Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AC004490.2	Gene	0	1.11	0.00	0.96	0.71	2.34	0.32	1.16	1.35	0.32	2.40	2.03	0.00	0.58	8.43	8.68	2.60	0.00	1.61	1.67	2.24	3.47	1.10	1.54
2	429944	Transcript	0	0.30	0.00	0.26	0.19	0.88	0.27	0.41	0.70	0.09	0.64	0.69	0.00	0.15	3.28	3.41	0.69	0.00	0.43	0.73	0.60	1.09	0.50	0.41
3	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	I1_AR4	ActiveIntronRegion	0	50.68	27.05	142.01	68.34	37.80	34.91	14.89	86.52	125.02	84.39	66.80	15.28	22.86	102.73	98.92	93.39	48.89	145.05	74.45	63.88	68.78	41.80	50.20
6	Ix_SR2	SilentIntronRegion	0	11.43	3.64	44.28	10.41	6.66	5.77	0.96	16.47	9.59	24.05	11.27	2.66	5.70	17.64	13.36	28.95	13.25	44.97	19.78	9.55	7.54	8.61	5.40
7	Ix_AR2	ActiveIntronRegion	0	22.07	5.82	49.85	14.34	8.09	13.51	5.90	16.46	14.03	17.94	12.82	1.90	7.04	24.78	20.31	25.32	18.40	35.83	16.68	4.70	8.29	8.14	5.14
8	Ix	Intron	0	22.75	6.01	12.94	11.60	11.59	5.49	8.45	10.65	11.67	10.77	8.45	5.67	7.80	12.54	12.91	13.69	8.58	23.98	8.66	10.31	7.73	5.25	5.20
9	Ix_SR4	SilentIntronRegion	0	36.76	8.24	12.31	11.66	14.46	8.96	14.76	14.32	13.01	12.11	7.83	7.35	14.75	15.46	10.12	17.57	11.71	16.81	8.07	12.22	10.79	5.98	5.41
10	Ix_AR3	ActiveIntronRegion	0	32.08	7.13	10.78	8.09	18.34	4.99	12.24	7.83	14.41	12.54	15.71	9.90	11.84	22.47	26.08	19.41	9.47	21.61	12.69	13.56	10.90	7.64	6.13
11	Ix	Intron	1	50.53	16.66	78.32	24.48	27.09	27.07	18.72	51.35	67.42	64.85	44.81	16.22	14.79	81.02	86.43	79.69	47.70	90.84	59.81	52.12	43.58	31.72	32.23
12	Ix_AR2	ActiveIntronRegion	0	74.61	10.00	138.30	41.95	21.89	26.38	18.56	72.53	94.05	90.00	58.52	8.09	9.36	105.73	100.82	111.61	49.91	181.93	71.88	67.04	53.21	39.82	40.34
13	Ix_AR1	ActiveIntronRegion	0	38.71	20.07	48.74	15.88	29.81	27.50	18.87	41.03	54.49	52.62	38.20	20.37	17.60	69.01	79.57	64.15	46.85	45.74	54.14	44.94	38.96	27.82	28.36
14	Ix	Intron	0	9.34	1.68	21.48	7.84	7.38	11.80	5.60	17.99	24.02	27.48	20.07	4.17	4.94	36.64	25.56	34.69	22.14	52.07	30.15	27.37	29.75	14.17	19.43
15	Ix_AR1	ActiveIntronRegion	0	10.58	3.79	25.42	9.64	4.63	8.36	4.05	15.58	24.32	28.67	15.58	4.27	3.88	32.21	26.07	32.71	18.01	48.72	26.56	14.86	30.18	9.30	16.26
16	Ix_SR1	SilentIntronRegion	0	8.93	0.94	20.18	7.24	8.39	13.07	6.17	18.93	24.02	27.20	21.76	4.15	5.35	38.39	25.50	35.56	23.72	53.52	31.56	31.95	29.74	15.97	20.65
17	Ix	Intron	1	14.93	6.44	34.24	18.11	15.16	19.45	11.31	27.05	33.72	47.87	50.26	8.92	7.02	86.42	63.50	84.72	45.58	81.14	40.05	38.95	39.00	19.69	29.30
18	Ix_AR1	ActiveIntronRegion	0	14.96	6.45	34.31	18.14	15.19	19.49	11.33	27.10	33.79	47.96	50.35	8.93	7.04	86.58	63.61	84.87	45.66	81.29	40.12	39.03	39.07	19.72	29.36
