Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOOK2 Gene 0 26.90 30.98 115.17 59.84 17.68 30.59 15.99 47.82 51.72 51.60 11.39 4.09 8.40 30.96 36.53 26.47 18.64 62.81 53.08 54.15 51.04 22.34 37.32 2 397668 Transcript 0 10.71 13.70 77.47 33.78 12.07 20.91 9.74 29.80 27.60 31.38 2.04 0.00 0.00 3.25 0.16 4.89 0.18 44.51 34.20 38.53 2.82 1.86 0.98 3 264827 Transcript 0 17.11 2.70 6.89 0.00 7.98 0.00 0.00 7.31 1.79 7.90 14.32 0.00 19.32 40.56 58.84 26.32 25.62 4.77 0.00 2.94 45.22 16.23 25.01 4 421850 Transcript 0 11.25 9.87 34.96 16.60 9.09 10.03 4.06 9.95 14.52 15.87 2.88 1.16 2.50 6.52 7.56 6.81 2.53 13.49 5.68 7.32 16.52 5.64 9.34 5 IG46_AR2 ActiveIntergenicRegion 0 36.81 16.37 6.65 5.38 8.65 2.67 7.45 5.97 7.69 7.60 3.79 0.00 0.00 3.50 10.47 14.78 11.70 12.33 13.96 16.40 7.24 6.71 14.02 6 ER1a ExonRegion 0 29.46 17.15 19.71 9.62 7.59 22.22 5.95 14.30 9.47 11.14 2.60 0.00 1.82 2.98 7.05 11.02 6.04 26.23 24.08 16.17 23.33 6.94 20.43 7 E1a_E2a KnownJunction 0 9.48 11.58 26.97 15.08 0.00 13.51 0.00 23.70 14.76 19.26 6.69 0.00 0.00 4.71 4.45 7.95 12.25 15.63 22.97 13.17 55.78 5.33 7.85 8 E2_Aa NovelBoundary 0 0.00 9.01 16.65 9.22 0.00 9.77 4.28 7.72 4.98 7.60 0.00 0.00 0.00 0.00 4.45 0.00 0.00 15.50 9.13 26.53 10.63 0.00 3.59 9 ER2a ExonRegion 1 8.96 19.93 75.18 40.22 7.72 17.76 5.79 39.85 38.95 36.77 20.83 0.00 0.44 9.52 38.80 34.18 29.71 49.14 76.37 59.75 81.84 23.11 45.38 10 E2_Da NovelBoundary 0 0.00 15.13 22.53 5.36 7.64 8.40 13.47 15.20 3.12 14.64 0.00 0.00 0.00 2.47 19.66 3.25 9.44 23.46 12.42 18.86 8.28 2.69 4.27 11 E2a_E3a KnownJunction 1 10.74 23.55 118.45 61.16 3.31 14.54 3.49 76.48 71.73 49.05 14.00 0.00 12.17 11.65 43.64 84.34 16.08 83.24 105.51 89.16 56.84 58.48 108.67 12 E3_Aa NovelBoundary 0 0.00 6.45 20.11 4.63 6.45 16.13 5.30 9.41 12.56 14.37 2.68 0.00 6.49 7.30 15.33 4.36 3.93 35.53 36.52 24.22 2.59 0.00 11.27 13 ER3a ExonRegion 1 13.25 21.26 79.62 38.38 14.30 16.18 11.05 56.14 44.85 37.58 9.74 7.24 2.18 27.43 43.88 50.20 12.30 94.67 77.71 71.29 56.27 28.91 70.12 14 E3_Da NovelBoundary 1 16.82 12.23 168.53 96.92 27.50 28.62 25.35 72.08 66.06 63.61 8.00 6.30 14.28 26.61 78.74 34.78 23.84 162.75 107.11 119.46 55.66 30.68 93.05 15 E3a_E4a KnownJunction 0 0.00 21.84 41.63 18.58 12.31 15.79 5.83 18.20 23.21 17.38 6.37 0.00 0.00 14.30 10.26 14.87 4.30 38.88 44.33 20.77 25.45 20.39 15.71 16 I3 Intron 0 32.81 30.84 45.04 30.46 24.53 28.12 14.34 20.18 25.15 25.92 8.05 6.79 13.47 22.29 24.09 24.77 14.85 35.97 65.83 38.65 37.08 15.63 31.81 17 I3_AR1 ActiveIntronRegion 0 4.32 16.59 42.47 28.99 14.19 29.16 7.02 27.34 28.52 24.41 11.04 7.27 10.77 20.02 29.22 31.53 10.77 37.44 80.58 45.99 47.65 19.54 22.74 18 