.71 212.91 249.42 197.80 314.63 182.05 186.17 234.54 160.30 187.44 50 E7c_E8a KnownJunction 0 40.60 57.82 187.57 155.36 81.58 56.05 91.20 128.07 172.91 335.05 260.86 199.11 242.52 259.64 188.89 187.39 205.33 329.10 163.49 190.73 294.93 135.02 210.25 51 ER8a ExonRegion 0 39.52 53.51 151.73 126.06 39.48 52.64 50.53 117.11 134.71 261.74 189.33 154.94 306.85 223.81 203.80 221.79 185.88 267.80 156.50 155.53 273.48 142.91 191.94 52 E8_Da KnownBoundary 1 40.97 49.86 105.94 92.20 16.30 38.84 49.46 98.95 99.45 166.52 85.81 165.20 311.67 176.23 224.49 227.21 121.55 201.55 135.82 102.52 186.20 129.08 190.79 53 ER8b ExonRegion 1 36.58 41.18 97.65 89.27 10.03 44.18 49.77 100.68 119.92 199.27 126.54 132.32 292.25 201.44 238.81 232.29 179.07 231.89 157.48 109.77 190.28 156.72 223.00 54 E8_Db KnownBoundary 0 51.64 33.88 64.66 74.28 15.28 63.09 52.69 69.91 103.41 145.48 166.15 131.89 304.20 228.09 207.31 244.55 198.78 244.41 196.90 126.49 183.42 143.78 246.36 55 ER8c ExonRegion 0 86.74 165.83 150.89 174.89 96.41 72.97 96.42 98.47 111.04 177.98 172.00 134.84 159.04 181.11 172.15 161.92 165.04 170.18 124.91 135.32 169.33 139.58 143.83 56 E8_Dc KnownBoundary 0 534.02 403.61 118.98 151.26 345.25 226.12 393.09 157.93 113.16 113.14 82.71 78.18 42.37 82.11 112.49 224.13 277.70 168.43 180.90 265.90 127.20 139.80 234.07 57 ER8d ExonRegion 0 151.82 227.36 183.24 222.84 155.67 93.46 127.36 162.46 132.00 234.76 194.29 181.81 171.93 201.01 216.14 162.12 189.28 137.69 135.23 137.95 141.76 192.00 165.62 58 E8_Dd KnownBoundary 1 98.02 164.84 86.25 113.04 59.51 76.89 55.69 85.02 61.31 125.55 82.13 114.49 274.01 95.30 103.10 70.67 57.04 58.45 59.58 63.02 30.09 84.75 41.15 59 ER8e ExonRegion 0 88.89 86.77 88.05 97.95 69.36 45.41 59.42 65.72 52.99 94.11 76.76 77.12 102.02 77.03 115.82 69.40 69.01 82.32 69.92 66.66 58.91 73.38 60.15