19	E2_Aa	NovelBoundary	0	7.48	0.00	3.81	3.50	0.00	0.00	2.12	4.35	1.16	7.49	2.37	7.65	0.00	16.72	20.40	0.00	0.00	14.43	13.93	2.94	9.39	5.82	0.00
20	ER2a	ExonRegion	0	2.08	0.00	1.79	1.33	3.50	0.00	1.80	2.53	0.60	4.47	3.27	0.00	1.08	12.41	13.37	4.86	0.00	3.01	2.14	4.17	5.89	1.36	2.88
21	E2_Da	NovelBoundary	0	13.34	0.00	6.83	4.89	0.00	2.56	2.25	8.46	9.49	8.46	7.42	0.00	0.00	39.08	35.85	26.92	0.00	8.83	11.67	9.20	5.87	0.00	3.67
22	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E3_Aa	NovelBoundary	0	3.70	5.66	9.05	4.93	0.00	10.90	3.93	8.63	1.59	4.38	6.53	14.25	20.62	26.84	24.60	7.86	8.79	9.20	17.98	12.21	11.31	3.12	4.01
24	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	2.68	1.76	1.09	0.00	0.00	0.00	1.55	0.00	0.00	9.01	3.24	0.00	0.00	0.00	3.00	0.00	1.77	2.00	0.00
25	E3_Da	NovelBoundary	0	7.56	2.76	22.62	6.73	8.40	10.85	1.99	7.60	14.09	18.24	9.11	24.31	0.00	45.79	44.13	16.06	27.49	18.24	4.61	15.15	11.61	0.00	0.00
26	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	Ix	Intron	0	43.55	21.09	33.50	25.80	19.56	19.59	13.23	23.04	13.00	31.37	30.33	10.81	11.87	100.84	90.75	76.25	37.12	23.05	22.83	34.08	28.43	11.09	24.31
28	Ix_SR3	SilentIntronRegion	0	27.05	20.27	7.00	11.95	21.55	14.06	9.98	8.88	5.65	11.58	34.32	16.63	22.32	94.22	80.94	76.74	44.71	11.17	34.14	24.20	36.30	8.79	33.02
29	Ix_AR4	ActiveIntronRegion	0	31.35	20.48	38.62	24.48	21.93	25.53	16.07	20.61	14.19	33.43	26.13	13.14	13.04	114.96	90.78	72.38	33.47	25.38	16.83	40.46	26.58	8.83	21.48
30	Ix_SR2	SilentIntronRegion	0	54.35	17.15	49.86	36.37	14.31	21.40	12.47	36.08	18.82	47.37	34.57	6.82	4.51	103.93	100.92	84.45	37.88	31.75	22.04	39.87	26.71	15.90	24.71
31	Ix_AR1	ActiveIntronRegion	0	79.00	38.24	40.06	32.40	28.21	17.76	18.86	24.95	12.06	29.70	21.47	6.17	9.04	92.58	95.50	69.42	30.10	23.02	14.50	31.52	23.23	8.30	12.55
32	Ix	Intron	0	5.55	0.33	0.00	0.00	5.27	1.50	0.87	0.84	0.00	0.00	3.80	5.26	3.80	24.39	6.16	8.77	3.25	0.00	0.00	1.74	0.00	0.00	0.00
33	Ix_SR1	SilentIntronRegion	0	5.35	0.47	0.00	0.00	4.92	2.11	0.91	1.18	0.00	0.00	2.21	5.73	5.32	21.60	4.86	6.83	0.76	0.00	0.00	0.98	0.00	0.00	0.00
34	Ix_AR1	ActiveIntronRegion	0	6.13	0.00	0.00	0.00	6.20	0.00	0.77	0.00	0.00	0.00	7.84	4.13	0.00	31.71	9.46	13.78	9.57	0.00	0.00	3.68	0.00	0.00	0.00
35	I3_SR1	SilentIntronRegion	0	1.91	1.31	1.89	4.45	0.34	9.45	0.17	1.33	7.82	0.22	8.96	3.67	6.69	9.77	3.47	5.37	3.83	2.01	2.05	3.56	1.99	0.54	0.00
36	I3_AR2	ActiveIntronRegion	0	0.59	0.69	4.12	5.10	2.28	7.53	0.23	2.20	13.00	0.29	16.17	3.17	2.64	11.63	2.33	2.87	3.51	3.29	0.00	2.18	0.38	0.36	1.00
37	I3	Intron	0	274.55	149.16	148.37	126.10	234.84	212.18	70.81	138.57	163.02	133.72	205.21	91.94	50.71	282.49	289.26	191.79	185.19	77.95	127.28	99.83	175.57	239.51	147.30
