Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRMT1 Gene 0 161.46 69.30 313.56 130.79 69.62 71.14 46.41 106.15 58.99 121.74 188.10 30.58 35.13 169.67 231.26 162.69 129.83 102.36 152.95 111.74 132.21 87.27 83.32 2 357720 Transcript 1 305.31 97.70 102.90 41.13 80.27 129.98 84.38 30.12 20.55 59.13 82.39 9.17 0.00 51.34 95.66 122.96 74.67 35.86 134.24 52.17 72.03 50.32 82.80 3 437766 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 221504 Transcript 0 11.26 34.66 59.52 67.66 36.08 18.06 27.91 8.13 5.12 13.81 6.95 0.00 0.00 14.77 24.97 7.09 8.42 42.32 47.25 73.50 0.00 8.21 0.00 5 IG13 Intergenic 0 3.90 0.49 0.45 1.25 0.66 0.68 0.16 0.00 0.90 0.63 7.60 3.51 1.83 10.32 16.63 10.59 6.90 1.02 2.74 2.09 4.87 1.54 2.17 6 IG13_SR2 SilentIntergenicRegion 0 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.75 0.00 0.93 12.26 17.55 10.83 11.10 0.00 2.68 1.19 4.31 0.58 1.65 7 IG13_AR1 ActiveIntergenicRegion 0 7.16 0.96 0.88 2.45 1.29 1.33 0.32 0.00 1.78 1.24 6.54 6.89 2.80 9.73 17.57 11.49 3.99 2.00 3.08 3.09 5.86 2.52 2.84 8 ER1a ExonRegion 1 525.73 168.37 109.15 41.87 160.54 248.43 154.73 41.22 29.24 70.13 132.35 5.89 0.00 98.32 146.32 231.64 130.91 61.36 212.20 96.67 116.50 92.56 151.01 9 E1a_E2b KnownJunction 1 84.90 27.03 96.66 40.39 0.00 11.53 14.04 19.02 11.86 48.14 32.43 12.45 0.00 4.36 45.00 14.27 18.42 10.36 56.28 7.67 27.55 8.08 14.60 10 ER2a ExonRegion 0 4.63 5.06 14.42 2.93 0.88 0.52 1.31 3.86 0.07 2.74 5.49 0.04 1.05 5.20 9.17 3.88 4.34 5.65 17.08 4.31 6.21 0.33 3.86 11 E2_Ab KnownBoundary 0 0.00 2.89 20.96 8.99 0.00 0.00 1.72 3.86 0.00 3.95 2.42 0.00 0.00 4.71 8.90 0.00 0.00 2.57 16.85 3.13 3.15 0.00 0.00 12 ER2b ExonRegion 0 55.27 45.90 247.53 110.46 84.25 89.98 51.35 93.25 47.34 121.12 165.34 26.11 17.30 137.51 152.68 169.82 127.16 70.14 131.81 118.66 120.44 79.39 88.85 13 E2_Da NovelBoundary 0 16.23 23.88 41.87 15.48 36.16 29.02 41.73 22.43 19.85 22.35 12.37 6.30 0.00 20.95 4.45 14.18 11.41 5.97 22.78 7.48 25.33 10.04 7.43 14 E2a_E3a KnownJunction 0 100.46 147.21 378.34 153.89 127.59 206.30 164.37 156.04 81.28 142.50 236.90 42.91 40.42 174.23 179.62 131.08 130.53 87.55 209.70 143.30 121.45 110.59 61.80 15 E2a_E5a NovelJunction 0 10.59 9.08 40.60 16.15 0.00 15.96 11.84 3.82 1.56 15.58 2.42 0.00 0.00 2.47 4.45 0.00 9.44 6.76 4.80 5.94 3.15 6.00 0.00 16 ER3a ExonRegion 0 174.50 148.02 352.21 156.20 74.49 150.34 84.12 143.52 71.44 147.44 282.89 44.07 32.75 208.82 187.18 127.59 153.96 101.99 165.75 141.34 138.72 114.18 67.91 17 E3a_E4a KnownJunction 0 341.76 145.50 318.76 142.57 51.44 69.16 47.43 112.99 58.68 161.36 247.48 49.82 52.92 233.09 263.55 163.12 129.50 99.94 156.80 144.07 146.78 134.22 84.94 18 ER4a ExonRegion 0 391.75 132.75 464.95 195.52 89.68 85.92 46.44 167.62 87.87 202.11 329.96 68.58 68.35 265.99 292.62 239.29 192.54 133.44 244.34 156.40 208.06 150.09 112.09 19 E4a_E5a KnownJunction 0 304.05 109.52 479.91 180.83 71.56 85.97 45.53 164.21 67.10 176.54 250.54 86.43 65.42 187.83 296.06 152.78 138.38 125.31 153.23 120.10 160.25 103.79 83.23 20 ER5a ExonRegion 0 200.96 96.09 