Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM38A Gene 0 12.91 12.97 38.10 29.29 14.80 11.81 16.60 35.37 27.93 33.89 90.38 25.71 72.54 46.16 59.99 98.81 50.51 43.79 46.46 37.30 11.91 7.93 13.01 2 187762 Transcript 0 6.47 8.54 42.03 29.54 9.34 10.76 12.07 38.51 30.68 36.87 116.15 30.19 88.29 49.91 66.69 118.55 57.87 50.25 50.05 36.82 12.48 6.45 7.87 3 IG9_AR2 ActiveIntergenicRegion 0 1.69 5.11 5.46 5.09 1.23 1.38 1.23 2.31 3.32 6.17 10.16 0.00 0.35 3.57 1.43 10.00 1.78 10.34 8.57 8.98 4.24 0.56 2.05 4 ER1a ExonRegion 0 4.45 1.95 9.93 5.45 3.81 4.05 3.47 9.13 7.28 11.20 35.54 2.54 7.20 9.62 20.28 36.55 15.94 16.84 15.48 9.93 2.94 2.56 1.02 5 E1a_E2a KnownJunction 0 7.19 0.00 26.11 14.12 0.00 2.67 0.00 38.16 22.51 30.17 88.55 19.51 21.10 54.86 43.88 111.94 61.15 44.89 31.06 28.38 3.15 5.45 11.01 6 I1_AR1 ActiveIntronRegion 0 0.40 2.03 12.20 3.83 4.20 0.00 0.95 7.90 1.53 2.40 3.87 0.00 0.67 4.95 9.26 27.03 6.92 15.84 19.57 13.98 1.47 1.09 0.00 7 I1_AR2 ActiveIntronRegion 0 1.99 5.95 8.19 10.56 4.03 3.03 3.54 8.17 3.99 5.94 3.45 3.03 12.31 4.48 10.63 20.35 11.00 9.29 8.34 11.48 2.25 0.93 1.73 8 E2_Aa NovelBoundary 0 9.85 14.54 10.20 11.75 4.24 0.00 6.40 10.43 2.69 5.75 7.58 0.00 19.48 4.94 10.75 27.86 8.32 19.98 7.72 28.25 0.00 0.00 0.00 9 ER2a ExonRegion 0 4.31 9.47 43.82 27.37 5.97 13.67 10.51 37.35 26.40 39.04 106.80 16.82 55.59 38.57 62.96 115.33 68.04 61.51 42.71 45.55 13.62 3.94 10.19 10 E2_Da NovelBoundary 0 0.00 3.22 7.39 7.79 0.00 2.50 4.11 6.24 3.10 6.04 2.16 0.00 6.82 7.42 0.00 19.91 0.00 23.26 11.86 3.20 0.00 0.00 0.00 11 E2a_E3a KnownJunction 0 7.48 12.23 58.93 43.28 24.79 29.36 37.54 44.07 37.56 40.91 191.26 42.31 101.78 55.57 112.24 146.37 75.27 64.79 53.18 50.62 17.17 10.96 3.67 12 I2 Intron 0 1.26 2.84 7.64 7.69 2.67 0.37 1.32 5.13 4.03 6.47 8.47 2.18 5.39 3.10 7.04 20.72 5.26 19.22 13.96 13.14 0.88 0.83 1.76 13 I2_SR1 SilentIntronRegion 0 1.27 2.86 7.70 7.75 2.69 0.37 1.33 5.17 4.07 6.52 8.54 2.20 5.43 3.13 7.09 20.89 5.30 19.37 14.07 13.23 0.88 0.84 1.77 14 E3_Aa NovelBoundary 0 7.26 5.99 14.40 2.93 8.06 0.00 10.38 11.05 3.33 3.06 24.74 6.30 13.31 5.12 10.75 33.67 27.02 13.60 22.68 38.86 5.44 6.25 3.84 15 ER3a ExonRegion 0 4.91 11.94 63.92 42.69 12.96 10.08 11.00 54.16 41.97 48.92 157.59 36.34 102.67 70.95 99.88 150.84 90.68 68.44 68.29 56.68 18.37 6.40 12.33 16 E3_Da NovelBoundary 1 0.00 20.98 27.76 18.28 6.45 6.70 10.64 12.73 11.75 14.80 30.74 0.00 67.69 19.25 49.32 59.98 60.87 21.51 30.59 31.58 0.00 0.00 3.50 17 E3a_E4a KnownJunction 0 3.33 8.42 49.26 32.96 8.66 26.75 8.26 30.07 41.23 50.47 137.30 56.27 93.01 45.44 83.44 146.37 51.71 53.64 50.82 34.90 15.44 2.63 7.85 18 I3 Intron 0 2.84 14.19 11.77 9.05 7.04 3.05 6.11 6.50 5.43 8.99 17.02 7.98 15.62 11.75 13.90 32.24 15.24 12.33 12.65 