Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MRI1 Gene 0 58.00 37.79 81.77 77.95 51.35 84.86 40.26 69.05 58.57 66.83 79.40 43.18 46.54 139.75 143.88 76.16 88.50 62.04 56.90 40.93 63.26 54.66 65.44 2 40663 Transcript 0 31.81 16.26 29.17 25.78 26.60 57.79 24.93 28.01 23.08 24.95 35.74 22.89 23.08 62.42 68.28 34.73 40.01 25.55 31.45 25.54 32.88 29.59 38.20 3 445479 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 319545 Transcript 0 5.26 3.44 13.47 8.98 5.12 9.40 4.50 12.83 11.05 13.41 16.45 10.96 13.76 37.77 33.62 11.79 10.80 5.82 9.57 10.65 19.26 9.45 8.90 5 ER1a ExonRegion 0 12.26 2.03 3.17 2.50 3.23 16.81 4.91 7.13 7.41 1.19 17.07 0.00 0.00 19.62 28.53 7.93 11.00 9.01 1.73 11.08 23.69 2.52 12.85 6 ER1b ExonRegion 0 16.98 3.39 21.05 10.60 6.07 25.63 7.86 14.79 15.37 17.30 41.41 10.38 5.66 51.79 56.11 28.01 41.41 12.12 8.40 16.86 40.06 9.69 20.66 7 E1a_E2a KnownJunction 1 0.00 0.00 19.81 23.41 6.28 5.28 0.00 22.67 26.91 26.43 61.17 0.00 0.00 73.17 36.96 11.19 101.08 21.27 12.14 31.19 65.92 5.14 7.60 8 ER2a ExonRegion 1 10.90 6.63 43.22 27.21 8.60 30.75 10.19 23.60 26.08 41.15 54.87 9.78 12.70 112.38 111.26 41.42 54.84 38.67 17.63 38.08 51.87 17.17 39.02 9 E2_Da NovelBoundary 0 3.78 12.30 16.71 9.86 0.00 5.11 2.16 19.22 21.06 23.85 0.00 12.30 0.00 2.24 13.35 4.36 0.00 8.17 7.15 12.14 29.04 0.00 0.00 10 E2a_E3a KnownJunction 0 19.26 11.64 71.91 69.49 0.00 37.48 16.52 37.50 48.58 54.77 45.70 12.30 19.48 102.36 107.55 32.47 61.90 39.59 20.05 38.86 39.23 5.69 31.58 11 E2a_E4a KnownJunction 0 2.82 0.00 14.01 8.12 3.65 2.56 2.12 4.64 10.73 13.57 4.79 11.85 6.82 33.73 18.42 0.00 8.88 4.73 0.00 11.89 18.84 0.00 0.00 12 I2 Intron 0 9.44 14.94 13.25 10.84 5.85 14.76 7.41 18.47 18.35 15.99 8.14 10.18 18.49 14.80 18.80 13.26 14.43 19.84 12.26 10.42 14.07 4.92 10.53 13 I2_SR1 SilentIntronRegion 0 9.47 14.99 13.30 10.87 5.87 14.81 7.44 18.53 18.41 16.05 8.16 10.22 18.55 14.85 18.86 13.31 14.48 19.91 12.30 10.46 14.11 4.94 10.57 14 E3_Aa NovelBoundary 0 7.56 22.43 21.08 7.79 4.16 28.00 14.40 25.22 22.31 13.78 20.69 12.60 6.82 22.13 17.80 12.30 9.26 16.17 25.41 14.57 17.11 2.45 20.49 15 ER3a ExonRegion 0 25.66 20.43 64.53 54.99 10.34 30.72 16.33 44.43 53.09 61.54 95.10 35.82 36.24 167.39 151.67 79.86 89.27 66.26 45.17 41.11 71.45 34.35 65.79 16 E3_Da NovelBoundary 0 13.93 21.71 9.96 12.82 0.00 26.12 18.99 15.03 20.43 8.46 4.84 0.00 6.82 17.13 23.12 22.47 28.42 20.73 17.32 23.52 2.66 5.14 7.43 17 E3a_E4a NovelJunction 0 17.26 0.00 36.87 40.12 12.05 18.28 8.04 31.13 44.91 31.16 70.18 5.70 27.11 68.57 54.02 38.79 34.22 34.36 13.84 17.39 46.27 17.27 31.50 18 E3a_E5a KnownJunction 0 7.48 0.00 38.53 16.48 7.98 5.51 7.55 29.86 17.42 36.45 54.01 6.30 19.97 82.76 82.45 22.39 39.55 32.21 16.94 6.33 30.83 16.84 31.33 19 I3 Intron 0 10.79 19.78 15.15 20.23 11.74 69.60 12.88 24.14 22.27 17.43 11.00 5.56 4.22 27.63 26.58 22.21 23.49 24.18 18.89 11.36 20.12 5.19 22.64 20 I3_SR1 SilentIntronRegion 0 10.87 19.92 15.26 20.38 11.82 70.09 12.97 24.31 22.42 17.56 11.08 5.60 4.25 27.81 26.76 22.36 23.66 24.35 19.02 11.44 20.26 5.23 22.80 21 E4_Aa NovelBoundary 0 24.89 35.45 48.85 69.95 65.62 220.78 67.61 60.21 40.02 34.63 33.38 12.60 53.08 