Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF846 Gene 0 31.18 16.78 10.04 16.18 32.88 11.71 18.01 16.69 29.32 16.64 0.83 12.60 5.76 8.37 4.67 19.54 16.65 14.85 16.07 21.52 33.92 14.11 23.38 2 397902 Transcript 0 37.01 18.49 7.35 9.27 30.54 6.46 11.23 13.52 29.45 15.44 2.05 14.54 5.53 9.99 4.71 13.53 18.34 15.41 15.43 19.19 43.80 19.57 22.64 3 IG50_AR2 ActiveIntergenicRegion 0 2.34 0.50 3.58 0.50 0.98 0.22 0.81 4.11 1.53 0.84 0.00 0.00 0.00 0.09 0.36 1.46 1.21 2.70 0.78 0.00 15.13 11.88 5.04 4 IG50_AR1 ActiveIntergenicRegion 0 5.72 0.00 2.45 0.00 3.24 1.34 1.79 0.00 2.39 1.72 0.00 0.00 0.00 0.48 0.31 3.83 1.11 3.88 3.65 0.71 27.71 4.98 14.72 5 IG50_SR1 SilentIntergenicRegion 0 7.62 2.04 1.53 2.04 5.31 0.99 2.25 1.82 2.67 1.87 0.25 1.01 0.32 1.27 1.21 3.03 2.02 2.73 4.65 2.25 8.31 3.40 11.81 6 ER1a ExonRegion 0 11.21 4.96 2.71 3.43 6.53 4.40 3.18 3.00 8.10 3.63 0.88 0.90 1.58 4.17 2.87 6.24 6.88 7.45 8.30 9.48 27.08 8.94 11.88 7 E1_Da NovelBoundary 0 6.96 2.76 4.32 3.23 8.66 0.00 12.63 3.61 6.74 2.82 0.00 0.00 0.00 0.00 0.00 7.52 4.77 1.74 12.33 0.00 13.16 0.00 3.67 8 E1a_E2a KnownJunction 0 13.19 19.08 7.27 4.03 4.33 0.00 0.00 12.03 26.10 6.61 0.00 0.00 6.82 17.36 0.00 4.27 16.83 16.54 3.95 20.65 12.11 9.37 12.04 9 I1 Intron 0 5.51 3.01 1.19 3.48 6.65 0.98 3.76 3.96 3.92 1.72 0.00 3.06 0.73 1.80 1.02 3.17 3.12 3.32 3.77 2.90 9.00 2.34 11.64 10 I1_SR1 SilentIntronRegion 0 5.52 3.01 1.19 3.49 6.66 0.98 3.77 3.97 3.93 1.72 0.00 3.07 0.74 1.80 1.02 3.17 3.13 3.32 3.78 2.90 9.02 2.35 11.66 11 E2_Aa NovelBoundary 0 34.23 11.97 1.63 3.33 11.29 2.38 19.34 6.86 12.12 4.49 0.00 6.15 0.00 4.94 9.15 11.19 4.77 5.97 12.80 8.82 39.72 19.17 31.76 12 ER2a ExonRegion 0 25.21 7.95 7.87 5.72 11.16 1.89 7.30 9.78 14.60 10.80 0.99 0.00 5.30 8.71 7.25 15.90 19.31 17.48 11.63 18.70 75.72 22.34 22.44 13 E2_Da NovelBoundary 0 9.48 0.00 1.54 0.00 24.79 11.02 11.48 8.38 12.73 7.31 0.00 13.95 6.82 0.00 4.45 18.37 8.70 9.04 9.04 0.00 31.07 0.00 16.56 14 E2a_E3a KnownJunction 0 23.12 15.39 5.80 5.06 10.44 0.00 4.24 13.43 17.01 3.57 0.00 0.00 0.00 2.47 0.00 15.55 33.01 8.87 4.05 30.81 24.59 19.90 24.76 15 I2 Intron 0 14.52 5.14 2.97 4.95 9.18 2.15 10.99 5.81 7.81 6.02 0.00 5.15 2.44 3.41 1.48 6.98 8.04 5.89 6.04 9.99 14.92 4.51 12.72 16 I2_AR1 ActiveIntronRegion 0 18.64 2.88 6.19 5.70 15.54 2.99 8.41 4.42 10.90 5.35 0.00 2.91 2.70 6.56 1.18 11.39 12.49 15.12 12.95 12.80 36.33 6.47 23.63 17 I2_SR1 SilentIntronRegion 0 13.23 5.69 2.22 5.28 7.69 1.84 11.58 6.60 7.78 6.48 0.00 5.04 2.70 2.60 1.78 6.31 7.06 3.50 4.57 9.79 9.10 4.08 10.32 18 I2_AR2 ActiveIntronRegion 0 14.77 6.69 0.87 0.89 5.25 2.54 13.32 3.52 0.88 4.37 0.00 