I3_AR2 ActiveIntronRegion 0 53.07 41.14 47.33 31.83 32.02 27.69 19.62 15.40 23.07 27.27 6.06 6.53 15.48 24.11 20.75 20.32 17.87 35.32 56.27 33.95 30.11 13.06 38.47 19 E4_Aa NovelBoundary 0 51.19 35.72 131.54 68.29 19.61 9.77 21.51 76.73 58.51 55.82 7.05 44.41 19.80 54.56 34.74 33.32 26.46 54.80 84.52 55.74 33.98 36.68 62.14 20 ER4a ExonRegion 0 34.78 35.25 99.45 69.67 43.91 41.93 23.68 46.91 52.33 42.26 16.07 12.39 8.92 29.84 39.37 34.62 28.03 77.53 85.19 67.88 55.01 35.09 56.31 21 E4a_E5a KnownJunction 0 49.64 39.53 175.25 128.92 71.82 79.33 44.83 66.54 98.23 84.56 17.00 12.60 12.82 25.78 35.60 32.90 47.87 136.88 99.67 120.87 105.76 36.99 71.88 22 ER5a ExonRegion 0 36.11 63.84 177.93 102.25 40.44 63.59 37.49 84.97 88.72 90.95 24.50 5.37 27.58 54.79 49.63 57.14 34.85 116.52 93.12 100.05 93.47 49.25 68.65 23 E5a_E6a KnownJunction 0 67.79 93.54 232.99 115.30 18.42 29.81 20.67 94.96 92.71 106.62 19.43 0.00 19.48 90.06 43.27 41.70 46.94 89.37 77.08 125.66 112.25 49.72 72.47 24 E6_Aa NovelBoundary 0 13.63 5.99 13.63 13.45 15.03 9.71 2.21 16.02 10.94 10.42 0.00 0.00 0.00 2.12 11.99 3.42 7.95 8.21 22.21 5.37 0.00 0.00 8.11 25 ER6a ExonRegion 0 69.53 65.52 219.94 111.72 29.67 48.95 26.83 94.28 103.24 106.88 36.70 12.10 26.76 61.98 43.43 43.40 45.63 112.55 103.90 101.75 116.89 38.67 85.34 26 E6a_E7a KnownJunction 0 75.42 81.37 231.22 125.82 31.83 57.81 28.57 108.19 118.84 105.14 28.85 12.30 5.84 57.39 79.86 44.86 31.42 135.06 114.45 99.20 73.08 55.42 99.96 27 ER7a ExonRegion 0 56.71 43.48 204.29 104.31 30.83 44.04 26.67 90.26 94.30 92.08 20.40 5.98 16.08 49.91 46.56 36.80 40.87 97.87 62.24 80.24 56.67 36.25 48.48 28 E7a_E8a KnownJunction 0 77.87 45.98 251.79 122.10 39.47 27.43 37.36 99.15 99.74 96.76 19.58 12.00 0.00 32.55 24.11 42.98 28.80 63.34 39.91 90.19 66.47 27.62 40.04 29 ER8a ExonRegion 0 58.87 55.68 202.22 90.79 31.91 55.96 31.53 78.16 98.73 94.94 13.63 9.83 14.30 52.15 57.24 41.06 46.21 88.65 60.36 84.76 76.80 25.16 43.18 30 E8a_E9a KnownJunction 0 51.34 40.45 174.33 100.49 15.79 54.91 32.86 66.05 86.92 72.74 14.21 6.90 19.80 39.32 31.15 47.08 48.25 78.72 70.50 58.10 54.73 43.11 46.95 31 ER9a ExonRegion 0 33.96 35.63 179.53 76.01 23.05 37.61 19.46 63.04 67.90 73.68 11.60 7.66 10.81 46.37 45.99 29.63 28.48 95.37 66.06 68.84 65.86 31.46 55.23 32 E9a_E10a KnownJunction 0 50.08 18.68 176.22 85.87 28.44 47.36 34.27 65.60 75.98 71.51 4.47 5.40 6.33 33.67 14.96 27.86 32.35 81.25 30.31 55.48 63.20 26.82 53.18 33 ER10a ExonRegion 0 22.52 41.15 153.28 67.64 15.90 45.17 24.55 43.06 57.45 61.31 10.24 0.92 10.11 34.42 45.45 19.73 16.79 79.85 61.45 56.50 60.88 20.66 50.32 34 E10a_E11a KnownJunction 0 39.64 54.86 184.06 71.02 7.13 