38	I3_SR1	SilentIntronRegion	0	4.39	1.21	16.19	2.53	0.37	0.63	0.99	1.96	4.39	0.83	0.67	1.94	1.07	0.46	3.30	3.50	2.19	2.99	3.43	1.51	1.68	1.30	4.70
39	I3_AR1	ActiveIntronRegion	0	0.00	2.03	23.16	0.27	0.00	0.00	1.32	0.00	3.71	0.23	0.00	0.00	0.00	0.00	5.80	2.08	3.30	0.00	5.42	2.13	0.00	0.00	6.75
40	I3_SR2	SilentIntronRegion	0	1.06	1.31	23.72	2.53	0.00	0.00	0.66	0.00	5.82	1.15	0.14	0.00	0.00	0.00	7.46	2.97	2.36	0.00	7.51	2.13	0.00	0.00	4.20
41	I3_AR2	ActiveIntronRegion	0	2.12	0.00	24.10	2.73	0.00	0.00	1.32	0.00	6.31	1.15	1.93	0.00	0.00	0.00	6.45	2.97	0.00	0.00	6.37	2.13	0.00	0.00	0.33
42	I3_SR3	SilentIntronRegion	0	9.97	6.37	29.54	9.04	6.27	3.81	3.34	1.46	13.16	3.77	6.26	3.99	0.12	0.43	3.82	2.19	4.00	2.14	12.57	1.01	0.75	1.15	4.33
43	I3_AR3	ActiveIntronRegion	0	917.88	500.98	461.10	419.82	792.78	715.84	236.88	464.23	539.88	449.96	691.83	306.31	169.17	954.32	970.03	640.55	620.89	256.92	420.99	334.06	590.06	807.08	487.10
44	I3_AR1	ActiveIntronRegion	0	587.03	322.92	1.65	0.00	132.69	486.81	251.09	1.17	0.00	0.78	978.55	20.64	30.99	463.48	2366.72	422.76	921.48	57.99	167.89	99.45	682.17	451.17	273.61
45	I3_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.56	1.15	0.00	0.00	0.00	1.70	11.75	4.42	3.06	4.06	1.09	0.00	0.00	0.00	0.00
46	Ix	Intron	0	26.99	83.81	505.15	115.02	7.93	103.83	20.41	49.64	104.25	56.25	1.15	0.00	0.00	3.65	2.68	0.00	0.00	153.36	69.87	146.36	3.27	1.24	3.48
47	Ix_AR1	ActiveIntronRegion	0	27.30	84.78	510.97	116.37	8.03	105.03	20.65	50.21	105.44	56.91	1.16	0.00	0.00	3.70	2.71	0.00	0.00	155.06	70.70	148.02	3.29	1.25	3.52
48	Ix	Intron	0	27.17	154.34	678.17	167.96	14.52	148.50	39.46	86.54	141.60	69.94	1.50	0.00	0.00	3.91	3.01	0.00	1.71	279.52	93.31	240.12	7.21	0.36	8.10
49	Ix_AR1	ActiveIntronRegion	0	27.26	154.85	680.40	168.52	14.57	148.99	39.60	86.83	142.07	70.17	1.50	0.00	0.00	3.92	3.02	0.00	1.71	280.44	93.62	240.91	7.23	0.36	8.12
50	I3	Intron	0	15.63	130.89	516.59	147.15	15.06	133.10	28.87	77.91	147.38	58.32	1.36	0.84	0.00	3.82	3.08	0.70	0.77	316.78	109.79	255.69	10.84	0.24	12.74
51	I3_AR1	ActiveIntronRegion	0	15.70	131.49	518.92	147.82	15.12	133.69	29.00	78.27	148.05	58.57	1.37	0.84	0.00	3.83	3.10	0.70	0.78	318.21	110.27	256.84	10.89	0.25	12.80
52	Ix	Intron	0	31.11	14.73	78.74	38.94	15.39	26.80	17.94	34.90	25.88	59.57	52.05	9.15	8.39	54.67	50.75	51.03	42.33	98.85	32.57	36.99	31.44	21.22	16.27
53	Ix_SR1	SilentIntronRegion	0	33.82	14.37	74.63	33.60	15.12	29.63	17.10	38.01	26.51	58.32	51.83	6.61	3.97	53.44	55.79	47.88	42.89	109.28	30.63	33.45	34.75	22.21	17.45