11.57 0.00 2.03 0.00 1.60 4.95 1.71 0.55 5.03 7.12 3.21 4.86 19 E3_Aa NovelBoundary 0 32.38 3.03 7.07 7.59 19.78 0.00 11.84 10.02 11.52 15.61 0.00 6.30 0.00 5.24 0.00 18.46 28.89 3.44 0.00 5.31 43.74 5.88 13.74 20 ER3a ExonRegion 0 26.15 6.85 9.44 8.95 29.94 6.61 9.02 16.75 24.61 15.26 0.53 14.56 7.68 11.87 4.75 23.29 12.14 21.26 16.93 23.69 52.87 25.94 23.91 21 E3_Da NovelBoundary 0 43.86 9.80 6.42 10.19 12.05 0.00 10.47 13.39 20.63 30.86 0.00 0.00 7.95 7.48 4.45 56.48 17.95 30.05 23.62 8.88 47.26 25.96 54.55 22 E3a_E4a KnownJunction 0 44.30 10.26 7.27 4.06 20.97 0.00 4.11 2.46 16.55 24.07 4.69 0.00 0.00 11.77 0.00 7.52 8.51 14.05 9.51 17.26 37.38 34.05 15.19 23 I3 Intron 0 29.42 6.77 3.78 4.43 19.67 7.17 9.73 10.06 15.01 6.48 0.22 4.53 2.66 6.68 2.45 16.05 10.62 7.17 12.07 7.82 26.83 11.73 22.94 24 I3_SR1 SilentIntronRegion 0 14.66 4.27 3.45 3.83 12.35 4.23 7.50 7.03 10.82 6.10 0.41 2.99 1.62 6.40 2.33 19.96 13.86 4.82 6.69 7.14 31.44 12.68 21.57 25 I3_AR1 ActiveIntronRegion 0 47.73 9.90 4.21 5.20 28.80 10.82 12.55 13.86 20.28 7.01 0.00 6.46 3.96 7.10 2.62 11.43 6.77 10.12 18.78 8.72 21.46 10.68 24.82 26 E4_Aa NovelBoundary 0 46.82 6.71 2.99 14.68 27.16 7.10 23.36 12.86 25.43 4.78 0.00 7.65 6.82 5.18 0.00 14.44 8.98 6.72 4.80 31.32 23.35 11.21 19.72 27 ER4a ExonRegion 0 78.60 29.64 9.14 9.88 44.63 10.33 22.04 21.26 43.48 26.15 2.18 13.34 11.48 22.72 6.60 36.25 21.44 25.06 40.35 27.39 76.14 36.62 43.34 28 E4_Da NovelBoundary 0 3.19 0.00 0.00 9.16 3.23 0.00 8.57 4.31 5.38 3.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 25.14 6.06 7.43 29 E4a_E5a KnownJunction 0 81.79 45.26 3.16 14.35 44.31 12.89 16.08 15.44 51.19 24.55 2.68 19.96 5.68 7.06 8.90 7.35 13.18 21.06 25.32 16.23 59.37 11.39 32.18 30 E4a_E6a NovelJunction 0 14.45 10.06 1.83 1.50 12.73 5.28 2.25 8.87 15.57 11.42 0.00 5.40 0.00 12.13 13.47 18.54 0.00 3.90 4.61 5.56 21.68 8.82 3.33 31 E5_Aa NovelBoundary 0 10.74 0.00 0.00 9.62 0.00 11.58 3.93 1.60 2.84 0.00 0.00 0.00 7.30 0.00 0.00 0.00 0.00 1.58 4.80 0.00 12.05 0.00 8.71 32 ER5a ExonRegion 0 36.39 24.77 5.31 12.89 52.39 11.22 18.54 17.33 39.05 14.07 5.89 24.31 9.04 8.12 7.73 4.73 16.07 14.31 15.85 9.92 48.38 24.20 22.50 33 E5a_E6a KnownJunction 0 31.64 18.09 9.70 10.82 69.27 8.06 14.44 15.57 46.53 19.85 4.32 70.22 6.82 7.18 8.90 3.85 34.41 7.46 16.47 10.87 40.77 10.59 14.68 34 ER6a ExonRegion 0 35.51 21.14 13.17 22.74 41.92 15.62 24.55 21.61 36.68 21.25 0.42 16.63 6.45 8.50 4.75 23.89 19.99 15.91 17.39 26.04 27.41 11.92 26.09 35 IG49_SR2 SilentIntergenicRegion 0 14.24 8.13 5.97 11.24 21.49 9.44 10.13 12.08 15.63 11.62 0.00 9.76 6.08 4.11 2.93 5.48 6.85 4.81 6.98 10.47 3.64 4.80 9.03