Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GIPC1 Gene 0 42.52 27.91 206.94 78.44 33.06 37.27 39.11 88.66 65.20 99.35 118.68 9.77 12.03 54.22 96.05 43.55 35.81 139.81 142.44 79.98 244.14 95.92 107.91 2 345425 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 393028 Transcript 0 0.00 0.00 5.32 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 351277 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 393033 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 393031 Transcript 0 2.12 2.03 34.31 9.99 0.89 1.83 3.09 9.22 7.41 12.62 20.62 1.44 4.69 7.04 14.51 6.93 6.60 19.71 37.16 14.89 63.91 12.50 21.54 7 393029 Transcript 0 10.58 8.13 103.34 47.25 8.03 6.72 11.92 34.57 24.29 35.94 45.75 2.89 3.13 21.11 42.55 14.86 12.10 58.51 65.83 48.23 102.84 44.45 46.01 8 IG50 Intergenic 0 0.51 0.56 81.08 0.61 0.65 0.19 0.51 1.29 2.24 0.71 0.20 0.50 0.15 0.04 0.32 0.08 0.26 0.51 1.48 0.57 0.82 0.41 1.97 9 IG50_AR2 ActiveIntergenicRegion 0 1.78 2.20 226.73 2.06 2.57 0.36 2.81 4.73 5.30 2.08 1.18 1.84 0.24 0.22 1.97 0.26 0.86 2.25 5.40 1.33 5.37 0.50 8.21 10 IG50_SR1 SilentIntergenicRegion 0 0.37 0.38 65.24 0.46 0.44 0.17 0.26 0.91 1.91 0.56 0.09 0.35 0.14 0.03 0.14 0.06 0.19 0.32 1.06 0.49 0.32 0.40 1.29 11 ER1a ExonRegion 0 2.12 0.68 0.68 0.00 0.30 2.45 0.00 0.00 0.00 1.02 0.00 0.00 0.00 1.08 2.90 0.00 6.24 0.00 3.54 0.71 2.20 0.23 6.53 12 ER1b ExonRegion 0 3.65 7.67 2.48 0.67 7.54 4.53 0.29 0.44 0.26 2.21 2.02 0.00 0.11 13.61 29.98 4.71 7.36 3.31 14.39 5.18 37.92 9.00 11.34 13 E1a_E2a KnownJunction 0 0.00 3.29 4.52 6.23 7.89 2.33 1.99 0.00 1.30 5.45 12.00 0.00 0.00 2.47 15.08 7.95 3.55 3.69 9.60 3.26 13.28 14.08 7.85 14 E1a_E3a NovelJunction 0 0.00 0.00 17.42 0.00 0.00 2.16 5.48 14.29 0.00 2.15 2.00 0.00 0.00 2.30 5.07 0.00 0.00 3.36 8.94 0.00 10.26 0.00 7.77 15 E1a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E5b KnownJunction 0 0.00 0.00 5.32 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2a ExonRegion 0 1.93 2.54 25.40 10.90 17.49 6.09 4.54 15.96 10.74 15.97 31.48 5.33 1.84 10.93 15.54 3.77 12.50 22.87 52.84 14.51 65.40 22.44 29.94 18 E2a_E3a KnownJunction 1 0.00 2.89 42.64 11.39 0.00 0.00 0.00 23.78 21.01 21.03 28.64 6.30 18.83 12.60 23.98 0.00 29.17 28.48 0.00 3.07 45.47 8.57 0.00 19 ER3a ExonRegion 0 8.51 6.03 98.59 17.01 3.10 10.84 9.21 31.86 29.87 31.87 39.91 2.51 7.14 25.99 31.42 12.26 23.67 51.17 58.71 33.41 137.66 32.37 29.20 20 E3_Da NovelBoundary 0 3.33 0.00 19.37 16.02 0.00 6.76 0.00 9.16 17.30 6.21 2.53 0.00 0.00 2.47 8.90 4.27 7.67 64.29 26.54 17.13 10.93 6.18 35.85 21 E3a_E4b KnownJunction 0 0.00 0.00 119.98 26.34 4.33 5.39 8.04 25.06 25.58 42.09 68.33 0.00 12.17 15.95 41.54 27.51 26.37 54.06 