Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PIP5K1C Gene 0 72.78 56.53 122.72 72.89 42.53 66.47 30.81 106.35 129.39 129.08 166.69 34.92 31.84 196.31 111.67 222.22 282.46 169.26 102.78 140.98 367.78 142.62 175.17 2 335312 Transcript 0 24.96 25.26 63.23 34.71 19.67 42.21 23.96 74.43 101.79 97.02 143.16 33.48 33.22 160.95 87.84 161.74 250.78 142.94 94.16 135.52 327.66 120.73 140.81 3 ER1a ExonRegion 0 3.64 1.83 0.89 1.02 4.59 6.46 1.70 3.78 7.97 4.54 19.65 1.38 5.40 33.07 14.05 14.80 43.09 4.23 8.90 10.31 46.85 6.04 12.17 4 ER2a ExonRegion 0 10.19 9.79 26.38 13.42 2.68 10.20 5.42 32.08 44.04 29.96 94.71 20.56 30.92 89.23 46.06 63.25 156.17 66.00 48.48 78.19 204.46 51.89 66.63 5 E2a_E3a KnownJunction 0 23.41 16.64 48.28 25.27 3.82 5.79 10.91 49.49 69.91 48.03 103.18 45.31 60.06 126.14 78.25 102.11 196.82 104.38 85.18 109.04 253.16 82.30 117.12 6 ER3a ExonRegion 0 11.47 11.28 54.93 29.90 7.54 13.47 11.22 46.05 92.65 95.32 137.98 35.24 27.48 156.04 101.23 188.33 227.16 152.25 120.08 150.35 307.19 141.37 150.91 7 E3a_E4a KnownJunction 1 0.00 19.60 61.62 29.40 28.44 25.78 8.39 65.68 134.81 118.51 224.90 38.41 20.78 183.88 102.85 123.64 335.39 124.15 74.07 144.90 448.69 92.22 128.30 8 ER4a ExonRegion 0 20.21 19.47 65.50 43.88 21.12 44.14 26.54 66.97 124.43 124.31 194.10 57.51 55.42 157.30 105.60 161.63 308.70 141.33 99.31 156.05 465.71 137.53 144.55 9 E4a_E5a KnownJunction 0 98.46 46.57 86.34 65.76 19.35 64.34 27.34 107.41 163.02 196.66 350.77 87.93 131.32 231.03 184.19 375.37 573.54 251.41 249.51 265.13 631.12 276.04 308.16 10 E5_Aa NovelBoundary 0 25.49 8.49 3.10 0.00 7.30 20.22 12.45 2.09 4.89 3.01 48.64 0.00 0.00 5.06 23.12 58.19 61.71 10.03 42.45 29.53 72.59 18.43 39.18 11 ER5a ExonRegion 0 31.17 22.46 78.69 46.87 9.48 30.24 24.83 89.56 129.24 136.42 202.25 65.57 62.24 231.22 128.52 231.78 370.51 177.51 143.64 188.98 470.25 173.09 187.22 12 E5a_E6a KnownJunction 0 27.49 24.54 64.52 35.59 8.23 38.90 28.31 89.38 119.10 126.71 201.89 54.92 39.61 199.07 134.50 225.92 399.63 148.11 104.85 163.69 480.50 162.02 132.14 13 ER6a ExonRegion 0 23.95 23.41 57.26 38.60 22.02 54.86 24.45 74.74 132.85 128.09 186.43 62.62 67.87 223.56 111.16 225.53 335.16 187.81 134.35 159.48 408.32 134.20 190.69 14 E6a_E7a KnownJunction 0 37.64 38.41 90.24 40.79 17.06 49.12 47.78 95.42 148.32 122.65 194.89 55.67 87.49 290.54 183.08 285.31 348.39 212.95 211.30 206.13 438.31 152.72 239.10 15 ER7a ExonRegion 0 18.42 26.67 69.34 46.11 27.36 48.61 31.46 77.03 128.79 114.05 170.75 43.42 45.85 199.73 102.91 209.07 283.56 204.00 126.85 173.27 390.60 144.65 182.96 16 E7a_E8a KnownJunction 0 29.12 37.76 67.95 56.94 28.69 69.73 26.76 