42.70 17.62 64.69 71.09 78.17 15.32 0.00 0.00 41.38 10.63 11.36 37.96 73.50 34.45 60.53 52.76 9.37 67.44 35 ER11a ExonRegion 0 21.80 28.27 115.56 46.01 6.29 27.25 9.23 30.70 40.28 50.13 8.30 0.90 10.61 34.63 40.33 22.16 16.05 57.93 31.25 54.57 42.67 14.45 30.27 36 E11a_E12a KnownJunction 0 34.45 23.75 146.65 53.47 7.30 34.81 8.88 33.48 39.26 37.69 12.32 0.00 13.15 22.60 25.09 28.03 3.93 55.13 14.12 41.48 51.65 8.63 24.16 37 ER12a ExonRegion 0 30.97 28.05 129.19 75.92 28.11 34.38 17.96 54.08 56.59 61.05 11.14 1.64 3.97 33.84 37.79 17.38 12.46 40.95 43.16 59.57 53.50 24.03 32.04 38 E12a_E13a KnownJunction 0 8.82 31.70 179.56 84.07 18.00 30.04 23.80 66.75 73.23 63.58 4.16 0.00 6.82 26.55 13.35 25.55 0.00 56.54 13.55 70.82 28.85 7.29 14.17 39 ER13a ExonRegion 0 11.57 35.24 118.12 66.04 9.40 27.53 9.03 44.06 50.85 56.58 10.17 3.74 3.78 28.24 35.44 19.66 10.69 73.49 32.58 43.50 41.54 15.29 31.44 40 E13a_E14a KnownJunction 0 30.82 46.50 100.32 86.34 0.00 37.14 8.61 47.36 66.67 50.47 4.79 0.00 0.00 21.31 31.89 24.18 12.25 65.62 35.58 59.57 37.07 8.51 20.49 41 ER14a ExonRegion 0 19.50 29.17 99.99 52.84 13.30 26.54 17.78 52.15 61.49 53.69 8.62 2.72 5.56 37.54 26.03 13.88 11.98 44.50 50.92 57.33 53.55 13.93 29.87 42 E14a_E15a KnownJunction 0 37.71 34.27 127.29 58.30 15.62 21.98 20.80 63.75 60.88 58.34 7.69 0.00 0.00 36.73 32.63 15.04 12.53 79.05 54.50 58.42 65.05 16.90 28.08 43 ER15a ExonRegion 0 13.04 18.86 83.06 34.58 11.79 15.00 10.63 28.56 35.54 41.82 4.22 4.45 3.19 20.22 34.92 20.01 8.18 34.68 34.42 35.91 30.60 17.12 26.05 44 E15a_E16a KnownJunction 0 13.41 18.15 141.54 74.28 24.28 34.30 21.82 47.40 52.63 56.09 4.42 11.55 19.32 21.54 54.14 23.67 8.70 84.73 101.74 68.77 41.58 38.39 38.58 45 ER16a ExonRegion 0 29.15 25.93 168.18 67.62 19.82 26.32 13.25 55.02 53.78 51.26 11.44 0.98 7.89 39.38 41.28 28.47 20.33 58.29 61.68 65.04 56.55 20.36 26.36 46 E16_Da NovelBoundary 0 9.78 0.00 21.79 8.59 3.40 16.30 4.06 13.31 12.18 9.32 0.00 5.85 0.00 7.42 0.00 7.95 4.58 19.65 7.06 6.52 5.87 8.76 16.30 47 E16a_E17a KnownJunction 0 6.82 12.70 63.10 30.87 7.22 16.87 1.81 11.54 22.54 25.89 0.00 0.00 0.00 0.00 0.00 4.36 0.00 36.81 34.35 24.86 0.00 2.45 0.00 48 E16a_E18a KnownJunction 0 17.11 2.70 6.89 0.00 7.98 0.00 0.00 7.31 1.79 7.90 14.32 0.00 19.32 40.56 58.84 26.32 25.62 4.77 0.00 2.94 45.22 16.23 25.01 49 E17a_E18a KnownJunction 0 14.74 9.08 43.70 15.28 8.49 15.90 15.28 21.11 13.74 16.82 2.26 0.00 0.00 4.89 0.00 4.36 0.00 16.95 18.35 30.81 2.97 0.00 0.00 50 ER17a ExonRegion 0 10.58 19.32 125.60 55.20 20.51 29.95 12.14 56.75 46.52 51.42 3.87 0.00 0.00 4.87 0.48 5.94 0.55 79.76 49.90 59.93 5.51 3.13 2.94 51 I17_AR1 ActiveIntronRegion 0 