462.15 228.96 89.24 79.16 55.90 165.15 79.81 182.10 251.04 50.20 69.73 237.04 294.91 217.44 171.73 155.34 199.85 158.49 185.84 133.30 99.60 21 E5a_E6a KnownJunction 0 199.37 65.32 527.21 260.51 99.83 74.39 43.50 157.27 63.95 161.17 219.79 30.01 48.21 200.48 243.28 177.56 140.81 157.11 157.37 159.09 173.97 102.63 80.16 22 ER6a ExonRegion 0 146.20 74.93 382.47 169.75 81.79 92.64 52.74 123.66 59.73 127.12 176.14 34.93 67.88 212.26 247.21 159.62 131.75 131.91 161.68 143.03 152.07 111.54 82.99 23 E6a_E7a KnownJunction 1 139.80 68.67 375.18 154.96 67.91 70.36 44.69 132.63 61.75 130.84 134.24 11.40 66.07 170.70 226.47 141.50 114.63 91.57 122.54 171.49 135.79 109.49 85.19 24 ER7a ExonRegion 0 116.22 62.79 334.80 125.51 53.07 56.36 39.52 101.58 45.22 117.21 147.65 30.38 53.87 148.38 217.34 112.55 116.96 68.12 91.56 133.85 114.28 72.57 53.61 25 E7a_E8a KnownJunction 0 226.34 76.17 437.24 199.97 55.35 59.74 43.41 125.11 70.95 141.05 151.88 25.21 34.90 164.34 201.00 116.55 121.55 85.85 106.07 138.38 99.71 82.60 75.38 26 ER8a ExonRegion 0 183.28 88.99 416.04 156.94 64.74 75.03 43.03 128.74 68.32 153.05 201.15 26.99 26.82 196.40 269.15 164.98 136.87 123.28 118.91 137.98 134.62 85.24 89.64 27 E8_Da NovelBoundary 0 21.41 8.75 46.33 33.96 7.47 17.43 9.63 18.52 7.78 33.50 4.74 18.61 0.00 24.25 34.12 37.60 17.02 13.93 12.99 31.19 19.09 5.88 11.95 28 E8a_E9a KnownJunction 0 221.59 64.40 357.08 105.78 71.56 94.15 29.85 110.32 69.99 135.41 221.06 18.61 25.49 183.18 254.40 157.39 136.33 99.03 124.90 59.76 144.81 115.92 60.78 29 E8a_E10a KnownJunction 0 11.26 34.66 59.52 67.66 36.08 18.06 27.91 8.13 5.12 13.81 6.95 0.00 0.00 14.77 24.97 7.09 8.42 42.32 47.25 73.50 0.00 8.21 0.00 30 ER9a ExonRegion 0 173.07 55.98 325.15 101.67 43.73 68.88 30.54 98.06 67.18 127.11 196.49 24.24 41.94 187.67 229.67 160.53 122.25 98.06 108.19 70.82 153.17 80.51 68.39 31 E9_Da NovelBoundary 0 24.15 15.59 72.56 32.90 29.63 4.88 19.03 12.16 14.50 27.13 25.27 0.00 0.00 26.90 42.15 24.18 21.51 27.65 9.04 34.90 5.75 5.45 10.50 32 E9a_E10a KnownJunction 1 227.00 43.61 281.10 86.74 54.67 73.59 30.12 78.16 66.32 114.81 181.31 6.00 33.93 213.67 276.41 170.98 124.54 95.09 74.54 41.74 173.97 88.60 88.44 33 E10_Aa NovelBoundary 0 6.96 16.77 69.45 45.25 30.90 12.49 10.47 28.96 12.59 23.26 11.11 12.15 0.00 26.66 37.46 29.14 18.23 39.09 26.35 24.54 16.87 2.33 24.50 34 ER10a ExonRegion 0 205.94 83.41 416.92 162.92 65.29 59.86 57.67 112.62 84.71 134.89 202.76 22.70 41.41 239.33 349.19 229.62 139.16 175.30 215.24 119.82 164.84 101.38 117.17 35 E10_Da NovelBoundary 0 6.67 2.63 25.69 5.86 0.00 4.60 4.50 10.06 4.69 17.84 9.58 13.95 6.82 36.14 20.03 12.30 7.95 7.92 4.80 3.00 2.90 0.00 7.85 36 E10a_E11a KnownJunction 0 259.68 84.06 573.19 218.05 86.25 70.02 59.44 147.83 111.34 179.20 242.06 31.51 19.80 241.39 394.59 261.90 171.86 200.63 266.45 134.48 192.75 137.41 125.23 37 ER11a ExonRegion 0 158.91 62.95 501.19 184.94 72.48 73.53 47.09 140.27 84.72 159.31 221.80 25.27 28.52 218.79 301.82 192.09 144.11 148.67 178.03 145.18 179.51 101.29 99.41 38 E11a_E12a