83.42 111.28 108.87 147.09 62.42 46.59 196.30 72.69 126.72 239.92 189.73 82.73 165.74 383.95 174.03 188.74 17 ER8a ExonRegion 0 20.00 22.35 52.65 27.46 22.47 46.05 31.51 51.38 80.27 80.23 113.35 26.23 11.29 174.51 84.25 141.84 223.63 123.23 63.97 143.55 304.03 130.30 147.07 18 E8a_E9a KnownJunction 0 10.37 25.26 74.95 37.22 19.95 35.21 15.37 71.76 112.93 97.70 133.24 12.45 13.64 186.36 99.76 222.25 285.18 138.37 98.73 145.86 304.62 155.72 117.20 19 ER9a ExonRegion 0 18.14 27.38 63.56 22.49 14.30 28.58 22.74 51.83 74.09 66.42 118.55 22.88 19.26 138.94 79.92 139.94 228.70 87.88 67.35 93.19 315.26 119.26 127.95 20 E9a_E10a KnownJunction 1 38.15 34.47 96.45 45.58 25.13 33.67 48.27 82.39 90.07 91.38 195.47 30.16 6.49 176.59 100.87 272.66 271.06 162.12 94.78 156.92 388.39 170.17 222.37 21 ER10a ExonRegion 0 15.85 20.88 89.08 41.75 26.05 36.60 31.29 84.27 115.85 102.12 176.01 25.80 16.85 181.90 87.45 218.42 258.55 141.60 72.22 124.71 366.18 159.20 187.71 22 E10a_E11a KnownJunction 0 12.67 12.43 77.88 43.62 20.88 34.70 44.43 101.95 124.80 104.22 133.45 18.61 26.62 145.39 82.08 144.75 258.91 100.90 58.92 140.17 304.50 119.34 122.41 23 ER11a ExonRegion 0 18.87 23.61 85.23 39.22 36.96 42.63 31.35 95.21 107.11 95.44 158.13 26.79 21.91 184.35 95.23 216.30 289.94 167.47 82.07 136.40 375.64 134.91 153.64 24 E11a_E12a KnownJunction 0 27.78 26.44 96.60 30.33 44.82 94.95 51.32 134.27 95.31 115.80 183.15 24.46 31.82 205.72 89.38 225.07 342.87 219.58 159.44 124.00 428.18 192.03 171.67 25 ER12a ExonRegion 0 17.36 18.57 74.47 24.61 17.68 44.28 20.57 82.58 78.40 91.07 135.48 24.22 27.97 161.87 83.57 179.50 243.15 136.82 79.83 117.32 320.78 124.57 158.93 26 E12a_E13a KnownJunction 0 30.52 25.19 66.29 26.67 11.29 40.77 20.67 95.95 86.66 72.23 145.62 18.91 13.31 172.29 75.78 141.84 262.55 157.52 96.85 146.82 287.33 146.04 152.71 27 ER13a ExonRegion 0 21.39 25.98 44.93 25.22 15.63 43.79 24.87 72.07 72.92 77.73 114.47 19.59 17.28 161.56 72.05 117.88 202.59 100.44 64.88 117.11 273.34 96.56 93.42 28 E13a_E14a KnownJunction 0 20.60 12.50 29.60 22.21 8.49 32.08 8.35 64.98 74.91 62.13 88.50 18.76 27.92 93.47 55.26 55.46 144.37 77.56 43.01 111.15 213.50 50.70 42.94 29 E13a_E15a NovelJunction 1 0.00 0.00 1.83 0.00 3.23 5.79 0.00 0.00 4.86 5.26 10.06 6.15 0.00 14.77 13.23 8.54 50.58 2.03 0.00 0.00 2.66 0.00 7.94 30 ER14a ExonRegion 0 22.51 13.43 37.43 15.45 5.92 40.62 19.86 57.25 77.10 71.56 102.62 28.08 24.16 96.76 63.65 81.06 166.05 92.05 79.05 112.89 297.37 76.08 118.53 31 E14a_E15a KnownJunction 0 44.53 36.84 39.92 18.81 16.38 51.56 35.11 66.75 93.29 77.44 95.71 24.31 20.13 103.24 66.63 101.08 159.33 142.97 115.67 117.93 348.12 104.10 