Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WIZ Gene 0 27.17 43.51 130.26 60.56 29.47 62.05 40.03 87.96 79.12 133.58 74.48 25.67 29.48 107.01 85.33 79.38 75.32 200.43 125.55 111.82 117.64 62.30 55.96 2 389282 Transcript 0 1.68 4.89 12.15 7.14 4.02 14.48 2.87 13.96 14.41 8.95 6.84 0.38 1.94 5.63 2.13 4.07 3.12 28.72 18.58 18.45 18.26 6.39 8.45 3 263381 Transcript 0 0.00 1.64 13.01 6.86 3.99 6.10 1.13 4.15 9.77 5.96 0.00 0.00 0.00 0.00 2.23 2.14 2.24 15.84 15.11 16.33 4.60 1.47 4.18 4 416927 Transcript 1 15.72 40.87 92.05 29.88 14.97 30.54 33.03 87.71 76.93 121.35 108.09 23.89 5.53 108.12 93.23 87.47 89.05 200.74 82.76 168.20 156.20 78.16 30.62 5 ER1a ExonRegion 0 0.00 0.00 0.46 0.57 0.69 0.00 0.44 0.90 1.38 0.71 0.31 1.18 0.00 0.03 0.68 0.04 1.48 1.88 1.05 1.22 1.06 0.89 2.00 6 E1a_E2a KnownJunction 0 0.00 2.70 4.38 1.43 3.57 0.00 0.00 1.85 3.36 3.73 2.68 0.00 0.00 0.00 0.00 0.00 4.58 8.42 0.00 2.88 2.78 2.82 3.16 7 ER2a ExonRegion 0 2.04 3.12 18.43 8.26 3.92 7.56 1.78 9.92 12.58 10.40 4.70 2.06 0.90 8.97 5.03 4.19 6.30 36.47 25.64 23.22 13.09 12.11 15.61 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E4a KnownJunction 0 0.00 3.29 24.22 12.45 7.98 10.05 2.25 8.30 17.07 10.58 0.00 0.00 0.00 0.00 4.45 4.27 4.49 29.97 30.21 29.34 2.90 2.94 8.37 10 ER3a ExonRegion 0 3.75 7.14 10.13 7.08 3.76 7.39 1.81 8.64 12.50 8.13 5.03 1.51 0.94 6.15 3.56 4.73 3.58 23.43 15.98 13.92 13.30 6.14 5.99 11 E3a_E4a KnownJunction 0 2.96 2.83 32.29 11.79 8.15 15.05 2.25 25.38 22.19 16.71 15.16 0.00 6.82 9.48 0.00 11.54 0.00 51.98 38.02 17.13 27.24 11.33 15.54 12 ER4a ExonRegion 0 3.06 13.59 26.56 16.15 7.83 18.05 2.54 19.76 25.90 18.19 5.78 2.98 3.36 7.70 5.95 5.66 4.88 65.85 49.21 32.49 28.19 18.55 20.60 13 E4a_E6a KnownJunction 0 0.00 9.60 6.18 9.69 4.16 35.49 7.42 21.81 22.95 10.96 7.16 0.00 0.00 6.89 4.94 0.00 8.88 39.46 20.33 42.76 32.49 8.08 12.29 14 E4a_E7a KnownJunction 0 0.00 0.00 1.80 1.27 0.00 2.16 0.00 0.00 2.46 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 0.00 3.32 6.30 0.00 0.00 15 I4_SR4 SilentIntronRegion 0 6.68 1.80 11.47 6.54 4.85 13.22 8.79 14.09 12.69 20.76 11.70 6.59 8.97 12.83 14.46 15.43 14.05 33.00 12.84 26.00 14.16 5.42 9.37 16 E5_Aa NovelBoundary 1 25.86 24.01 67.12 20.44 3.65 23.17 18.24 74.34 72.08 99.79 67.07 0.00 32.95 93.41 68.73 81.52 39.64 159.18 77.65 117.42 77.04 37.47 31.16 17 ER5a ExonRegion 0 4.40 19.91 55.60 18.33 11.35 16.84 19.04 47.28 45.98 84.68 71.03 10.27 11.06 85.79 73.22 52.49 61.98 111.21 50.41 