KnownJunction 0 225.52 126.23 559.74 263.30 111.80 75.75 75.56 164.05 97.51 179.52 278.02 25.51 63.15 282.77 427.47 264.72 214.59 158.68 322.55 171.75 237.72 91.61 127.79 39 ER12a ExonRegion 0 192.23 76.61 526.18 222.20 83.10 66.25 53.91 147.68 82.31 164.21 263.17 29.85 33.59 215.12 401.69 266.18 141.82 209.61 240.12 162.77 184.09 116.19 130.07 40 E12a_E13a KnownJunction 0 212.85 91.30 468.26 212.49 104.24 89.21 42.09 149.26 100.90 152.76 242.80 69.47 39.93 189.83 376.17 209.69 90.79 161.83 160.57 172.96 138.20 111.69 101.67 41 I12_SR1 SilentIntronRegion 1 6.29 2.01 3.62 2.01 0.00 0.00 0.66 2.55 0.91 2.54 3.81 0.00 1.91 5.25 3.92 35.32 4.90 0.91 14.19 3.16 2.18 9.28 14.54 42 ER13a ExonRegion 0 199.50 77.20 458.40 171.67 79.17 66.25 56.77 167.58 89.55 166.53 273.35 46.51 37.52 230.70 352.68 211.16 166.01 153.99 204.80 155.10 183.29 90.93 99.23 43 E13a_E14a KnownJunction 0 248.19 82.95 464.56 232.34 109.34 111.81 44.43 218.02 108.97 167.32 240.96 84.78 46.75 241.45 429.32 195.16 148.20 165.44 202.17 162.73 157.72 81.01 124.54 44 ER14a ExonRegion 0 231.80 101.65 404.12 170.17 87.01 80.54 58.99 143.48 88.91 158.15 267.69 49.09 51.89 244.84 326.22 199.63 133.36 158.55 174.82 137.33 144.96 90.21 95.12 45 E14a_E15a KnownJunction 0 297.24 82.35 429.73 178.37 117.15 91.48 110.76 132.18 93.14 195.72 219.85 48.32 55.84 202.90 258.11 203.19 119.40 166.64 222.88 160.11 138.63 96.08 75.46 46 ER15a ExonRegion 0 125.56 35.96 299.88 118.08 77.80 52.65 47.36 114.42 73.22 127.03 191.71 41.92 35.72 193.92 284.83 152.69 144.69 108.08 119.82 110.83 113.49 75.23 77.87 47 E15_Da NovelBoundary 0 46.23 20.72 105.38 59.90 24.36 16.64 30.69 52.82 31.89 48.03 63.12 30.76 12.99 121.26 112.74 64.00 70.31 46.01 20.89 58.23 49.11 20.51 43.19 48 E15a_E16a KnownJunction 0 14.00 14.14 193.31 84.17 40.15 21.98 15.99 38.12 44.76 61.81 78.97 46.52 34.90 90.24 162.56 121.34 60.59 92.48 116.14 54.52 51.65 63.07 55.23 49 I15 Intron 0 32.38 8.07 15.52 6.91 19.71 20.78 18.76 11.68 3.13 7.75 35.05 11.83 8.75 73.63 78.72 33.68 22.45 7.29 23.47 22.91 22.48 16.53 34.95 50 I15_AR1 ActiveIntronRegion 0 33.09 8.25 15.85 7.05 20.16 21.26 19.17 11.92 3.20 7.91 35.82 12.10 8.95 75.24 80.31 34.45 22.96 7.45 23.96 23.43 22.99 16.88 35.67 51 E16_Aa NovelBoundary 0 76.90 15.39 199.96 102.62 43.46 28.68 23.98 74.75 51.91 94.58 69.65 23.86 26.46 93.00 230.55 121.59 73.21 77.52 71.44 44.68 61.10 29.70 93.64 52 ER16a ExonRegion 0 39.97 41.06 193.12 95.96 38.92 23.19 18.50 81.48 51.77 93.57 198.15 20.32 26.01 165.49 301.60 128.01 170.86 55.86 173.72 78.22 131.85 84.62 79.22 53 E16a_E17a KnownJunction 0 85.42 54.27 229.71 102.85 48.05 43.44 12.59 94.47 71.38 101.03 135.24 11.40 26.46 180.29 257.99 130.56 150.91 68.19 166.59 67.94 109.35 155.23 62.14 54 ER17a ExonRegion 0 138.86 38.66 143.65 70.48 58.82 31.01 23.49 51.90 37.01 51.83 124.44 26.24 33.56 87.29 157.12 121.99 106.67 60.54 158.61 45.05 84.11 71.43 64.97 55 IG12_AR1 ActiveIntergenicRegion 0 2.15 0.00 0.00 0.00 1.87 0.00 0.47 0.90 0.00 0.00 14.62 0.00 0.67 6.07 13.99 13.38 7.81 0.00 0.00 0.42 0.00 0.00 0.51