197.19 32 ER15a ExonRegion 0 18.65 23.38 70.41 38.30 17.86 46.51 25.29 85.22 114.43 110.06 158.81 20.41 15.86 223.42 98.17 183.85 287.59 180.52 77.51 141.99 352.78 132.39 148.48 33 E15a_E16a KnownJunction 0 29.04 29.73 69.63 46.71 19.52 57.07 26.54 80.79 147.94 125.26 161.94 33.31 39.28 204.78 101.12 199.61 367.65 188.20 50.35 166.38 417.06 138.39 165.01 34 ER16a ExonRegion 0 17.65 15.89 50.37 24.79 16.70 55.14 16.58 63.26 99.80 103.40 125.26 30.73 36.78 160.47 94.50 136.49 258.56 132.01 101.24 133.27 290.87 89.36 127.80 35 E16_Da NovelBoundary 0 3.78 6.51 31.58 18.91 0.00 2.61 12.01 27.27 28.07 43.11 43.17 6.30 12.82 38.61 27.32 27.43 77.89 116.48 43.77 120.87 32.80 11.08 28.60 36 E16a_E17a KnownJunction 0 6.22 6.05 26.97 24.44 11.04 35.55 7.82 53.89 73.70 78.89 31.11 18.31 20.13 28.72 27.94 21.87 60.31 81.70 28.33 42.25 55.60 20.51 15.54 37 E16a_E18a NovelJunction 0 16.60 0.00 22.83 6.36 12.65 11.07 15.41 12.53 12.70 26.32 129.93 52.97 64.61 194.24 105.07 223.96 265.17 11.81 4.14 0.00 345.34 151.12 148.79 38 Ix Intron 0 7.24 12.14 28.22 14.69 5.42 10.97 7.18 15.59 22.76 27.41 20.89 3.64 4.05 31.17 17.30 31.59 42.09 74.19 45.28 63.23 22.71 8.66 22.36 39 Ix_SR3 SilentIntronRegion 0 9.89 9.08 22.75 14.20 3.01 11.32 6.97 14.08 21.70 32.12 22.49 5.68 8.74 33.48 18.08 32.07 48.81 83.88 44.56 56.48 28.80 8.73 22.20 40 Ix_AR2 ActiveIntronRegion 0 4.62 8.70 20.69 9.47 2.89 5.74 5.23 13.51 18.62 21.67 17.66 2.90 1.72 28.91 15.71 25.71 34.49 66.53 38.19 57.40 18.04 7.06 17.73 41 Ix_SR2 SilentIntronRegion 0 9.76 16.99 39.98 11.30 7.62 18.52 6.04 18.81 31.20 21.82 23.44 0.00 8.72 32.87 16.16 33.20 30.20 70.91 40.76 74.38 19.90 4.19 17.56 42 Ix_AR1 ActiveIntronRegion 0 7.04 14.35 37.25 19.11 8.21 17.70 7.78 24.07 28.52 33.67 30.74 1.65 3.58 35.45 25.66 51.02 54.01 75.13 68.87 83.09 25.29 11.88 31.51 43 Ix_SR1 SilentIntronRegion 0 7.71 15.53 34.16 18.10 7.84 12.92 8.66 16.09 24.79 28.33 20.43 3.73 3.20 30.77 16.54 31.85 42.60 74.93 46.58 66.57 22.70 9.44 24.34 44 ER17a ExonRegion 0 5.67 19.44 31.25 27.60 19.97 42.70 14.69 49.94 82.72 81.85 34.72 17.58 13.62 55.49 21.31 46.81 64.92 110.75 60.45 95.64 66.11 19.92 34.23 45 E17a_E18a KnownJunction 1 6.82 59.07 32.32 22.71 38.37 46.56 6.49 69.05 99.33 85.69 45.54 29.56 12.01 80.76 13.23 53.23 22.63 163.82 105.41 121.95 100.88 35.88 33.55 46 E18_Aa NovelBoundary 0 10.52 12.56 20.70 4.66 8.57 9.26 8.52 9.90 13.45 10.80 50.28 0.00 0.00 53.51 17.80 91.26 80.04 38.72 16.94 18.34 22.05 4.84 28.51 47 ER18a ExonRegion 0 110.67 81.60 167.97 101.43 59.08 84.65 36.25 134.87 152.68 153.77 187.58 36.16 31.96 218.47 129.51 265.87 310.12 190.42 112.27 147.09 400.82 161.30 200.64