106.37 98.84 50.81 25.14 18 E5a_E6a KnownJunction 1 27.04 61.83 128.50 41.42 18.59 44.24 47.03 128.15 107.87 158.03 145.14 37.51 0.00 130.44 113.23 122.45 116.13 290.26 115.11 230.04 213.56 105.51 36.11 19 ER6a ExonRegion 0 13.06 48.54 118.93 49.40 26.61 71.42 37.26 91.89 100.45 171.88 117.67 29.62 38.45 187.45 104.35 122.37 120.40 342.49 193.18 177.76 179.28 107.59 98.74 20 E6_Da NovelBoundary 0 12.82 0.00 0.00 1.37 3.48 4.94 5.92 5.01 2.98 4.22 11.85 0.00 0.00 30.96 8.90 12.99 4.58 10.94 9.32 13.93 8.77 14.39 7.68 21 E6a_E7a KnownJunction 0 0.00 24.34 82.52 36.09 28.35 56.79 15.37 26.37 28.39 115.10 46.96 27.46 0.00 73.99 28.56 51.95 47.69 99.49 91.39 74.66 66.10 5.57 26.80 22 I6 Intron 0 12.43 9.17 12.85 11.62 6.41 17.44 14.33 21.84 15.18 26.43 27.00 12.91 12.36 46.55 33.71 32.71 28.49 51.82 33.82 34.22 25.72 16.81 22.17 23 I6_SR1 SilentIntronRegion 1 13.28 5.34 5.30 6.94 3.74 12.93 11.50 12.08 7.13 13.53 17.41 6.11 3.73 33.76 21.86 18.09 27.08 27.76 18.58 20.15 11.08 8.70 17.13 24 I6_AR1 ActiveIntronRegion 0 19.42 8.94 13.96 17.27 9.04 20.33 18.67 32.12 15.47 33.35 31.33 23.96 14.96 47.17 39.00 48.51 30.01 76.69 46.56 37.48 25.11 19.75 31.34 25 I6_SR2 SilentIntronRegion 0 12.80 10.59 7.12 3.20 4.11 8.87 5.17 19.98 9.79 32.43 19.10 17.92 18.43 39.73 30.16 31.31 22.80 31.67 25.63 27.96 19.58 10.32 23.02 26 I6_AR2 ActiveIntronRegion 1 9.20 21.97 31.08 12.84 10.70 24.69 22.91 39.76 37.95 41.92 57.08 10.35 13.43 82.64 53.54 49.25 48.80 95.35 67.67 73.38 73.21 37.02 25.21 27 I6_SR3 SilentIntronRegion 0 8.09 5.72 9.60 12.16 4.86 16.37 9.62 13.78 10.37 25.13 16.60 12.76 18.43 38.79 30.74 26.33 17.28 33.86 20.72 23.86 13.99 11.62 18.63 28 E7_Aa NovelBoundary 0 17.56 3.22 20.99 10.12 7.72 28.51 24.73 15.53 5.76 28.98 24.37 20.26 27.92 22.78 31.89 3.50 28.61 25.33 31.44 28.89 22.43 8.94 7.43 29 ER7a ExonRegion 0 29.49 71.75 234.62 115.93 50.65 119.00 72.05 170.50 154.79 275.02 154.05 46.93 60.78 225.29 171.12 173.47 165.18 483.69 266.70 270.44 236.65 129.14 108.57 30 E7_Da NovelBoundary 0 16.74 0.00 10.88 12.65 11.21 28.79 13.03 12.77 12.47 33.20 35.11 0.00 30.03 46.80 41.41 33.67 55.07 29.10 27.39 23.33 30.52 23.33 11.78 31 E7a_E8a KnownJunction 0 39.86 67.09 225.13 125.29 56.88 124.02 60.50 164.75 140.33 275.47 121.77 36.91 44.80 173.41 146.36 99.80 142.68 380.96 185.13 260.21 247.60 60.07 86.05 32 I7 Intron 0 17.93 7.88 11.79 7.05 10.79 9.77 11.65 12.68 8.76 14.90 21.68 21.26 11.40 42.12 34.07 30.94 33.30 18.17 20.56 17.51 24.54 14.97 13.74 