143.35 43.02 171.25 42.13 47.80 22 E3a_E5b NovelJunction 0 0.00 0.00 36.69 20.14 7.47 2.50 4.28 17.50 14.84 29.63 18.16 0.00 0.00 2.12 4.45 8.03 3.46 20.69 22.49 2.88 89.82 18.61 11.95 23 I3_SR1 SilentIntronRegion 0 23.82 11.81 12.59 6.63 13.60 11.32 8.65 8.88 8.35 6.51 8.07 9.01 3.66 3.92 4.45 3.78 3.00 17.18 16.77 25.09 18.00 10.21 23.45 24 ER4a ExonRegion 0 2.12 2.03 34.31 9.99 0.89 1.83 3.09 9.22 7.41 12.62 20.62 1.44 4.69 7.04 14.51 6.93 6.60 19.71 37.16 14.89 63.91 12.50 21.54 25 ER4b ExonRegion 0 13.67 15.13 118.39 42.86 15.14 21.90 18.58 41.39 32.13 52.65 72.49 6.06 6.89 31.72 63.45 20.45 21.10 76.34 87.78 52.01 165.35 67.61 63.68 26 E4a_E5b KnownJunction 0 42.08 35.85 325.68 144.27 33.02 16.58 50.83 105.19 84.81 113.22 107.50 12.45 6.49 50.97 131.16 46.23 40.39 186.13 208.48 133.20 278.37 118.61 134.45 27 ER5a ExonRegion 0 10.58 8.13 103.34 47.25 8.03 6.72 11.92 34.57 24.29 35.94 45.75 2.89 3.13 21.11 42.55 14.86 12.10 58.51 65.83 48.23 102.84 44.45 46.01 28 ER5b ExonRegion 0 47.91 32.38 364.33 143.66 38.23 52.91 50.66 118.30 103.60 134.80 172.43 15.00 20.18 71.70 122.73 49.29 46.69 239.50 174.63 143.15 403.61 131.84 146.23 29 E5a_E6a KnownJunction 0 62.97 49.46 405.25 188.79 95.25 82.79 59.35 121.83 108.65 134.52 141.25 5.40 32.63 52.45 166.51 51.10 70.03 293.74 295.54 152.19 384.50 180.21 187.54 30 ER6a ExonRegion 0 41.51 31.94 292.18 92.23 39.69 47.81 59.04 109.69 95.71 117.08 152.94 11.84 25.26 75.98 110.55 47.34 55.62 213.75 155.80 117.59 328.96 117.69 128.56 31 E6a_E7a KnownJunction 0 39.71 33.55 337.92 128.22 33.53 82.85 86.25 130.82 97.22 131.65 175.68 35.56 19.48 56.68 110.88 41.61 73.68 252.66 202.45 140.17 421.01 125.96 111.65 32 ER7a ExonRegion 0 36.67 31.39 258.91 82.69 30.17 52.51 54.25 106.37 70.17 99.48 143.31 16.78 16.73 65.53 113.15 44.53 38.35 155.64 152.81 94.28 306.08 106.68 114.84 33 E7a_E8a KnownJunction 1 75.35 46.11 335.32 100.19 56.20 59.40 89.47 148.24 78.65 108.84 215.48 17.86 33.28 79.11 92.22 104.25 32.91 218.50 203.02 92.62 362.32 87.63 115.67 34 ER8a ExonRegion 0 59.47 44.49 319.07 105.08 60.95 44.21 74.19 143.46 94.22 132.75 187.66 14.68 20.70 81.09 118.46 75.86 48.39 228.63 239.14 113.21 353.99 102.63 146.29 35 E8a_E9a KnownJunction 0 141.06 30.92 354.01 121.63 41.00 46.28 72.60 152.18 112.04 128.67 127.93 13.05 19.97 51.03 128.56 26.15 26.55 215.60 156.24 91.40 294.68 116.53 122.58 36 ER9a ExonRegion 0 63.50 35.72 218.15 92.29 42.76 43.84 44.99 110.15 74.81 127.73 135.86 10.42 10.42 61.36 116.38 58.24 39.65 149.21 174.03 81.80 250.42 114.96 133.38 37 ER9b ExonRegion 0 1.06 0.00 0.61 0.00 0.00 0.00 0.66 0.00 0.62 1.72 0.00 0.00 0.00 1.62 1.45 0.00 0.00 1.85 0.00 1.06 1.10 0.00 0.00