54	Ix_AR4	ActiveIntronRegion	0	10.58	68.54	43.54	22.05	16.05	7.23	22.27	32.84	7.92	8.30	3.41	22.67	23.45	4.49	24.92	12.94	13.40	94.45	33.35	41.43	9.98	4.66	6.22
55	I3	Intron	0	3.39	9.37	25.61	7.33	7.24	19.48	5.97	22.19	18.99	21.41	4.45	1.43	0.00	6.38	9.59	6.55	7.61	12.79	4.79	12.79	5.74	3.55	1.77
56	I3_SR1	SilentIntronRegion	0	3.44	9.50	25.96	7.43	7.34	19.73	6.05	22.50	19.25	21.68	4.52	1.45	0.00	6.45	9.73	6.64	7.71	12.97	4.85	12.96	5.82	3.60	1.79
57	Ix	Intron	1	22.15	38.48	45.77	26.49	20.39	30.53	16.22	45.81	39.22	78.22	60.17	8.75	8.70	86.07	75.03	49.93	66.34	112.41	35.63	74.06	28.32	22.52	32.64
58	Ix_AR1	ActiveIntronRegion	0	22.18	38.54	45.84	26.53	20.42	30.57	16.24	45.87	39.28	78.33	60.26	8.76	8.71	86.19	75.15	50.00	66.43	112.58	35.69	74.17	28.36	22.55	32.69
59	Ix	Intron	1	2.31	5.19	17.30	6.66	2.92	8.02	2.90	10.32	6.03	26.77	32.39	6.77	10.45	57.98	35.00	14.05	43.29	24.76	11.60	18.62	20.05	10.63	10.70
60	Ix_SR1	SilentIntronRegion	0	2.35	5.26	17.54	6.76	2.95	8.13	2.95	10.47	6.12	27.14	32.85	6.87	10.60	58.76	35.49	14.26	43.92	25.12	11.77	18.89	20.33	10.78	10.85
61	Ix	Intron	0	11.84	8.98	10.72	8.13	5.84	8.51	7.71	10.20	9.38	13.22	16.27	7.48	7.37	19.29	17.52	21.91	26.88	22.03	13.19	13.16	15.24	8.82	15.77
62	Ix_SR2	SilentIntronRegion	0	14.34	6.17	2.29	1.27	5.44	3.14	0.34	5.02	0.76	3.37	10.79	5.17	7.26	2.41	10.39	13.42	9.05	3.64	2.47	5.70	5.26	3.16	6.16
63	Ix_AR1	ActiveIntronRegion	0	15.22	15.55	15.66	12.53	8.91	10.59	8.59	16.40	14.80	21.20	22.29	11.54	9.59	23.04	18.71	25.77	38.13	27.69	16.86	16.14	22.40	12.01	23.62
64	Ix	Intron	0	3.54	2.44	5.09	2.70	1.72	1.26	4.03	5.41	2.92	5.71	4.31	1.87	3.71	4.02	10.31	6.37	11.88	14.92	5.60	3.37	15.01	5.36	9.82
65	Ix_SR2	SilentIntronRegion	0	3.55	2.56	5.53	2.84	1.87	1.11	4.32	5.76	3.17	6.13	4.59	1.70	3.50	4.26	10.21	6.37	11.99	15.37	5.79	3.67	15.90	5.14	9.72
66	Ix	Intron	0	7.86	7.19	12.75	8.08	4.73	3.24	6.09	8.88	5.69	11.78	10.42	7.61	6.14	11.43	19.34	18.13	21.59	29.56	10.70	13.92	26.69	9.76	19.99
67	Ix_SR1	SilentIntronRegion	0	7.88	7.21	12.79	8.11	4.75	3.24	6.11	8.91	5.71	11.82	10.46	7.63	6.17	11.46	19.41	18.18	21.67	29.66	10.73	13.96	26.78	9.79	20.05
68	Ix	Intron	0	9.85	6.49	8.03	10.33	4.84	3.95	5.71	8.22	6.82	4.86	9.92	11.93	15.85	8.75	25.32	20.89	30.74	34.55	14.69	12.75	26.60	8.35	24.82
69	Ix_SR1	SilentIntronRegion	0	9.87	6.50	8.05	10.35	4.85	3.96	5.72	8.23	6.84	4.87	9.93	11.95	15.88	8.76	25.37	20.92	30.78	34.61	14.72	12.77	26.63	8.37	24.85
70	E4_Aa	NovelBoundary	0	16.74	2.70	31.05	28.83	0.00	2.90	3.93	27.97	14.55	16.09	31.38	12.15	48.54	16.60	53.90	36.91	79.85	94.35	20.14	21.73	83.83	22.53	88.01
71	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	7.25	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.00