11.65 1.66 2.01 1.73 19 I3_AR1 ActiveIntronRegion 1 5.27 21.49 20.05 15.16 10.54 4.56 9.06 6.41 12.97 18.06 41.68 9.93 28.56 25.83 29.65 56.70 37.64 21.32 25.09 26.02 3.65 3.02 3.04 20 I3_SR1 SilentIntronRegion 0 2.51 14.13 10.37 8.32 6.58 2.82 5.95 6.84 3.02 6.66 9.75 8.42 13.17 7.61 9.17 25.80 7.40 9.89 7.55 6.47 0.96 1.90 1.34 21 E4_Aa NovelBoundary 0 0.00 5.33 16.41 11.75 0.00 0.00 0.00 6.33 9.14 5.53 15.11 0.00 13.64 4.94 4.45 23.07 17.48 14.88 0.00 3.26 0.00 0.00 0.00 22 ER4a ExonRegion 1 6.54 11.12 59.29 45.46 8.51 14.61 12.20 49.97 44.28 41.42 160.69 22.09 150.19 64.82 90.86 166.57 81.25 64.15 99.33 51.43 10.22 4.17 9.44 23 E4_Da NovelBoundary 0 10.59 11.84 14.96 31.16 0.00 2.84 1.81 18.94 12.18 9.59 19.79 6.30 6.82 33.90 14.34 65.11 25.99 40.83 53.93 31.32 2.59 0.00 0.00 24 E4a_E5a KnownJunction 0 2.89 0.00 47.37 28.93 3.74 0.00 8.57 45.30 22.34 32.58 131.66 30.01 165.09 63.28 32.88 119.88 57.04 48.87 60.33 29.21 14.58 10.65 0.00 25 I4 Intron 0 1.61 6.03 8.57 7.85 6.46 3.92 4.75 4.09 3.55 4.60 13.47 5.36 20.54 10.45 13.97 22.16 8.43 8.63 13.85 11.01 0.76 0.72 2.24 26 I4_AR1 ActiveIntronRegion 1 1.76 4.20 8.32 1.68 3.33 9.88 2.74 4.27 7.61 6.38 20.04 4.44 4.80 12.20 23.92 19.72 16.42 6.10 15.85 17.64 0.91 0.00 0.00 27 I4_SR1 SilentIntronRegion 1 0.73 7.77 17.11 16.92 7.43 4.45 4.13 9.83 4.47 9.49 20.12 7.51 2.68 18.64 15.81 36.09 8.02 22.63 19.89 13.29 0.00 0.72 5.09 28 E5_Aa NovelBoundary 0 0.00 5.85 9.46 24.44 0.00 0.00 0.00 0.00 3.01 8.89 7.69 5.70 0.00 0.00 0.00 11.36 17.86 8.79 8.38 8.31 0.00 0.00 3.59 29 ER5a ExonRegion 0 3.32 5.45 30.29 19.98 4.51 2.46 8.03 36.22 29.77 33.62 98.12 33.42 105.25 50.55 69.48 102.59 49.09 43.61 44.24 25.96 12.12 4.96 4.03 30 E5_Da NovelBoundary 0 3.70 6.51 8.93 10.32 3.65 0.00 0.00 13.47 4.22 7.95 9.48 0.00 0.00 2.30 8.90 18.29 18.05 25.54 21.55 16.23 0.00 0.00 0.00 31 E5a_E6a KnownJunction 0 6.52 15.52 36.01 32.33 8.23 0.00 9.36 43.29 35.73 42.63 91.76 42.61 96.26 46.56 61.31 114.93 42.08 46.05 40.00 33.81 17.05 8.14 8.71 32 I5 Intron 0 2.14 2.70 11.20 9.24 2.20 1.51 3.26 8.63 4.30 7.88 6.47 2.08 6.17 4.41 8.13 22.16 9.80 11.49 10.47 8.34 2.36 0.66 0.56 33 I5_SR1 SilentIntronRegion 0 2.15 2.71 11.24 9.28 2.20 1.51 3.28 8.66 4.32 7.91 6.50 2.08 6.20 4.42 8.16 22.25 9.84 11.53 10.51 8.37 2.37 0.66 0.55 34 E6_Aa NovelBoundary 0 9.85 13.09 10.94 18.11 7.72 0.00 6.71 11.30 2.69 12.97 4.58 0.00 6.33 5.06 8.78 34.26 9.54 7.96 0.00 2.56 5.68 0.00 0.00 35 ER6a ExonRegion 0 20.28 17.81 37.45 32.35 21.61 14.78 23.83 35.91 28.43 34.66 78.37 30.16 73.06 48.83 56.33 92.71 44.36 39.93 45.08 38.59 12.59 11.12 18.27 36 IG10_AR1 ActiveIntergenicRegion 0 10.04 8.18 31.59 24.64 10.93 7.16 5.81 32.95 15.15 18.58 57.12 13.89 17.10 26.02 48.50 61.23 23.00 19.32 19.32 15.85 3.96 3.75 4.41