Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MEX3D Gene 0 4.58 71.11 110.49 50.86 38.49 61.13 37.36 91.63 52.36 188.15 45.11 2.59 2.73 27.19 8.95 8.73 12.36 118.96 53.57 63.95 87.06 52.10 71.48 2 403287 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 388824 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 402693 Transcript 0 6.71 80.30 38.78 23.30 24.87 60.11 40.91 29.74 16.97 47.68 19.38 2.54 0.03 14.54 5.50 12.98 2.66 68.33 44.27 34.37 44.40 25.82 133.87 5 355663 Transcript 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 2.38 0.00 2.93 0.00 0.00 0.00 2.47 0.00 0.00 0.00 4.15 0.00 0.00 3.09 0.00 0.00 6 IG49 Intergenic 0 1.68 4.77 19.89 3.96 4.79 2.48 2.00 13.41 7.97 7.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.45 15.95 13.87 1.93 0.66 0.58 7 IG49_SR1 SilentIntergenicRegion 0 1.68 4.77 19.90 3.96 4.79 2.48 2.00 13.42 7.98 7.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.46 15.96 13.88 1.93 0.66 0.58 8 ER1a ExonRegion 0 0.00 0.57 0.00 0.00 0.00 1.17 0.00 0.00 0.00 1.02 2.35 0.00 0.00 0.00 0.00 0.83 0.00 2.59 7.26 0.00 15.77 0.58 2.19 9 E1_Ab KnownBoundary 0 0.00 0.00 3.05 0.00 0.00 2.44 0.00 6.20 0.00 6.66 13.06 0.00 0.00 0.00 0.00 0.00 0.00 18.70 3.48 0.00 40.16 0.00 11.69 10 ER1b ExonRegion 0 0.00 0.49 0.00 0.00 0.00 3.49 0.00 0.00 0.00 2.29 10.13 0.00 0.00 0.35 0.00 0.00 4.24 6.97 6.37 0.00 35.14 0.00 6.75 11 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 7.15 0.00 0.00 0.00 2.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.58 0.00 0.00 17.73 0.00 0.00 12 E1a_E1c KnownJunction 0 0.00 2.96 0.00 0.00 0.00 0.00 0.00 2.38 0.00 2.93 0.00 0.00 0.00 2.47 0.00 0.00 0.00 4.15 0.00 0.00 3.09 0.00 0.00 13 ER1c ExonRegion 0 0.44 0.35 2.16 0.02 2.73 12.86 3.88 2.03 1.60 7.81 17.37 0.00 0.00 2.10 1.39 3.03 5.77 26.61 17.99 3.50 36.10 1.39 17.33 14 E1_Ac KnownBoundary 0 3.78 3.35 17.12 1.50 0.00 10.45 11.13 20.29 7.20 35.16 20.69 0.00 0.00 7.18 0.00 0.00 0.00 96.13 48.28 29.27 22.80 16.23 37.90 15 ER1d ExonRegion 0 2.68 23.66 146.60 41.67 8.76 40.86 29.37 83.49 62.37 223.31 57.67 1.92 1.79 32.45 10.28 6.62 16.64 195.74 73.31 100.00 120.43 36.87 67.14 16 E1b_E2a KnownJunction 0 2.96 45.45 382.98 101.39 6.96 102.84 34.45 236.38 166.98 585.51 122.03 0.00 8.28 54.86 20.40 11.02 46.47 533.09 177.70 233.04 242.23 82.48 194.37 17 E2_Aa NovelBoundary 0 3.48 11.91 45.53 13.72 7.72 4.49 14.04 55.86 14.73 19.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.03 16.94 15.53 8.71 0.00 0.00 18 ER2a ExonRegion 0 1.98 21.09 133.89 37.75 14.29 56.61 23.91 97.10 56.52 223.45 58.64 2.10 2.47 34.94 12.07 9.42 16.19 168.72 62.32 76.27 121.71 40.06 64.06 19 E2_Da KnownBoundary 0 0.00 3.35 62.45 14.75 6.79 23.23 6.45 34.95 15.51 44.62 25.59 6.75 0.00 16.25 5.93 0.00 8.51 51.36 18.73 49.73 56.28 11.88 23.30 20 E2a_E2b KnownJunction 0 0.00 29.67 15.55 17.01 15.45 8.57 19.39 21.73 14.73 26.70 9.58 0.00 0.00 0.00 0.00 0.00 0.00 55.67 12.14 8.69 5.19 5.02 4.35 21 E2_Db KnownBoundary 0 3.48 6.64 31.55 11.69 0.00 23.68 6.40 9.20 4.77 13.19 20.79 0.00 0.00 9.71 0.00 3.85 0.00 41.12 4.80 14.76 32.19 6.00 12.04 22 ER2b ExonRegion 0 2.12 4.07 52.17 13.14 3.44 18.60 5.77 23.70 14.56 36.46 29.13 4.33 0.00 19.37 11.61 0.00 6.13 34.58 12.97 43.01 57.45 10.27 18.46 23 ER2c ExonRegion 0 6.71 80.30 38.78 23.30 24.87 60.11 40.91 29.74 16.97 47.68 19.38 2.54 0.03 14.54 5.50 12.98 2.66 68.33 44.27 34.37 44.40 25.82 133.87 24 E2_Ab KnownBoundary 0 20.00 513.66 163.57 126.12 203.48 386.82 246.83 153.08 107.67 255.86 57.96 26.56 6.17 45.74 0.00 75.19 8.42 333.24 194.64 153.59 65.55 151.31 702.28 25 ER2d ExonRegion 0 3.87 215.70 143.90 95.61 134.02 252.81 186.09 131.93 97.72 246.27 52.52 7.84 1.29 28.09 8.50 19.98 16.62 224.53 96.33 71.75 74.66 78.74 239.94 26 E2_Dc KnownBoundary 0 3.11 75.18 158.89 101.32 250.85 286.82 235.56 133.08 83.54 235.23 52.01 6.30 6.66 30.84 10.14 11.02 30.01 107.99 89.23 82.20 125.22 52.35 77.68 27 ER2e ExonRegion 0 12.73 216.74 137.11 115.76 115.51 94.48 75.90 153.01 79.02 254.73 42.38 4.91 6.12 29.51 8.26 10.45 11.45 66.84 55.78 74.62 56.75 118.19 96.46