43.20 60.08 36.14 34.32 36.35 27.39 17.77 36.51 2.69 8.62 22 ER4a ExonRegion 0 12.96 10.30 23.06 18.82 11.70 25.63 9.13 33.85 20.03 26.66 44.57 21.01 34.46 71.63 82.44 27.75 23.51 12.75 28.70 20.06 38.95 25.96 26.69 23 E4_Da NovelBoundary 0 97.05 74.26 126.05 219.89 48.64 107.78 40.63 125.93 108.82 108.87 74.18 72.32 53.08 164.17 81.71 58.79 123.05 131.66 41.22 51.52 107.68 64.23 92.62 24 E4a_E5b KnownJunction 0 0.00 0.00 3.34 0.00 0.00 0.00 2.25 0.00 2.40 0.00 0.00 0.00 0.00 7.95 0.00 7.60 0.00 0.00 0.00 0.00 0.00 2.39 0.00 25 I4 Intron 0 45.85 20.19 28.02 37.58 21.74 52.97 17.33 23.25 32.40 29.31 55.83 35.75 35.49 95.21 78.56 63.05 44.69 38.98 27.32 15.36 63.67 26.33 27.83 26 I4_AR1 ActiveIntronRegion 1 46.66 20.56 28.51 38.16 22.11 53.84 17.64 23.61 32.95 29.82 56.80 36.31 36.13 96.88 79.98 64.18 45.50 39.65 27.81 15.64 64.82 26.77 28.33 27 E5_Aa NovelBoundary 0 56.60 40.12 57.89 78.48 32.34 105.34 12.23 84.86 57.96 77.85 69.70 13.50 19.80 124.96 65.64 80.41 44.60 49.79 69.74 10.93 82.66 29.27 35.34 28 ER5a ExonRegion 0 40.14 52.36 83.46 62.74 27.78 63.35 35.05 70.36 50.46 57.16 83.29 50.30 57.64 192.86 174.08 93.16 107.13 71.46 48.48 28.55 85.50 57.58 65.35 29 E5_Ab KnownBoundary 0 55.49 54.00 134.12 120.46 54.84 95.23 46.68 113.98 85.94 83.54 96.23 36.16 80.35 238.04 224.37 103.22 135.58 141.69 81.13 45.96 95.08 66.38 64.19 30 ER5b ExonRegion 1 61.97 46.77 112.11 95.41 39.89 84.10 40.89 85.36 94.63 87.99 98.23 28.07 68.20 222.69 213.10 99.83 104.44 92.99 53.00 45.50 108.76 58.29 77.70 31 E5a_E6a KnownJunction 0 60.60 26.57 122.44 89.63 23.51 34.24 34.09 70.65 96.56 76.10 76.55 13.95 53.24 149.21 164.66 79.98 117.25 79.88 19.77 34.07 71.60 39.80 40.21 32 ER6a ExonRegion 0 99.06 64.48 167.61 140.15 36.96 92.20 39.68 135.33 132.87 135.02 136.04 41.89 58.49 246.76 241.24 129.61 150.42 156.98 81.90 62.57 122.82 78.68 100.46 33 E6a_E7a KnownJunction 1 236.63 224.63 271.99 252.22 121.48 170.07 77.28 177.60 212.27 210.95 256.64 36.61 45.61 271.00 299.90 253.78 263.77 292.25 132.80 102.71 166.80 160.00 189.51 34 E7_Aa NovelBoundary 0 12.82 29.34 8.34 12.75 6.71 12.66 17.27 16.43 6.63 18.94 0.00 0.00 13.64 9.12 15.33 7.78 4.58 3.40 8.38 9.46 9.20 0.00 4.35 35 ER7a ExonRegion 0 112.85 84.94 182.82 201.95 121.68 146.70 75.58 155.98 112.72 133.44 157.06 70.03 85.67 245.20 280.97 158.92 195.94 139.41 98.49 61.37 118.76 78.11 118.49 36 E7_Da KnownBoundary 0 36.30 24.01 58.51 49.84 33.79 70.58 46.06 27.15 43.78 24.50 53.80 19.06 47.56 111.25 189.26 73.83 70.31 44.31 30.21 25.95 18.22 23.76 31.76 37 E7a_E7b KnownJunction 0 6.74 0.00 1.21 3.73 7.72 2.27 9.01 4.56 1.16 0.00 0.00 0.00 0.00 9.24 0.00 3.85 3.74 1.78 7.53 0.00 0.00 0.00 4.27 38 ER7b ExonRegion 0 51.36 30.50 55.17 49.07 49.96 98.76 44.95 48.90 38.74 48.70 54.41 45.78 46.16 105.22 108.04 61.53 69.02 42.09 61.18 40.00 42.06 56.66 63.54 39 E7_Ab KnownBoundary 0 184.33 153.20 157.95 178.40 158.91 160.76 199.04 150.91 169.10 142.21 87.76 19.06 54.05 71.69 137.83 127.74 132.68 113.91 99.11 143.24 107.18 65.64 124.89 40 ER7c ExonRegion 0 75.61 42.97 83.01 96.79 73.52 66.91 38.60 77.60 71.38 66.99 80.63 56.42 38.24 115.68 112.51 50.67 54.21 28.21 43.76 27.37 45.82 69.93 35.26