33 I7_SR1 SilentIntronRegion 0 17.99 7.90 11.83 7.07 10.83 9.80 11.68 12.72 8.79 14.94 21.75 21.32 11.43 42.26 34.18 31.04 33.40 18.23 20.63 17.57 24.62 15.01 13.79 34 E8_Aa NovelBoundary 0 6.59 6.38 6.56 7.82 0.00 5.11 1.90 4.60 6.11 10.15 20.79 0.00 0.00 26.72 10.75 30.85 13.46 10.49 4.33 14.32 12.17 6.00 11.69 35 ER8a ExonRegion 0 38.77 68.84 270.83 123.38 36.69 125.79 81.24 155.95 157.44 285.82 157.67 32.86 41.41 219.59 187.38 146.56 156.86 392.45 230.52 249.90 256.66 118.37 109.31 36 E8_Da NovelBoundary 0 0.00 6.18 3.93 14.88 16.98 30.66 4.02 15.12 6.97 13.65 5.00 0.00 6.82 12.18 17.80 21.53 13.37 35.53 8.47 8.76 14.39 11.33 12.04 37 E8a_E9a KnownJunction 0 65.94 84.59 454.33 182.56 49.49 141.96 100.16 271.09 277.25 374.19 162.30 49.52 47.56 269.18 280.49 200.46 219.73 514.98 259.49 384.72 316.86 123.51 106.28 38 E9_Aa NovelBoundary 0 3.78 3.09 14.52 5.03 4.16 16.35 17.09 11.13 4.95 30.84 4.79 5.40 0.00 4.77 18.67 7.52 3.83 39.05 16.00 27.93 11.06 3.12 7.51 39 ER9a ExonRegion 0 33.75 54.96 238.07 85.34 31.09 97.49 58.24 155.47 143.69 261.67 133.62 47.70 36.72 190.53 172.70 107.79 143.71 245.13 165.56 193.76 225.72 96.19 82.77 40 E9a_E10a KnownJunction 1 95.42 140.37 298.36 136.25 78.44 238.10 125.51 224.47 199.36 362.45 242.17 30.76 46.91 302.90 261.95 227.55 237.03 450.72 318.69 267.05 287.76 147.02 148.79 41 ER10a ExonRegion 0 72.54 84.17 278.39 102.88 48.96 136.43 78.05 203.17 167.91 327.37 185.75 51.22 72.22 229.97 170.46 210.81 151.40 489.96 301.00 206.13 285.03 159.94 144.60 42 E10_Da NovelBoundary 0 9.71 12.23 4.26 9.72 21.31 10.90 5.79 10.56 5.47 11.47 2.68 6.30 0.00 10.42 6.30 10.94 0.00 14.59 13.18 14.83 0.00 2.69 8.37 43 E10a_E11a KnownJunction 0 195.00 118.14 435.29 208.66 85.23 127.48 98.88 270.92 184.46 356.35 189.26 64.97 99.99 258.34 216.58 186.28 139.22 486.08 489.43 240.58 325.50 199.99 138.89 44 I10 Intron 0 16.01 8.87 12.03 12.47 7.38 10.45 8.84 10.32 5.73 16.89 8.43 4.81 3.53 17.55 10.91 10.85 9.40 17.99 15.03 17.99 7.85 10.01 6.53 45 I10_AR2 ActiveIntronRegion 0 18.69 7.59 16.85 18.84 5.12 9.29 10.08 18.71 8.73 26.31 11.07 3.80 4.83 17.57 16.07 19.27 11.52 28.24 25.19 24.06 12.21 15.51 9.76 46 E11_Aa NovelBoundary 0 40.97 12.50 23.77 17.48 25.38 8.18 9.89 8.79 2.60 28.39 7.26 19.96 0.00 35.38 23.24 23.67 31.23 26.36 61.18 28.25 3.09 2.45 21.26 47 ER11a ExonRegion 0 61.00 79.11 212.54 105.38 61.57 96.00 73.20 141.09 108.66 184.24 97.63 47.58 54.22 142.76 123.90 118.45 100.64 253.56 177.29 125.00 143.52 80.82 73.85