1.06 0.00 4.55 3.05 1.34 4.58 1.99 6.44 3.67 4.24 0.00 0.00 3.86 4.68 5.55 5.94 6.60 5.51 4.78 3.19 8.79 6.25 10.28 52 ER18a ExonRegion 0 26.91 24.40 135.67 68.61 19.57 35.21 23.42 66.37 59.11 64.65 20.76 2.60 18.09 46.96 55.21 34.31 31.50 80.30 49.42 64.01 78.01 18.87 52.78 53 E18_Da NovelBoundary 0 9.85 6.71 13.78 18.85 8.49 21.86 14.22 12.45 16.15 12.52 2.58 0.00 6.82 7.42 10.75 4.36 8.60 4.44 22.68 17.64 32.87 5.69 15.19 54 E18a_E19b KnownJunction 0 35.12 42.95 112.24 79.78 11.71 58.72 35.90 62.39 66.23 61.57 19.32 7.65 0.00 48.80 60.57 24.35 21.60 64.13 50.45 72.10 90.87 22.47 58.73 55 E19_Aa NovelBoundary 0 37.86 38.94 32.08 18.78 25.21 4.77 10.07 14.87 11.60 18.35 7.63 6.60 0.00 12.01 9.64 19.23 8.88 18.24 12.71 11.38 28.29 4.96 12.21 56 ER19a ExonRegion 0 11.25 9.87 34.96 16.60 9.09 10.03 4.06 9.95 14.52 15.87 2.88 1.16 2.50 6.52 7.56 6.81 2.53 13.49 5.68 7.32 16.52 5.64 9.34 57 E19_Ab KnownBoundary 0 19.71 5.66 30.84 13.09 0.00 12.21 9.80 20.70 16.15 22.21 0.00 0.00 0.00 4.59 0.00 8.54 4.77 9.87 4.42 9.08 19.95 3.12 6.83 58 ER19b ExonRegion 0 43.23 72.49 186.88 105.09 26.59 41.82 28.69 93.65 85.03 88.77 15.35 6.44 2.75 35.75 47.66 40.27 21.29 122.63 104.11 98.42 91.08 33.41 58.30 59 E19a_E20a KnownJunction 0 24.30 78.28 193.02 116.37 27.59 34.18 22.04 78.08 78.44 80.91 12.85 0.00 6.17 33.32 41.66 42.72 29.83 105.83 60.61 62.26 69.87 31.23 46.95 60 ER20a ExonRegion 0 35.29 55.49 154.68 82.01 12.76 38.16 28.78 71.37 87.05 66.33 16.17 4.37 12.00 34.22 48.62 24.29 20.63 67.58 54.73 61.11 58.86 22.42 38.12 61 E20a_E21a KnownJunction 0 39.27 34.01 132.58 90.63 20.12 70.87 28.53 65.84 81.25 67.07 11.69 6.30 6.49 63.04 82.08 3.42 4.49 60.56 64.10 87.76 56.34 8.57 47.38 62 ER21a ExonRegion 0 25.51 37.15 146.76 98.42 22.11 41.22 19.55 79.66 75.71 55.88 14.07 7.64 7.82 54.68 54.26 49.32 20.99 100.31 69.48 70.17 59.58 33.79 50.06 63 E21a_E22a KnownJunction 1 55.71 27.89 210.76 164.68 23.94 56.22 34.14 117.80 105.53 81.79 8.90 13.50 6.82 61.86 37.09 80.66 22.07 141.89 78.50 74.14 69.19 51.50 92.19 64 E22_Aa NovelBoundary 0 7.48 3.35 31.78 8.12 8.40 0.00 4.33 9.78 4.95 7.66 4.95 0.00 0.00 0.00 14.46 3.85 4.58 12.19 9.13 11.70 5.56 8.33 4.18 65 ER22a ExonRegion 0 43.98 19.09 188.78 131.71 26.61 49.72 29.33 100.15 91.74 85.52 19.76 12.03 9.45 64.04 67.33 47.31 39.38 109.63 129.80 86.73 68.74 40.31 68.85 66 E22a_E23a KnownJunction 0 36.38 33.74 211.70 123.16 20.20 48.55 30.07 87.61 79.69 88.59 9.58 0.00 47.07 69.05 61.31 28.62 41.80 84.23 113.70 71.08 81.18 47.33 62.74 67 ER23a ExonRegion 0 23.16 23.26 88.07 53.13 16.71 23.80 11.72 36.09 40.51 39.83 10.24 4.63 8.88 26.55 37.24 24.43 16.47 47.78 53.93 47.62 38.85 23.87 25.40